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Aging boosts antiviral CD8+T cell memory through improvedengagement of diversified recall response determinants

  • Bennett Davenport,

    Roles Conceptualization, Data curation, Formal analysis, Investigation, Project administration, Validation, Visualization

    Affiliations Department of Anesthesiology & Barbara Davis Center for Childhood Diabetes, University of Colorado Denver, Aurora, Colorado, United States of America, Integrated Department of Immunology, University of Colorado Denver and National Jewish Health, Denver, Colorado, United States of America, Diabetes, Obesity & Metabolism Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America

  • Jens Eberlein,

    Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization

    Affiliation Department of Anesthesiology & Barbara Davis Center for Childhood Diabetes, University of Colorado Denver, Aurora, Colorado, United States of America

  • Tom T. Nguyen,

    Roles Investigation

    Affiliation Department of Anesthesiology & Barbara Davis Center for Childhood Diabetes, University of Colorado Denver, Aurora, Colorado, United States of America

  • Francisco Victorino,

    Roles Investigation

    Affiliations Department of Anesthesiology & Barbara Davis Center for Childhood Diabetes, University of Colorado Denver, Aurora, Colorado, United States of America, Integrated Department of Immunology, University of Colorado Denver and National Jewish Health, Denver, Colorado, United States of America

  • Kevin Jhun,

    Roles Investigation, Validation

    Affiliations Diabetes, Obesity & Metabolism Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America

  • Haedar Abuirqeba,

    Roles Investigation

    Affiliations Diabetes, Obesity & Metabolism Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America

  • Verena van der Heide,

    Roles Conceptualization, Formal analysis, Investigation, Validation, Visualization

    Affiliations Diabetes, Obesity & Metabolism Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America

  • Peter Heeger,

    Roles Conceptualization, Writing – review & editing

    Affiliation Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America

  • Dirk Homann

    Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

    dirk.homann@mssm.edu

    Affiliations Department of Anesthesiology & Barbara Davis Center for Childhood Diabetes, University of Colorado Denver, Aurora, Colorado, United States of America, Integrated Department of Immunology, University of Colorado Denver and National Jewish Health, Denver, Colorado, United States of America, Diabetes, Obesity & Metabolism Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America

Aging boosts antiviral CD8+T cell memory through improvedengagement of diversified recall response determinants

  • Bennett Davenport, 
  • Jens Eberlein, 
  • Tom T. Nguyen, 
  • Francisco Victorino, 
  • Kevin Jhun, 
  • Haedar Abuirqeba, 
  • Verena van der Heide, 
  • Peter Heeger, 
  • Dirk Homann
PLOS
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This is an uncorrected proof.

Abstract

The determinants of protective CD8+ memory T cell (CD8+TM) immunity remain incompletely defined and may in fact constitute an evolving agency as aging CD8+TM progressively acquire enhanced rather than impaired recall capacities. Here, we show that old as compared to young antiviral CD8+TM more effectively harness disparate molecular processes (cytokine signaling, trafficking, effector functions, and co-stimulation/inhibition) that in concert confer greater secondary reactivity. The relative reliance on these pathways is contingent on the nature of the secondary challenge (greater for chronic than acute viral infections) and over time, aging CD8+TM re-establish a dependence on the same accessory signals required for effective priming of naïve CD8+T cells in the first place. Thus, our findings reveal a temporal regulation of complementary recall response determinants that is consistent with the recently proposed “rebound model” according to which aging CD8+TM properties are gradually aligned with those of naïve CD8+T cells; our identification of a broadly diversified collection of immunomodulatory targets may further provide a foundation for the potential therapeutic “tuning” of CD8+TM immunity.

Author summary

Immune protection provided by antiviral memory T cells relies in part on their capacity for prodigious proliferative expansion in the context of a re-infection, a proficiency that, perhaps surprisingly, is augmented rather than curtailed as memory T cells progress with age. In the present work, which draws on emerging evidence that T cell memory is not a stable trait but a progressively evolving property, we have begun to elucidate the mechanistic foundations for this age-associated amplification of memory T cell recall potential. Altogether, aged in comparison to young memory T cells more effectively engage multiple distinct stimulatory pathways and better eschew restraints exercised by inhibitory interactions. In this regard aged memory T cells resemble naïve T cells that depend on much of the same accessory signals to mount potent primary T cell responses. Our findings therefore provide further support for the “rebound model” of memory T cell maturation according to which aging memory T cell properties are progressively aligned with those of naïve T cells; they reveal a fundamentally temporal contingency of recall responses on the integrated activity of highly diversified molecular cues; and they identify a set of disparate targets for potential T cell-focused therapeutic interventions.

