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Table of Contents

September 2025

The basal bodies are shown in magenta, the TAC in red, the mitochondrial DNA in blue, the mitochondrial membranes in yellow, additional proteins in green and dark red. Jetishi et al. 2025

Image Credit: Markus Gerber

Pearls

The dimorphic fungus Talaromyces marneffei: An opportunistic killer in Southeast Asia

Lottie Brown, Alex Andrianopoulos, Patrick C. Y. Woo, Thuy Le

The devil in more detail: Eco-evolutionary genomics of Tasmanian devil persistence despite range-wide spread of a fatal, transmissible cancer

Andrew Storfer, Marc A. Beer, Dylan Gallinson, Menna E. Jones, Rodrigo Hamede, Hamish McCallum, Mark J. Margres

Reviews

Dendritic cells and HIV transmission: roles and subsets of antigen-presenting cells in the human anogenital tract

Daniel J. Buffa, Thomas R. O’Neil, Erica E. Vine, Lara Sarkawt, Freja A. Warner van Dijk, Oscar A. Dong, Najla Nasr, Anthony L. Cunningham, Kirstie M. Bertram, Andrew N. Harman

Antifungal persistence: Clinical relevance and mechanisms

Rui Wang, Jingnan Lv, Liang Chen, Yanan Zhao, Hong Du

How Klebsiella pneumoniae controls its virulence

To Nguyen Thi Nguyen, Gareth Howells, Francesca L. Short

Research Articles

Identification of a Kingella kingae factor H binding protein that is the major determinant of serum resistance

Kevin A. Hernandez, Eric A. Porsch, Vanessa L. Muñoz, Joseph W. St. Geme III

Spatiotemporal coordination of reovirus peripheral core replication to perinuclear whole virus assembly

Justine Kniert, Dante Terino, Heather E. Eaton, Qi Feng Lin, Shiau-Yin Wu, Hilmar Strickfaden, Maya Shmulevitz

A divergent cyclic nucleotide binding protein promotes Plasmodium ookinete infection of the mosquito

Dominika Kwecka, Zhishuo Wang, Edvardas Eigminas, Lijia Liu, Jennifer C. Regan, Choel Kim, Nisha Philip

Human papillomavirus genomes associate with active host chromatin during persistent viral infection

Alix Warburton, Tovah E. Markowitz, JJ L. Miranda, Kinjal Majumder, Alison A. McBride

Versatile roles of rubredoxin reductase of Pseudomonas aeruginosa TBCF10839 in virulence and stress protection

Lutz Wiehlmann, Thorsten Adams, Claus Urbanke, Sonja Horatzek, Doris Jordan, Ilona Rosenboom, Leo Eberl, Burkhard Tümmler

Glycosylphosphatidylinositol biosynthesis functions as a conserved host defense pathway against coronaviruses via regulation of LY6E

Yanlong Ma, Fei Feng, Hui Feng, Xue Ma, Ziqiao Wang, Yutong Han, Yunkai Zhu, Yuyan Wang, Zhichao Gao, Yuyuan Zhang, Qiang Ding, Jincun Zhao, Rong Zhang

A close unicellular animal relative and predator of schistosomes exhibits chemokinesis in response to proteins and peptides from its prey

Soniya R. Quick, Jason S. Bains, Catherine Gerdt, Bryan Walker, Eleanor B. Goldstone, Theresa Jakuszeit, Andrew W. Baggaley, Ottavio A. Croze, Joseph P. Gerdt

The PP2A-2 holoenzyme orchestrates daughter cell emergence during cytokinesis in Toxoplasma gondii

Jin-Lei Wang, Meng Wang, Nian-Zhang Zhang, Ting-Ting Li, Jin Gao, Xiao-Jing Wu, Bao-Quan Fu, Hany M. Elsheikha, Xing-Quan Zhu

Mycobacterium tuberculosis impairs protective cytokine production via transcription factor MafB manipulation

