Citation: Alonso-Monge R, Gresnigt MS, Román E, Hube B, Pla J (2021) Candida albicans colonization of the gastrointestinal tract: A double-edged sword. PLoS Pathog 17(7): e1009710. https://doi.org/10.1371/journal.ppat.1009710
Editor: Dan Jarosz, Stanford University, UNITED STATES
Published: July 22, 2021
Copyright: © 2021 Alonso-Monge et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Funding: This research was funded by Grant PGC2018-095047-B-I00 from Ministerio de Ciencia e Innovación and InGEMICS (B2017/BMD-3691) from Comunidad de Madrid CAM to JP; German Research Foundation (Deutsche Forschungsgemeinschaft - DFG) Emmy Noether Program (Project no.434385622 / GR5617/1-1) to MG; Cluster of Excellence “Balance of the Microverse”, funded by the DFG under Germany's Excellence Strategy – EXC 2051 – Project-ID 390713860, DFG project Hu 532/20-1, project C1 within the Collaborative Research Centre (CRC)/Transregio (TRR) 124 FungiNet, European Union Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant agreement No 812969 (FunHoMic) to BH. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Competing interests: The authors have declared that no competing interests exist.
Candida albicans is not only a common commensal of the vaginal and gastrointestinal tract (GIT) of humans, but also an important cause of infections worldwide and is therefore considered an opportunistic pathogen. C. albicans can cause superficial but also more severe, frequently life-threatening, systemic infections. The latter may occur when the microbiota is disturbed and immune defenses are compromised, thus allowing the dissemination of the fungus from commensal pools, in particular the GIT, to vital organs. Therefore, gastrointestinal C. albicans colonization can be seen as a predisposing factor of life-threatening infections. However, recent evidence indicates that commensal coexistence of C. albicans with the human host is not only detrimental. In fact, beneficial effects of C. albicans colonization to human health, most likely, have been an evolutionary pressure for its establishment as a commensal. Here, we review recent studies that demonstrate both beneficial and detrimental effects of this pathobiont to human health upon colonization of the human gut.
Is the gut a source for C. albicans systemic infections?
Different studies suggested that the gut is the main reservoir from which C. albicans can translocate through the intestinal barrier causing blood stream infections (BSIs) . Immunocompromised animals or those with disrupted intestinal barriers can develop BSI leading to dissemination, colonization of vital organs, and death. Molecular typing studies have demonstrated that systemic infections originate from the gastrointestinal tract (GIT) . Genetic similarity between C. albicans blood isolates and the corresponding strains isolated from stools was found in systemically infected patients . A comparative analysis of the mycobiota in fecal and blood samples from allogenic hematopoietic cell transplant patients has revealed an expansion of the intestinal Candida species prior to dissemination . In fact, the majority of intensive care unit (ICU) patients, a major risk group for systemic Candida infections, seem to show increased sizes of certain Candida populations in the gut . Therefore, microbial dysbiosis and Candida overgrowth in the gut can be considered a risk and a source for systemic candidiasis, besides catheter-derived nosocomial candidemia.
Is intestinal C. albicans colonization responsible for specific human pathologies?
Since most of the human population is colonized by C. albicans, a colonization of the gut per se can be considered as normal. However, in certain cases, C. albicans colonization has been associated with intestinal pathologies (Fig 1). Crohn disease (CD), an inflammatory bowel disease (IBD), has long been suspected to arise from inappropriate immune responses to the intestinal microbiota, and compelling evidence indicates that the mycobiota plays an essential role in its etiology. CD patients have elevated antibodies against fungal cell wall sugars (originally called anti-Saccharomyces cerevisiae or ASCA antibodies) that can recognize C. albicans. Additionally, C. albicans is more frequently isolated from stools of CD patients (see  for a review). Intestinal CX3CR1+ monocytes mediate specific antifungal responses, and a CX3CR1 polymorphism (T280M) is associated with reduced ASCA levels and impaired immunoglobulin G (IgG) responses against commensal fungi in humans . Also, ulcerative colitis patients colonized with C. albicans experience delayed recovery, and both antifungal therapy and probiotic treatment ameliorate their symptoms .