Introduction

What does it take for pathogen-specific CD8+ memory T cells (CD8+TM) to mount an efficient and protective recall response? In most general terms, the efficacy of a secondary (IIo) CD8+ effector T cell (CD8+TE) response is contingent on the numbers of available CD8+TM, their differentiation status and anatomical distribution, the contribution of other immune cell populations (e.g., CD4+T cells, B cells, innate immune cells), and the precise conditions of pathogen re-encounter, i.e. the nature of the pathogen as well as the route and dosage of infection. Thus, the specific constraints of experimental or naturally occurring pathogen exposure will dictate relevant outcomes that are predictable only in as much as the relative contribution of individual biological parameters are sufficiently understood, a task much complicated by the considerable combinatorial possibilities that ultimately shape the balance of pathogen replication and control, pathogen-induced damage, immunopathology, tissue protection and repair. Simply put, CD8+TM-mediated immune protection is eminently context-dependent.

The difficulties associated with attempts to define more generally applicable rules for the phenomenon of protective CD8+TM immunity are perhaps best illustrated by the “effector/central memory T cell” paradigm (TEM and TCM, respectively) that constitutes one of the most widely employed and consequential distinctions in the field of memory T cell research [1]. The analytical and physical separation according to CD62L (and CCR7) expression status has spawned an extraordinary amount of work that has assigned numerous distinctive, and at times seemingly contradictory, properties to CD62Llo CD8+TEM and CD62Lhi CD8+TCM subsets [24]. The CD8+TM populations thus defined, however, are very much a moving target. For example, CD62L expression by peripheral CD8+TM generated in response to an acute pathogen challenge is progressively enhanced as a function of original priming conditions and infection history; upon entry into certain lymphoid or nonlymphoid tissues, CD8+TM-expressed CD62L is reduced; and CD8+TEM and TCM subsets themselves are subject to gradual adaptations that introduce an array of molecular, phenotypic and functional changes including, importantly, an increase of their respective recall capacities [2, 510]. Thus, both CD62Llo and CD62Lhi CD8+T cell populations exhibit a broad spectrum of dynamically regulated properties that cannot be captured by the simple phenomenological distinction of TEM and TCM subsets. Most recently, D. Busch’s group used an elegant serial adoptive transfer system in which single Io, IIo or IIIo L. monocytogenes- (LM-) specific CD8+TCM (i.e., CD8+TCM established after a Io, IIo or IIIo LM challenge) gave rise to recall responses of comparable size, phenotypic and functional diversity, and protective capacity [11, 12]. Since single CD8+TEM failed to mount a similar response, these studies provide definitive proof that the CD62Lhi CD8+TCM subset harbors greater recall potential [11, 12] yet CD62L itself is apparently dispensable for an effective LM-specific recall response [13]. In some other model systems, enhanced protection was even afforded by CD8+TEM, their limited proliferative potential notwithstanding [24]. It is therefore imperative to define, beyond the TEM/TCM paradigm, which exact mechanisms contribute to the regulation of effective CD8+TM recall activity under varied experimental conditions, and to what extent specific molecular pathways may become a dominant force in a given model system. A synthesis of such efforts may then provide a foundation for the formulation of more general rules of CD8+TM engagement.

In the present work, we took advantage of our observation that aging CD8+TM specific for lymphocytic choriomeningitis virus (LCMV) gradually acquire unique molecular, phenotypic and functional signatures that are associated with a capacity for more vigorous IIo CD8+TE responses and improved immune protection [9]. We have further organized these dynamic changes in the “rebound model” of extended CD8+TM maturation according to which pertinent properties of aging CD8+TM are progressively aligned, perhaps surprisingly, with those of naïve CD8+TN populations [9, 10]. Here, by focusing on a diverse set of co-stimulatory and inhibitory, cytokine, chemokine and homing receptors/ligands differentially expressed by old and young CD8+TM as well as their distinct effector function profiles [9], we identified a broad array of mechanisms that “tune” CD8+TM recall reactivity to an acute and/or chronic viral re-challenge, and that specifically support the greater IIo CD8+TE expansions of aged CD8+TM populations. Collectively, our results demonstrate a novel temporal contingency of recall response determinants, and we propose in particular that aging CD8+TM re-acquire a dependence on multiple accessory pathways for optimization of their IIo CD8+TE reactivity that were essential for the effective and efficient priming of naïve CD8+TN in the first place.