Hiroyuki Saiga, Masaki Ueno, Toshiki Tamura, Yusuke Tsujimura, Masamitsu N. Asaka, Yumiko Tsukamoto, Tetsu Mukai, Michito Hamada, Satoru Takahashi, Takashi Tanaka, Tsuneyasu Kaisho, Yoshimasa Takahashi, Katsuaki Hoshino, Manabu Ato

Structure-function studies of Vibrio cholerae quorum-sensing receptor CqsR signal recognition

Andrew M. Guarnaccia, Anjali D. Steenhaut, Sandra D. Olenic, Jesse Na, Lark J. Perez, Wai-Leung Ng, Matthew B. Neiditch

Intracellular formate modulates a motility-invasion switch in Salmonella Typhimurium

Debapriya Mukherjee, Salik Noor, Tamoghna Mukherjee, Mahavir Singh, Dipshikha Chakravortty

Divergent resistance pathways amongst SARS-CoV-2 PLpro inhibitors highlight the need for scaffold diversity

Xinyu Wu, Shane M. Devine, Margareta Go, Julie V. Nguyen, Bernadine G. C. Lu, Katie Loi, Nathan W. Kuchel, Kym N. Lowes, Jeffrey P. Mitchell, Guillaume Lessene, David Komander, Matthew E. Call, Melissa J. Call

Genome-wide phenotypic insights into mycobacterial virulence using Drosophila melanogaster

Niruja Sivakumar, Esther Fuentes, Linn-Karina Selvik, Marta Arch, Christina Gabrielsen Ås, Pere-Joan Cardona, Thomas R. Ioerger, Marte Singsås Dragset

Sialic acid serves as a functional receptor for grass carp reovirus

Qian Wang, Zichao Peng, Bin Gui, Yongming Li, Lanjie Liao, Zuoyan Zhu, Yaping Wang, Libo He

Immune signatures of SARS-CoV-2 infection resolution in human lung tissues

Devin Kenney, Aoife K. O’Connell, Anna E. Tseng, Jacquelyn Turcinovic, Maegan L. Sheehan, Adam D. Nitido, Paige Montanaro, Hans P. Gertje, Maria Ericsson, John H. Connor, Vladimir Vrbanac, Nicholas A. Crossland, Christelle Harly, Alejandro B. Balazs, Florian Douam

A dual interaction between RSV NS1 and MED25 ACID domain reshapes antiviral responses

Celia Ait-Mouhoub, Jiawei Dong, Magali Noiray, Jenna Fix, Stepanka Nedvedova, Slim Fourati, Alexis Verger, Jean-Francois Eleouet, Delphyne Descamps, Monika Bajorek, Christina Sizun

Sec10 suppresses antiviral innate immune response by facilitating STUB1-mediated STAT1 degradation

Fachao Sun, Wenqing Ma, Yanan Xu, Luteng He, Xiao Yu, Xingyu Li, Yingying Li, Daniel Chang He, Hongmei Wang, Hongbin He

N460S in PB2 and I163T in nucleoprotein synergistically enhance the viral replication and pathogenicity of influenza B virus

Yang Wang, Yu Gao, Tianxin Ma, Yuting Ye, Chenyang Cao, Binqian Zou, Sulan Ye, Qingsheng Huang, Chunguang Yang, Shengfeng Li, Lixi Liang, Hongxuan Zhou, Zhiqi Zeng, Zifeng Yang, Weiqi Pan

TRIM28 is a target for paramyxovirus V proteins

Gauthier Lieber, Florence Kwaschik, Marie Lork, Nora Schmidt, Benjamin G. Hale

Fexinidazole and Corallopyronin A target Wolbachia-infected sheath cells present in filarial nematodes

Laura Chappell, Ricardo Peguero, William R. Conner, Sommer Fowler, Brandon S. Cooper, Kenneth Pfarr, Achim Hoerauf, Sara Lustigman, Judy Sakanari, William Sullivan