C. albicans inhabits the intestinal tract with other fungal and bacterial microbiota, preferably as a yeast form, in healthy individuals. Alteration of this equilibrium (caused by immunological defects, use of broad-spectrum antibiotics, barrier damage, etc.) can lead to dysbiosis. C. albicans can then translocate from the gut lumen and invade the intestinal mucosa, getting access to blood vessels and causing systemic infections. The presence of C. albicans as a harmless intestinal commensal, however, induces TH17 mediated responses. Neutrophils are attracted to the intestinal mucosa playing a protective role against other pathogens such as Clostridioides difficile. This TH17 response can exacerbate inflammation in IBD patients or aggravate allergic symptoms to Aspergillus fumigatus. CX3CR1+ CARD9+ macrophages mediate induction of B cell responses that generate anti-Candida antibodies that protect the host from other fungal systemic infections. A protection against potentially pathogenic fungi or bacteria such as Staphylococcus aureus or Acinetobacter baumanii has also been reported, indicating cross-kingdom protection. Ab, antibody; IBD, inflammatory bowel disease; IL-17, interleukin 17.
Recent evidence suggests that intestinal C. albicans colonization can influence certain nonintestinal pathologies. For example, C. albicans is a potent inducer of TH17 responses, which may be beneficial in the gut, but this response also causes the expansion of CD4+ T cells cross-reactive to Aspergillus fumigatus antigens  or house dust mite extract  causing immunopathology in the lung . Interestingly, CD patients have increased numbers of these cells that are also increased in patients with asthma, chronic obstructive pulmonary disease, and cystic fibrosis. The interaction of intestinal immune cells with C. albicans can exacerbate pulmonary inflammatory responses against airborne fungi or allergens and is believed to contribute to the pathology of certain allergic airway diseases. Different studies propose a connection between C. albicans colonization and other pathologies, but whether fungal dysbiosis is a consequence or a cause of these pathologies remains to be determined.
Does C. albicans gut colonization have beneficial effects for the host?
Although the correlation between C. albicans gut colonization and disseminated candidiasis has long been known, potential advantages of harboring this fungus as a commensal in the mycobiome has been discussed more recently (Fig 1). For example, C. albicans colonization has been shown to have a beneficial effect in Clostridioides difficile infection . Colonization of C. albicans may also contribute to protective effects against blood-borne microbial infections as it drives the expansion of TH17 CD4+ cells that stimulate the responsiveness of circulating neutrophils . Mice colonized with C. albicans demonstrated increased resistance against intravenous challenge with C. albicans . This occurs via innate immune mechanisms that, interestingly, also increase resistance against other fungal (A. fumigatus) and bacterial (Staphylococcus aureus and Pseudomonas aeruginosa) infections . Fungal gastrointestinal colonization (the mycobiota) has recently been shown to induce antifungal IgG responses, protecting mice against infection with C. albicans or Candida auris . Therefore, the commensal C. albicans pool seems to play a role in generating protective immunity against C. albicans infections, but also other pathogens. Certain C. albicans antigens such as, for example, Hyr1, promote cross-kingdom protection against Acinetobacter baumanii infections  reinforcing the idea of benefits underlying gut colonization.
Is there a preferred morphology associated with gut colonization?
C. albicans grows as one of two main morphologies, yeast or hyphae. A specific type of cells (called GUT) has been generated in vivo in the mouse gut under specific conditions  and is proposed as a commensalism-specific morphotype.
The hyphal morphology is well known to be more associated with host cell invasion and damage. Although yeast cells are more frequently found in the mouse intestine compared to hyphae, a recent study suggests the existence of both morphologies in the gut . However, several studies have shown that the hyphal form seems to be detrimental for gut colonization. For example, experimental evolution selected mutants with hyphal defects after several rounds of gut colonization . Furthermore, transcription factors that promote C. albicans persistence in gnotobiotic mice regulate yeast versus hyphal formation . Genetically engineered strains either locked in the hyphal form or producing hypha in vivo show reduced intestinal colonization [19,20], and Ume6, a positive regulator of filamentation, inhibits colonization . All these data suggest that hyphal formation does not support gut colonization. However, since both morphologies are found in the gut and most clinical isolates have the potential to produce hyphae, there must be at least a transient selective advantage for hyphal production. Mechanisms underlying these processes could implicate microbiota and/or host responses in the control of fungal morphology. The existence of other niches within the host (e.g., oral cavity) where evolution may have a different impact on C. albicans morphology  could also partially explain these observations.
Is a Candida vaccine needed?
Patients with Candida infections due to an impaired immune response or inefficient recognition of Candida cells may benefit from a Candida vaccine. Vaccination can augment specific host defenses to compensate for a suboptimal or partially defective anti-Candida host defense. However, vaccines may be less effective for severely immunocompromised patients at risk for candidiasis due to compromised antigen presentation as well as a B and T cell–driven immunity. Finally, it is difficult to predict how increasing host immunity to Candida through vaccination would impact diseases associated with strong Candida-specific immunity. Vaccination may augment the Candida-specific TH17 and antibody-mediated immune responses that, as discussed above, can play a role in pulmonary inflammatory pathology and IBDs.