Results

Interrogating CD8+TM recall responses: The mixed adoptive transfer/re-challenge (AT/RC) system

To identify the mechanisms regulating the differential recall reactivity of young and old antiviral CD8+TM, we employed a mixed “adoptive transfer/re-challenge” (AT/RC) system described in ref.[9]. In brief, cohorts of young adult mice congenic at the CD45 or CD90 locus were challenged with LCMV (2x105 pfu LCMV Armstrong [Arm] i.p.) and allowed to establish LCMV-specific CD8+T cell memory. By performing viral infections in a staggered fashion, we generated groups of young (~2 months after challenge) and aged (>15 months after infection) LCMV-immune mice that served as donors for a concurrent interrogation of young and old CD8+T cell memory. To this end, CD8+TM populations were enriched from the congenic donors, combined at a ratio of 1:1 at the level of CD8+TM specific for the immunodominant LCMV nucleoprotein (NP) determinant NP396–404 (DbNP396+CD8+TM), and injected into congenic recipients that were subsequently inoculated with LCMV; the respective expansions of young vs. old DbNP396+CD8+TM-derived IIo CD8+TE populations were then quantified eight days later (Fig 1A).

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Fig 1. No role for IL-7, TSLP or IL-15 in the differential regulation of young and old IIo CD8+TE expansions.

A., basic design of mixed AT/RC experiments. CD8+T cells from congenic young and old LCMV-immune donors were enriched, combined 1:1 at the level of DbNP396+CD8+TM, and transferred i.v. into recipients that were subsequently challenged using “acute” (LCMV Arm) or “chronic” (LCMV cl13) infection protocols; proliferative expansions of IIo DbNP396+CD8+TE were quantified 8 days later. Note that the constellation of congenic markers permits the distinction of young and old IIo CD8+TE as well as Io CD8+TE generated by the host. Unless noted otherwise, treatment with blocking antibodies was performed ~2h before AT and on d2 and d4 after virus inoculation; in other cases, B6 vs. immunodeficient recipients were used. B., quantification of IIo CD8+TE expansions under conditions of control (PBS) or combined αIL-7/αIL-7Ra treatment and LCMV Arm challenge; the age of donor CD8+TM is indicated in the legend (young: d50, old: d518) C., similar experiments as in panel B but conducted with LCMV cl13 and control treatment with rat IgG (donor ages indicated in legend). D., mixed AT/RC experiments performed with B6 vs. B6.IL-15-/- recipients (AT of 2x103 [panel B & D] or 10x103 [panel C] young and old DbNP396+CD8+TM each; n≥3 mice/group; asterisks indicate significant differences comparing young and old IIo DbNP396+CD8+TE populations using Student’s t-test.

https://doi.org/10.1371/journal.ppat.1008144.g001

As detailed in ref.[9], the mixed AT/RC model offers several practical advantages that facilitate the elucidation of molecular mechanisms in control of differential CD8+TM recall capacities. 1., young and old IIo CD8+TE responses develop in the same host and are therefore subject to the same general perturbations provoked by various experimental interventions. 2., although the present analyses are for practical purposes focused on young and old DbNP396+CD8+TM, their differential recall potential is a trait shared with all other LCMV-specific CD8+TM populations. 3., the recall responses elaborated by transferred CD8+TM populations are primarily shaped by their intrinsic properties and, importantly, are largely independent of host age. 4., the AT of low CD8+TM numbers permits their maximal in vivo activation in the absence of artifacts that may arise from competition (i.e., the mixed AT/RC approach faithfully recapitulates the extent of differential IIo expansion observed in experiments with separate recipients of young and old CD8+TM). 5., similarly, the transfer of small CD8+TM trace populations does not prevent the generation of concurrent Io CD8+TE responses; accordingly, the system can monitor the relatively independent evolution of three CD8+TE populations targeting the same viral epitope (Io, young IIo and old IIo CD8+TE [Fig 1A]; in fact, the contemporaneous investigation of Io CD8+TE immunity can serve as an “internal control” since the effects of most treatment modalities employed here have a published precedent in naïve LCMV-challenged mice). 6., importantly, the relative extent of proliferative expansion of IIo CD8+TE (but not their functional or phenotypic profiles) can serve as a correlate for immune protection. 7., the use of two different re-challenge protocols can differentiate between basic determinants required for CD8+TM recall responses in the wake of an “acute” LCMV Arm infection (AT/RC Arm) and a more complex constellation of mechanisms supporting the effective coordination IIo CD8+TE expansions after a “chronic” LCMV clone 13 infection (AT/RC cl13) (Fig 1A).