Receptor transporter protein 4 (RTP4)-mediated repression of hepatitis C virus replication in mouse cells

Michael P. Schwoerer, Sebastian Carver, Aaron E. Lin, Jianche Liu, Thomas R. Cafiero, Keith A. Berggren, Serene Dhawan, Saori Suzuki, Brigitte Heller, Celeste Rodriguez, Aoife K. O’Connell, Hans P. Gertje, Nicholas A. Crossland, Alexander Ploss

Activation of PD-1/PD-L1 immune checkpoint by Zika virus

Chenxi Wang, Yubin Xie, Weixin Li, Chon Phin Ong, Hao Ding, Shuofeng Yuan, Gong Cheng, Dong-Yan Jin, Zi-Wei Ye

Discovery and mechanistic insights of dibenzoylmethane as a broad spectrum inhibitor of coronavirus

Yuan Sun, Xiaoyang Shu, Lu Chen, Weijuan Shang, Yumin Zhang, Gengfu Xiao, Leike Zhang

Hnf4α integrates AIF and caspase 3/9 signaling to restrict single and coinfecting pathogens in teleosts

Dong Yan, Min Hui Tao, Xiao Man Wu, Jie Zhang, Ming Li, Ming Xian Chang

Cytotoxic CX3CR1+1 T cells clonally expand in an interplay of CMV, microbiota, and HIV-1 persistence in people on antiretroviral therapy

Nived Collercandy, Camille Vellas, Manon Nayrac, Mary Requena, Thomas Richarme, Anne-Laure Iscache, Justine Latour, Karl Barange, Laurent Alric, Guillaume Martin-Blondel, Matteo Serino, Jacques Izopet, Pierre Delobel

Identification and antiviral mechanism of a novel chicken-derived interferon-related antiviral protein targeting PRDX1

Jing Chen, Peiheng Li, Letian Li, Ju Li, Yuhang Jiang, Wancheng Zou, Pengfei Hao, Zihan Gao, Jiayi Hao, Xiaoshuang Shi, Dongliang Fei, Mingxiao Ma, Guoqing Wang, Chang Li

The Salmonella phage shock protein system is required for defense against host antimicrobial peptides

Marie-Ange Massicotte, Aline A. Fiebig, Andrei Bogza, Brian K. Coombes

Assembly of the mitochondrial outer membrane module of the trypanosomal tripartite attachment complex

Philip Stettler, Salome Aeschlimann, Bernd Schimanski, André Schneider

CK2 derived from brain microvascular endothelial cells induces astrocyte inflammatory response in Escherichia coli-induced meningitis

Dong Huo, Ruicheng Yang, Jiyang Fu, Jiaqi Chen, Chen Tan, Huanchun Chen, Xiangru Wang

Rapid clearance of inducible HIV-1 proviruses after initiation of antiretroviral therapy

Maria C. Puertas, Lucía Bailón, Víctor Urrea, Maria C. García-Guerrero, Yovaninna Alarcón-Soto, Angel Rivero, Beatriz Mothe, José Moltó, Javier Martinez-Picado, on behalf of the DUALITY study group

HIV-1 Tat favors the multiplication of Mycobacterium tuberculosis and Toxoplasma by inhibiting clathrin-mediated endocytosis and autophagy

Aurélie Rivault, Audrey Bernut, Myriam Ben-Neji, Magali Abrantes, Maxime Jansen, Sylvaine Huc-Brandt, Sébastien Besteiro, Yann Bordat, Mai Nguyen-Chi, Nelly Audemard, Margaux Mesleard-Roux, David Perrais, Olivier Neyrolles, Geanncarlo Lugo-Villarino, Christel Vérollet, Lucile Espert, Bruno Beaumelle

Positive allosteric modulation of emodepside sensitive Brugia malayi SLO-1F and Onchocerca volvulus SLO-1A potassium channels by GoSlo-SR-5-69