Given the potential beneficial role of C. albicans commensalism, vaccination may negatively impact these beneficial effects by compromising intestinal colonization. A viable strategy circumventing commensalism may be the neutralization of specific virulence factors by passive immunization. Since the currently developed vaccines specifically target hyphal proteins, they may not necessarily impact C. albicans colonization. In fact, by specifically targeting the filamentous infectious morphology, these vaccines may even reinforce commensalism. However, at this stage, we do not understand which fungal factors or activities trigger the beneficial effects, and the hyphal morphology may also play a role during commensalism, and, thus, effects of hyphae-specific vaccination on colonization remain to be elucidated. Other vaccine designs such as a multivalent vaccine against C. albicans or immunization with inactivated yeast cells may also induce potent responses against yeast cells and thereby compromise the commensal state. Nevertheless, with currently only one vaccine in clinical trials for vulvovaginal candidiasis , it is unlikely that we will obtain insights into the effect of anti-Candida vaccination on intestinal commensalism and human health in the near future. Furthermore, it remains to be investigated which mechanisms cause the detrimental effects associated with C. albicans gut colonization and immunopathology at other body sites.
Given the parallel evolutionary history of C. albicans and humans and the fact that a potential harmful fungus would be subjected to negative selection, it was predicted that intestinal colonization with this yeast may have beneficial effects. It has become clear that colonization triggers a set of immunological mechanisms that either contribute to diseases such as IBDs and asthma or drive protective innate and adaptive immune responses, largely depending on the extent, timing, and nature of the response. Many studies use mice as a model organism, yet caution must be taken in their interpretation since C. albicans is not a normal commensal of many laboratory mice and important differences between the murine and human immune system exist. However, a key message is that C. albicans can elicit protective immunity against C. albicans infections, but also other fungi and bacteria. The studies discussed here suggest that C. albicans should be considered as a therapeutic target in the treatment of IBDs and to prevent C. albicans infections, but also as a potent vehicle to promote immunization against other pathogens.
- 1. Nucci M, Anaissie E. Revisiting the source of candidemia: skin or gut? Clin Infect Dis. 2001;33(12):1959–67. pmid:11702290.
- 2. Marco F, Lockhart SR, Pfaller MA, Pujol C, Rangel-Frausto MS, Wiblin T, et al. Elucidating the origins of nosocomial infections with Candida albicans by DNA fingerprinting with the complex probe Ca3. J Clin Microbiol. 1999;37(9):2817–28. Epub 1999/08/17. pmid:10449459; PubMed Central PMCID: PMC85387.
- 3. Miranda LN, van der IM, Costa SF, Sousa AP, Sienra RA, Gobara S, et al. Candida colonisation as a source for candidaemia. J Hosp Infect. 2009;72(1):9–16. pmid:19303662
- 4. Zhai B, Ola M, Rolling T, Tosini NL, Joshowitz S, Littmann ER, et al. High-resolution mycobiota analysis reveals dynamic intestinal translocation preceding invasive candidiasis. Nat Med. 2020;26(1):59–64. Epub 2020/01/08. pmid:31907459; PubMed Central PMCID: PMC7005909.
- 5. Zaborin A, Smith D, Garfield K, Quensen J, Shakhsheer B, Kade M, et al. Membership and behavior of ultra-low-diversity pathogen communities present in the gut of humans during prolonged critical illness. mBio. 2014;5(5):e01361–14. Epub 2014/09/25. pmid:25249279; PubMed Central PMCID: PMC4173762.
- 6. Gerard R, Sendid B, Colombel JF, Poulain D, Jouault T. An immunological link between Candida albicans colonization and Crohn’s disease. Crit Rev Microbiol. 2015;41(2):135–9. Epub 2013/07/17. pmid:23855357.
- 7. Leonardi I, Li X, Semon A, Li D, Doron I, Putzel G, et al. CX3CR1(+) mononuclear phagocytes control immunity to intestinal fungi. Science. 2018;359(6372):232–6. Epub 2018/01/13. pmid:29326275.
- 8. Zwolinska-Wcislo M, Brzozowski T, Budak A, Kwiecien S, Sliwowski Z, Drozdowicz D, et al. Effect of Candida colonization on human ulcerative colitis and the healing of inflammatory changes of the colon in the experimental model of colitis ulcerosa. J Physiol Pharmacol. 2009;60(1):107–18. Epub 2009/05/15. pmid:19439813.