Altogether, we deployed the mixed AT/RC approach to ascertain the contribution of particular molecular pathways to the divergent IIo expansion of young and old CD8+TM by treatment of recipients with blocking antibodies or use of immunodeficient hosts (Fig 1A). While the systemic nature of these interventions cannot discern between direct and indirect effects exerted on CD8+T cell populations, the broad utility and practical relevance of our approach lies in the relative ease with which CD8+TE cell responses can be reliably manipulated; furthermore, in the case of antibody administration, our study design also emulates clinically relevant settings for the modulation of CD8+T cell responses. Lastly, for facilitated manipulation of CD8+TM we additionally employed the “p14 chimera” model in which purified congenic p14 TN (T cell receptor transgenic [TCRtg] CD8+T cells specific for LCMV glycoprotein epitope GP33–41) are transferred into B6 recipients that are subsequently challenged with LCMV Arm to generate young and old p14 TM [9] (since p14 TM are a clonotypic population, the use of donor p14 TM also effectively controls for TCR affinity/avidity as a potentially confounding variable).

No role for IL-7 and IL-15 in the differential regulation of young and old IIo CD8+TE expansions

The cytokines IL-7 and IL-15 are essential for the preservation of CD8+T cell memory [14] and moreover may contribute to improved recall responses by acting as “adjuvants” to boost CD8+TE immunity [15, 16]. Accordingly, the increasing expression of IL-7 and IL-15 receptor components (CD127/IL-7Ra and CD122/IL-2Rb) by aging CD8+TM as well as their corresponding cytokine responsiveness (refs.[9, 10] and S1 Fig) may provide a foundation for their enhanced IIo reactivity. To test this notion, we first employed our mixed AT/RC system (Fig 1A) to quantify the impact of combined IL-7/IL-7Ra blockade on the proliferative expansion of young and old IIo CD8+TE. As shown in Fig 1B, both overall and differential IIo CD8+TE expansions after an “acute” LCMV Arm challenge were impervious to IL-7/IL-7Ra blockade; the data also illustrate that an analysis of different tissues (blood or spleen) and the use of different denominators (IIo CD8+TE per 106 cells or total spleen cells) yields essentially similar results (Fig 1B). Likewise, IL-7/IL-7Ra blockade remained without consequences in additional mixed AT/RC experiments using the “chronic” LCMV cl13 model (Fig 1C). Our results further exclude a relevant contribution of thymic stromal lymphopoietin (TSLP) to IIo CD8+TE expansions since the TSLP receptor associates with CD127 for effective signal transduction [17], and the CD127-specific antibody used in our experiments also inhibits TSLP action [18].

We further ascertained a potential role for IL-15 in our model system by conducting mixed AT/RC experiments with IL-15-/- recipients. Lack of IL-15, however, did not compromise the greater IIo reactivity of old CD8+TM (Fig 1D); in fact, IIo expansions of aged CD8+TM were somewhat increased in IL-15-/- as compared to B6 control mice (2.4-fold, p = 0.01; Fig 1D). Induction of a potent recall response in the absence of IL-15, despite impaired cell cycle entry of IIo CD8+TE [19], is consistent with the notably robust IIo CD8+TE expansions generated by LCMV-immune IL-15-/- mice [20] but the precise reason for the improved response of old CD8+TM, perhaps facilitated by greater responsiveness to other inflammatory cues, remains unclear. Nevertheless, we can conclude that neither IL-15 nor IL-7, regardless of elevated CD122 and CD127 expression by aging CD8+TM, contribute to their enhanced reactivity in the particular context of an LCMV-specific recall response.

Divergent requirements of IL-4, IL-6 and TGF for enhanced IIo reactivity of aged CD8+TM

Similar to CD127 and CD122, expression of multiple other cytokine receptors by aging CD8+TM gradually increases over time with overall gains varying from the modest (CD126/IL-6Ra, CD130/IL-6ST, IL-21R, IFNAR1) to the more pronounced (CD124/IL-4Ra, TGFβRII, CD119/IFNγR1) (S1 Fig and ref.[9]). Corresponding temporal analyses extended here to blood-borne CD8+TM populations with different LCMV specificities further support the conclusion that the prolonged phenotypic CD8+TM maturation is indeed a generalized and systemic phenomenon (Fig 2A/2B & S2 Fig). The kinetics of CD124, CD126 and TGFβRII expression are of particular interest since the respective signaling pathways emerged as distinctive traits in our earlier Ingenuity Pathway Analyses of aging CD8+TM [9], and both IL-6 and TGFβ have been suggested to exert crucial roles in the natural history of chronic LCMV infection [21, 22]. To further assess the relation between cytokine receptor expression levels and signal transduction capacity, we briefly exposed young and old p14 TM in vitro to IL-4 or IL-6 and quantified phosphorylation of STAT6 and STAT3, respectively. Here, aged p14 TM indeed responded with greater STAT phosphorylation, and the re-expression of CD124 by old p14 TM at levels otherwise found only on CD8+TN correlated with equal IL-4 reactivity of these populations (Fig 2B). The generally lower CD126 (and CD130 [9]) expression by CD8+TM, which required overall higher cytokine concentrations for effective STAT phosphorylation as compared to the IL-4 experiments, nevertheless conferred an age-dependent differential induction of pSTAT3; at the same time, IL-10-induced STAT3 phosphorylation demonstrated no differences (Fig 2B) in agreement with the stable low-level IL-10 receptor expression by aging CD8+TM [9].