Mark McHugh, Charity N. Njeshi, Nathaniel Smith, Sudhanva S. Kashyap, Real Datta, Han Sun, Alan P. Robertson, Richard J. Martin

Unbiased and comprehensive identification of virus-derived circular RNAs in a large range of viral species and families

Alexis S. Chasseur, Maxime Bellefroid, Mathilde Galais, Meijiao Gong, Pierre Lombard, Sarah Mathieu, Amandine Pecquet, Estelle Plant, Camille Ponsard, Laure Vreux, Carlo Yague-Sanz, Benjamin G. Dewals, Nicolas A. Gillet, Benoît Muylkens, Carine M. Van Lint, Damien Coupeau

Fish TOLLIP manipulates ATG5 for autophagic degradation of STING to attenuate antiviral interferon responses

Meng-Ze Tian, Yang-Yang Wang, Bao-Jie Cui, Xiao Xu, Chu-Jing Zhou, Can Zhang, Zhuo-Cong Li, Meng-Qian Hong, Na Xu, Dan-Dan Chen, Long-Feng Lu, Shun Li

Coronavirus M protein impairs cilium during early infection by enhancing the AurA-HDAC6 axis

Tenghan Zhuang, Peng Yang, Mengqin Wang, Shiyu Liu, Wei Wang, Boyan Sun, Yue Xu, Li Chen, Xi Bao, Danchen Aaron Yang, Yongqian Zhao, Baochao Fan, Lei Feng, Bin Li

Chimeric PRR T-cell-engager targeting cell surface β-1,3-glucan for invasive candidiasis

Yu Fang Sun, Shi Yu Guo, Si Qi Wang, Rui Tong Li, Xi Ran Qiu, Xing Chen Dong, Shuang Liu, Hui Shen, Mao Mao An

The interaction between GCN2 and eIF2 mediates the resistance of cotton bollworm to the Bacillus thuringiensis Cry1Ac toxin

Caihong Zhang, Jizhen Wei, Ningning Li, Zaw Lin Naing, Ei Thinzar Soe, Jinrong Tang, Huan Yu, Fengyun Fang, Gemei Liang

Differential tissue tropism and transmission efficiency of two dominant influenza D clades with overlapping but distinct receptor binding fine specificities in ferrets

Tirth Uprety, Chithra C. Sreenivasan, Jieshi Yu, Miaoyun Zhao, Runxia Liu, Hai Yu, Ahsan Naveed, Lianne G. Eertink, Shalini Soni, Rebecca E. Ruby, Xi Chen, Radhey S. Kaushik, Zizhang Sheng, Qingsheng Li, Dan Wang, Feng Li

Regulation of host immunity by a novel Legionella pneumophila E3 ubiquitin ligase

Shuxin Liu, Chunlin He, Yong Zhang, Siyao Liu, Tao-Tao Chen, Chunxiuli Li, Dong Chen, Songying Ouyang, Lei Song, Jiaqi Fu, Zhao-Qing Luo

Proximity labelling reveals VPS13C as a regulator of Salmonella-containing vacuole fission

Anna K. Waldmann, Dustin A. Ammendolia, Andrew M. Sydor, Ren Li, Jonathan St-Germain, Brian Raught, John H. Brumell

Related Articles

Connecting basal body and mitochondrial DNA: TAC53 and the tubular organization of the tripartite attachment complex

Clirim Jetishi, Salome Aeschlimann, Bernd Schimanski, Sandro Käser, Rachel Mullner, Silke Oeljeklaus, Bungo Akiyoshi, Bettina Warscheid, Falk Butter, André Schneider, Torsten Ochsenreiter

Single-round infectious rotaviruses with deletions of VP7 or VP4 genes, based on SA11 and WC3 strain backbones, and their potential use as viral vectors