- 9. Bacher P, Hohnstein T, Beerbaum E, Röcker M, Blango MG, Kaufmann S, et al. Human Anti-fungal Th17 Immunity and Pathology Rely on Cross-Reactivity against Candida albicans. Cell. 2019;176(6):1340–55.e15. Epub 2019/02/26. pmid:30799037.
- 10. Shao TY, Ang WXG, Jiang TT, Huang FS, Andersen H, Kinder JM, et al. Commensal Candida albicans Positively Calibrates Systemic Th17 Immunological Responses. Cell Host Microbe. 2019;25(3):404–17.e6. Epub 2019/03/15. pmid:30870622; PubMed Central PMCID: PMC6419754.
- 11. Markey L, Shaban L, Green ER, Lemon KP, Mecsas J, Kumamoto CA. Pre-colonization with the commensal fungus Candida albicans reduces murine susceptibility to Clostridium difficile infection. Gut Microbes. 2018:1–13. Epub 2018/04/19. pmid:29667487.
- 12. Huertas B, Prieto D, Pitarch A, Gil C, Pla J, Diez-Orejas R. Serum Antibody Profile during Colonization of the Mouse Gut by Candida albicans: Relevance for Protection during Systemic Infection. J Proteome Res. 2017;16(1):335–45. pmid:27539120.
- 13. Tso GHW, Reales-Calderon JA, Tan ASM, Sem X, Le GTT, Tan TG, et al. Experimental evolution of a fungal pathogen into a gut symbiont. Science. 2018;362(6414):589–95. Epub 2018/11/06. pmid:30385579.
- 14. Doron I, Leonardi I, Li XV, Fiers WD, Semon A, Bialt-DeCelie M, et al. Human gut mycobiota tune immunity via CARD9-dependent induction of anti-fungal IgG antibodies. Cell. 2021;184(4):1017–31 e14. Epub 2021/02/07. pmid:33548172; PubMed Central PMCID: PMC7936855.
- 15. Uppuluri P, Lin L, Alqarihi A, Luo G, Youssef EG, Alkhazraji S, et al. The Hyr1 protein from the fungus Candida albicans is a cross kingdom immunotherapeutic target for Acinetobacter bacterial infection. PLoS Pathog. 2018;14(5):e1007056. Epub 2018/05/11. pmid:29746596; PubMed Central PMCID: PMC5963808.
- 16. Pande K, Chen C, Noble SM. Passage through the mammalian gut triggers a phenotypic switch that promotes Candida albicans commensalism. Nat Genet. 2013;45(9):1088–91. pmid:23892606
- 17. Witchley JN, Penumetcha P, Abon NV, Woolford CA, Mitchell AP, Noble SM. Candida albicans Morphogenesis Programs Control the Balance between Gut Commensalism and Invasive Infection. Cell Host Microbe. 2019;25(3):432–43 e6. Epub 2019/03/15. pmid:30870623; PubMed Central PMCID: PMC6581065.
- 18. Bohm L, Torsin S, Tint SH, Eckstein MT, Ludwig T, Perez JC. The yeast form of the fungus Candida albicans promotes persistence in the gut of gnotobiotic mice. PLoS Pathog. 2017;13(10):e1006699. Epub 2017/10/27. pmid:29069103; PubMed Central PMCID: PMC5673237.
- 19. Vautier S, Drummond RA, Chen K, Murray GI, Kadosh D, Brown AJ, et al. Candida albicans colonization and dissemination from the murine gastrointestinal tract: the influence of morphology and Th17 immunity. Cell Microbiol. 2015;17(4):445–50. pmid:25346172; PubMed Central PMCID: PMC4409086.
- 20. Román E, Huertas B, Prieto D, Diez-Orejas R, Pla J. TUP1-mediated filamentation in Candida albicans leads to inability to colonize the mouse gut. Future Microbiol. 2018;13:857–67. Epub 2018/06/08. pmid:29877100.
- 21. Pérez JC. Candida albicans dwelling in the mammalian gut. Curr Opin Microbiol. 2019;52:41–6. Epub 2019/05/28. pmid:31132744.
- 22. Edwards JE Jr., Schwartz MM, Schmidt CS, Sobel JD, Nyirjesy P, Schodel F, et al. A Fungal Immunotherapeutic Vaccine (NDV-3A) for Treatment of Recurrent Vulvovaginal Candidiasis-A Phase 2 Randomized, Double-Blind, Placebo-Controlled Trial. Clin Infect Dis. 2018;66(12):1928–36. Epub 2018/04/27. pmid:29697768; PubMed Central PMCID: PMC5982716.