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Fig 2. Divergent requirements of IL-4, IL-6 and TGFβ for enhanced IIo reactivity of aged CD8+TM.

A., cytokine receptor expression levels by blood-borne DbNP396+ and DbGP33+CD8+TM (left plot) were quantified in contemporaneous analyses of aging LCMV-immune mice by determining their respective GMFI values (geometric mean of fluorescent intensity); the overlaid histograms depict representative CD124 and CD126 expression by young (gray) and aged (black tracing) DbNP396+ (middle) and DbGP33+ (right) CD8+TM. B., left plots: temporal regulation of CD124, CD126 and TGFβRII expression by aging DbNP396+CD8+TM (triangle symbol: CD44loCD8+TN; the gray bar demarcates the period from peak Io CD8+TE expansion [d8] to initial establishment of CD8+T cell memory [d42], and asterisks indicate statistical significance comparing young and older DbNP396+CD8+TM using one-way ANOVA with Dunnett’s multiple comparisons test). Right plots: STAT phosphorylation by young (gray) and old (black) p14 TM was assessed directly ex vivo and after 15min in vitro culture in the presence of graded dosages of recombinant IL-4 (top), IL-6 (middle) or IL-10 (bottom); the top panel also includes an analysis of p14 TN (white). C., IIo CD8+TE expansions in B6, B6.IL-4-/- and B6.IL-6-/- mice after mixed AT/RC Arm. D., similar experiments as in panel C but performed with LCMV cl13. E., IIo CD8+TE expansions under conditions of TGFβ blockade. The gray and black arrows/values in panel D indicate the extent of significantly reduced (asterisks) IIo CD8+TE expansions comparing young IIo CD8+TE in B6 and B6.IL-4-/- mice (gray), as well as old IIo CD8+TE in B6 and B6.IL4-/- mice (black) (n≥3 mice/group; AT of 2x103 [panel C & E top], 10x103 [panel D top/middle] or 5x103 [panel D bottom & E bottom] young and old DbNP396+CD8+TM each).

https://doi.org/10.1371/journal.ppat.1008144.g002

Despite the heightened reactivity of old CD8+TM to IL-4, initial experiments performed with the mixed AT/RC Arm approach and B6 vs. IL-4-/- recipients did not reveal a role for IL-4 in the regulation of IIo CD8+TE expansions (Fig 2C). In contrast, LCMV cl13 infection of IL-4-/- recipients resulted in an overall decrease of specific CD8+TE immunity, including a 4.0-fold reduction of the splenic Io CD8+TE response (p = 0.0056). At the same time, the relative reduction of old IIo CD8+TE expansions was more pronounced (3.4-fold, comparing B6 and IL-4-/- recipients), albeit only modestly so, than that of respective young IIo CD8+TE populations (2.6-fold) (Fig 2D, note arrows, values [3.4x vs. 2.6x], and significance [asterisks]). Our findings thus add to an emerging consensus about the importance of IL-4 for the generation of effective antiviral CD8+T cell immunity [23, 24] by demonstrating a requirement for IL-4 to support greater recall responses in general, and the IIo reactivity of aged CD8+TM in particular; the direct correlation between CD124 expression levels of CD8+TM and their recall potential as well as the similar reduction of Io and old IIo CD8+TE expansions in IL-4-/- mice are further consistent with predictions of the “rebound model” that a progressive alignment of CD8+TN and aging CD8+TM properties may translate into a reliance on similar co-stimulatory requirements [9].