Tomohiro Kotaki, Yuta Kanai, Megumi Onishi, Yusuke Sakai, Daisuke Motooka, Zelin Chen, Yasutaka Enoki, Sayuri Komatsu, Katsuhisa Hirai, Shohei Minami, Takahiro Kawagishi, Hiroshi Ushijima, Takeshi Kobayashi

A single amino acid variant in the variable region I of AAV capsid confers liver detargeting

Ruxiao Xing, Mengyao Xu, Darcy Reil, April Destefano, Mengtian Cui, Nan Liu, Jialing Liang, Guangchao Xu, Li Luo, Meiyu Xu, Fang Zhang, Phillip W.L. Tai, Yuquan Wei, Alisha M. Gruntman, Terence R. Flotte, Guangping Gao, Dan Wang

Pathogen-induced damage in Drosophila: Uncoupling disease tolerance from resistance

Priscilla A. Akyaw, Tânia F. Paulo, Elvira Lafuente, Élio Sucena

Endoplasmic reticulum-anchored nonstructural proteins drive human astrovirus replication organelle formation

Brooke Bengert, Samaneh Mehri, Madeline Holliday, Nicholas J. Lennemann

TisB enables antibiotic tolerance in Salmonella by preventing prophage induction through ATP depletion

Sebastian Braetz, Niclas Nordholt, Andreas Nerlich, Frank Schreiber, Karsten Tedin, Marcus Fulde

CEPR2 perceives group II CEPs to regulate cell surface receptor-mediated immunity in Arabidopsis

Jakub Rzemieniewski, Patricia Zecua-Ramirez, Sebastian Schade, Zeynep Camgöz, Genc Haljiti, Sukhmannpreet Kaur, Christina Ludwig, Ralph Hückelhoven, Martin Stegmann

Interprotomer crosstalk in mosaic viral glycoprotein trimers provides insight into polyvalent immunogen co-assembly

Chengbo Chen, Klaus N. Lovendahl, Julie M. Overbaugh, Kelly K. Lee

The antifungal mechanism of EntV-derived peptides is associated with a reduction in extracellular vesicle release

Giuseppe Buda De Cesare, Melissa R. Cruz, Shane A. Cristy, Luis A. Vega, Robert Zarnowski, Antonino Zito, Shantanu Guha, David R. Andes, Danielle A. Garsin, Michael C. Lorenz

The viral BCL2 protein BHRF1 of Epstein–Barr virus promotes AIM2 inflammasome activation to facilitate lytic replication

Qingping Lan, Xiaolin Zhang, Yifan Sun, Jing Yang, Xiaojuan Li, Ersheng Kuang

The hepatitis E virus capsid protein ORF2 counteracts cell-intrinsic antiviral responses to enable persistent replication in cell culture

Ann-Kathrin Mehnert, Sebastian Stegmaier, Carlos Ramirez Alvarez, Elif Toprak, Vladimir Gonçalves Magalhães, Carla Siebenkotten, Jungen Hu, Ana Luisa Costa, Daniel Kirrmaier, Michael Knop, Xianfang Wu, Thibault Tubiana, Carl Herrmann, Marco Binder, Viet Loan Dao Thi

Monitoring intracellular replication dynamics unveils high proportion of non-replicating antibiotic-tolerant Staphylococcus aureus inside osteoblasts

Florian C. Marro, Jacques Brocard, Allison Faure, Angélique Sion, Paul O. Verhoeven, Laurie Canonne-Desbiolles, Laurence Conraux, Laura Jaffrelot, Chantal Monlong, Ariel J. Blocker, Nelly Dubarry, Frédéric Laurent, Jérôme Josse

T6SS4 is heterogeneously expressed in Yersinia pseudotuberculosis and is a target for transcriptional and post-transcriptional regulation

Anna Kerwien, Britta Körner, Ines Meyer, Yannick Teschke, Cassandra Sophie Köster, Ileana Paula Salto, Petra Dersch, Anne-Sophie Herbrüggen