IL-6 is among the most prominent cytokines induced after an LCMV infection [25] but despite the enhanced responsiveness of aged CD8+TM to IL-6 stimulation (Fig 2B), the differential IIo responses of transferred young and old CD8+TM were not compromised by an LCMV Arm challenge of IL-6-/- recipients (Fig 2C). Using the LCMV cl13 infection protocol, IL-6-deficiency imparted a very modest 1.5-fold reduction of aged but not young IIo CD8+TE expansions that also mirrored a 1.4-fold decrease of the Io response; neither finding, however, proved significant (Fig 2D) suggesting an overall more limited contribution of IL-6 to differential young and old CD8+TM recall immunity. As to the potential function of TGFβ and related cytokines in the context of CD8+TM aging, we earlier noted a series of marked transcriptional adaptations in the TGFβ superfamily pathway and identified a pronounced increase of TGFβRII protein expression by aging CD8+TM ([9] and Fig 2B & S2 Fig). These adaptations could conceivably attenuate exuberant IIo CD8+TE responses since T cell-intrinsic TGFβ signaling was proposed to constrain LCMV-specific CD8+T cell immunity under conditions of persistent viral infection [21]. More recent work, however, could not demonstrate a therapeutic effect of TGFβ blockade in chronic LCMV infection [26, 27], and in agreement with those studies we did not observe a further enhancement of old IIo CD8+TE immunity in our mixed AT/RC system following TGFβ blockade, nor could we discern any significant impact on CD8+TM recall responses at large in either acute or chronic infection models (Fig 2E).

Contributions of IFNγ, IFNγ receptor and FasL to the differential regulation of CD8+TM recall responses

Aging of CD8+TM, in addition to multiple phenotypic alterations, also introduces a number of functional changes that collectively foster a more diversified spectrum of effector activities [9]. Notably, old CD8+TM produce more IFNγ on a per cell basis, and a greater fraction of aged CD8+TM can be induced to express Fas ligand (FasL) [9]. Together with IL-2, the production capacity of which modestly increases with age [9, 28], IFNγ and FasL also share the distinction as the only CD8+TM effector molecules whose cognate receptors (CD122, CD119, CD95/Fas) are concurrently upregulated by aging CD8+TM (S1 Fig and refs.[9, 10]). This can have direct implications for the autocrine regulation of CD8+TM immunity in the context of recall responses as documented for IL-2 [29], and similar considerations may also apply to IFNγ given that its direct action on CD8+T cells is required for optimal Io CD8+TE expansions and CD8+TM development [30]. If CD8+TM-intrinsic FasL:Fas interactions also shape IIo CD8+TE immunity, however, remains elusive.

To correlate the differential CD119 expression by young and old CD8+TM, confirmed and extended here to different LCMV-specific CD8+TM populations in peripheral blood (Fig 3A & S2 Fig), with a direct responsiveness to IFNγ we determined the extent of STAT1 phosphorylation in young and old p14 TM. Interestingly, aged p14 TM featured a slight yet significant elevation of constitutive STAT1 phosphorylation, a difference that was further amplified by in vitro exposure to IFNγ Fig 3A). Thus, taking into account differential CD119 expression levels, responsiveness to IFNγ, and IFNγ production capacities of young and old CD8+TM [9], we conducted a first set of mixed AT/RC experiments with IFNγ-/-. In this system, IFNγ production is restricted to the transferred CD8+TM populations but both host cells and donor CD8+TM can readily respond to IFNγ. Comparing CD8+TM recall responses in LCMV Arm-infected B6 vs. IFNγ-/- recipients, we found that absence of host IFNγ compromised the IIo expansions of both young and old CD8+TM, though unexpectedly the relative decrease was more pronounced for the former rather than the latter population (Fig 3B). We therefore extended our experiments to assess the contribution of IFNγ at large by use of a neutralizing antibody. Here, complete IFNγ blockade further reduced IIo CD8+TE responses and in particular impaired the IIo response of aged CD8+TE (Fig 3B; compare the increase of relative reductions among young IIo CD8+TE expansions [blood: from 2.6x in IFNγ-/- hosts to 2.9x after IFNγ blockade; a 1.1x increase] to those of aged IIo CD8+TE populations [blood: from 1.5x in IFNγ-/- hosts to 2.4x after IFNγ blockade; a 1.6x increase]). Together, our findings demonstrate a moderate role for IFNγ in the regulation of CD8+TM recall responses to an acute LCMV challenge that differs according to the cellular source of IFNγ: while the IIo expansion of young CD8+TM, despite reduced CD119 expression and signaling, is more reliant on IFNγ production by other cells, aged CD8+TM populations, on account of enhanced IFNγ production capacity [9], can better promote their own IIo reactivity. This notion is further reinforced by mixed AT/RC experiments using LCMV cl13 infection under conditions of IFNγ blockade. As shown in Fig 3C, neutralization of IFNγ profoundly depressed IIo CD8+TE immunity and largely extinguished any differences between young and old IIo CD8+TE expansions (note the comparable population sizes in blood [top] and at the level of total IIo CD8+TE per spleen [bottom] in Fig 3C).