In vivo and in vitro recombinant systems of a novel variant demonstrate cross-reactive neutralization for the HCV model virus, Norway rat hepacivirus

Caroline E. Thorselius, Andreas Kok, Raphael Wolfisberg, Ulrik Fahnøe, Matthew J. Kennedy, Emma A. Lundsgaard, Lotte Mikkelsen, Mads K. Larsen, Satyapramod Murthy, Sheetal Trivedi, Amit Kapoor, Troels K. H. Scheel, Kenn Holmbeck, Jens Bukh

STK-mediated FadR phosphorylation regulates the acid resistance and virulence of Streptococcus suis

Sen Li, Zhe Ma, Huixing Lin, Fei Pan, Hong Zhou, Jinsheng Tang, Hongjie Fan

Defined roles for the Staphylococcus aureus POT transporter DtpT in di/tripeptide uptake and glutathione utilisation inside human macrophages

Imran Khan, Sandy J. MacDonald, Sigurbjörn Markússon, Paige J. Kies, Cristina Kraemer-Zimpel, Callum Robson, Joanne L. Parker, Simon Newstead, Dave Boucher, Neal D. Hammer, Marjan Van Der Woude, Gavin H. Thomas

Liver biopsies obtained throughout SIV infection reveal evolving interferon stimulated protein expression within distinct monocyte/macrophage subsets

Nina Derby, Brooke I. Johnson, Sreya Biswas, Miranda Fischer, Katherine A. Fancher, Cristina Luevano-Santos, Sofiya Yusova, Kimberly A. Meyer, Yohannes M. Abraham, Savannah S. Lutz, Cole Fisher, Maria Cristina Pacheco, Jeremy V. Smedley, Benjamin J. Burwitz, Donald L. Sodora

Variation in natural infection outcomes and cancer cell release from soft-shell clams (Mya arenaria) with bivalve transmissible neoplasia

Rachael M. Giersch, Jordana K. Sevigny, Sydney A. Weinandt, Carissa Mayo, Fiona E. S. Garrett, Karyn Tindbaek, Marisa A. Yonemitsu, Samuel F. M. Hart, Michael J. Metzger

The tegument protein VP22 of pseudorabies virus inhibits cGAS condensation by inducing nuclear-to-cytoplasmic translocation of DDX21

Kesen Liu, Wandi Cao, Hanhua Zhang, Xingmiao Yang, Chengyue Wu, Xingya Wang, Qian Sun, Jianxiong Guo, Ting Zhang, Yan Liu, Xing Liu

Acinetobacter phages use distinct strategies to breach the capsule barrier

Alexis J. McCalla, Forrest C. Walker, Fabiana Bisaro, Miguel Rodriguez-Anavitate, Anna Johannesman, Gisela Di Venanzio, Mario F. Feldman, Michele LeRoux

Antigenic variation is caused by long plasmid segment conversion in a hard tick-borne relapsing fever Borrelia miyamotoi

Tomohi Takeuchi, Yasuhiro Gotoh, Tetsuya Hayashi, Hiroki Kawabata, Ai Takano

Commensal to pathogen switch in Streptococcus pneumoniae is influenced by a thermosensing master regulator

Shruti Apte, Greicy K. Bonifacio-Pereira, Sourav Ghosh, Srijit Kumar Mandal, Leena Badgujar, Krithika Gosavi, Elizabeth Pohler, Thomas E. Barton, Sian Pottenger, Alice Blake, Pradeepkumar PI, Daniel R. Neill, Anirban Banerjee

Short Reports

The association of class II HLA alleles with tuberculosis-associated immune reconstitution inflammatory syndrome

Phuti Choshi, Sarah Pedretti, Tafadzwa Chimbetete, Rama Gangula, Muki Shey, Cari Stek, Rachel P. J. Lai, Robert Wilkinson, Graeme Meintjes, Elizabeth Phillips, Jonny Peter