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Fig 3. Role of IFNγ, IFNγ receptor and FasL in the regulation of young and old CD8+TM recall activity.

A., left: expression of CD119 by aging DbNP396+CD8+TM in the PBMC compartment. Right: STAT1 phosphorylation by young and aged p14 TM was determined ex vivo and after 15min in vitro exposure to recombinant IFNγ; note the slightly enhanced ex vivo pSTAT1 levels in old vs. young p14 TM. B., mixed AT/RC Arm experiments were performed with B6 and B6.IFNγ-/- recipients as well as under conditions of control (rat IgG) or αIFNγ treatment. C., similar IFNγ blocking experiments as in panel B but conducted with the chronic LCMV cl13 model. D., IIo CD8+TE expansions after AT/RC Arm (top) or AT/RC cl13 (bottom) using B6 vs. B6.lpr recipients. Arrows/values in panel B-D indicate the respective extent and significance (asterisks) by which antibody treatment or immunodeficiency reduced IIo expansions of young (gray) or old (black) IIo CD8+TE populations (n≥3 mice/group or time point; AT of 3x103 [panel B], 10x103 [panel C], 2x103 [panel D top] or 5x103 [panel D bottom] young and old DbNP396+CD8+TM each).

https://doi.org/10.1371/journal.ppat.1008144.g003

In contrast to IFNγ, the role of FasL:Fas interactions in the LCMV model appears more limited—both FasL- and Fas-mutant mice (FasLgld and Faslpr strains, respectively) control an acute LCMV infection [31]—yet a non-redundant role for Fas in virus clearance or CD8+TM generation could be readily demonstrated in mice with compound immunodeficiencies [3234]. To evaluate the contribution of the FasL:Fas pathway in our model system, we conducted mixed AT/RC experiments with B6 vs. Faslpr (“B6.lpr”) recipients and observed a preferential reduction of aged IIo CD8+TE expansions in the B6.lpr hosts that was especially pronounced following chronic LCMV cl13 infection (Fig 3D). Although we can conclude that the enhanced IIo reactivity of old CD8+TM is in part controlled by their broader FasL induction, the precise mechanisms operative in this context remain to be elucidated and may involve accelerated virus clearance [9] through FasL-dependent cytolysis, nonapoptotic FasL:Fas interactions between CD8+TM and TN that facilitate concurrent Io CD8+TE differentiation [35], or perhaps the autocrine binding of secreted FasL that, akin to a mechanism proposed for tumor cells [36], may shield IIo CD8+TE from FasL-mediated fratricide.

LFA-1 and CXCR3 blockade preferentially curtail IIo expansions of aged CD8+TM

Among the array of phenotypic changes accrued during CD8+TM aging we previously noted and interrogated several cell surface receptors involved in the regulation of CD8+T cell trafficking [9, 10]. Now, using an unbiased approach based on time series gene set enrichment analyses (GSEA) of aging p14 TM populations [10], the potential importance of differential “homing receptor” expression was further supported by our identification of the “cell adhesion molecules” module as the top Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway negatively enriched in old p14 TM (normalized enrichment score: -1.82; p = 0.0078; Fig 4A). For 29/38 genes within this module, we also performed temporal protein expression analyses and demonstrated a significant up- or downregulation by aging CD8+TM for half of these gene products (15/29; Fig 4A and ref.[9]). Here, the expression pattern of CD11a/integrin αL caught our attention for several reasons: elevated CD11a expression, similar to CD44, has long been used as a surrogate marker for “antigen-experienced” CD8+T cells [37]. In combination with CD18/integrin β2, CD11a forms the heterodimeric LFA-1 complex that constitutes, together with its ligands CD54/ICAM1 and CD102/ICAM2, one of the major pathways for leukocyte adhesion. In contrast to CD44, however, CD11a mRNA and protein expression by aging CD8+TM are subject to a slight yet significant decline (Fig 4A/4B, S2 Fig and ref.[9]). In fact, other components of the LFA-1 pathway exhibited very similar patterns with a progressive decrease of CD8+TM-expressed CD18, CD102 and in particular CD54 mRNA and/or protein (Fig 4A/4B, S2 Fig and ref.[9]).

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Fig 4. CD11a and CXCR3 blockade preferentially restrict IIo expansions of aged antiviral CD8+TM.

A., time series GSEA were conducted for ex vivo purified aging p14 TM (d46, d156, d286 and d400) as detailed in refs.[9, 10]. Top: old p14 TM are depleted for genes within the KEGG CAMs pathway module (NES: -1.82; p = 0.0078). Bottom: heat map displaying relative expression of individual genes by aging p14 TM (blue: low, red: high). The right hand column summarizes corresponding protein expression by aging splenic or blood-borne DbNP396+ and/or DbGP33+CD8+TM retrieved from LCMV-immune B6 mice; colors indicate significant expression changes accrued over time (red: upregulation; black: no change; green: downregulation) and the primary protein expression data in this summary is detailed in panel B as well as Fig 5A, S2 Fig and/or refs.[9, 10]. B., temporal regulation of CD11a and CD54 expression by DbNP396+ CD8+TE/M (triangle symbol: CD44lo CD8+TN). C., mixed AT/RC Arm and cl13 experiments were performed with rat IgG (control) or αCD11a blocking antibodies; due to the efficacy and prolonged half-life of the KBA antibody, antibodies were only injected on d0 and d2. D., temporal regulation of CXCR3 expression by aging blood-borne DbNP396+CD8+TM (dot plots gated on CD8+T cells). E., IIo CD8+TE expansions in different tissues as assessed after LCMV Arm infection and control (hamster Ig) vs. αCXCR3 treatment. Note the preferential decrease of aged IIo CD8+TE expansions in the wake of CD11a or CXCR3 blockade as indicated by black and gray arrows/values (panel C & E) (n≥3 mice/group or time point; AT of 5x103 [panel C top & E] or 8x103 [panel C middle/bottom] young and old DbNP396+CD8+TM each).

https://doi.org/10.1371/journal.ppat.1008144.g004

LFA-1 biology has been characterized in great detail [38, 39] but the precise role of CD11a in the regulation of pathogen-specific T cell immunity remains incompletely defined. In one of the most detailed report to date, Bose et al. found that CD11a-deficiency reduces Io but paradoxically enhances IIo bacterium-specific CD8+TE expansions [40]. The latter finding, however surprising, is consistent with the “rebound model” of CD8+TM de-differentiation [9, 10] in that any deficits conveyed by CD11a-deficiency are eclipsed by an advanced maturation stage of CD11a-/- CD8+TM [40] that is associated with greater recall capacity. In the LCMV system, LFA-1 blockade similarly resulted in a ~2-fold reduction of Io CD8+TE expansions ([41]) (also recapitulated in our model) but its potential impact in the specific context of CD8+TM recall responses has not yet been determined. As based on the experience with LFA-1 blockade in transplantation and autoimmunity [42, 43], and considering in particular the lower CD11a and CD54 expression of CD8+TN [9], we speculated that CD8+TM would be overall more resistant to LFA-1 blockade but that declining CD11a and CD54 levels by aging CD8+TM (Fig 4A/4B & S2 Fig) might render them again somewhat more susceptible to this intervention. Using our mixed AT/RC system, LFA-1 blockade in the context of an LCMV cl13 infection indeed promoted a prominent and preferential reduction of aged as compared to young IIo CD8+TE responses in peripheral blood (4.0-fold vs. 2.7-fold) that was less evident in the spleen or after LCMV Arm challenge (Fig 4C and not shown). In fact, blocking LFA-1 in the chronic infection model compromised old CD8+TM recall responses to an extent that approached the decrease observed for concurrent Io CD8+TE responses (4.1-fold [p = 0.0003] and 2.0-fold [p = 0.04] reduction in blood and spleen, respectively). The efficacy of LFA-1 blockade therefore correlates inversely with expression levels of CD11a (and other components of the LFA-1 pathway) on CD8+T cells such that the inhibition of proliferative expansion is greater for CD8+TN than CD8+TM, and more substantial for old than young CD8+TM. We conclude that aged CD8+TM populations rely in part on the LFA-1 system to support their improved recall responses in the periphery.

Like the integrins, and often in conjunction, chemokine receptors sensitize T cells to essential spatiotemporal cues that effectively orchestrate developing T cell responses [44]. For example, a consensus about the importance of T cell-expressed CXCR3 for effective CD8+TE priming and memory development has been established by multiple independent studies [4549] yet in regard to its relevance for the regulation of IIo responses, strikingly different conclusions were reached: CXCR3-deficiency either improved [46], did not affect [47], or compromised IIo CD8+TE reactivity [49]. The use of different model systems and experimental protocols may have contributed to the divergent outcomes but another factor may be the precise timing of re-challenge experiments since CXCR3 expression by splenic and blood-borne virus-specific CD8+TM changes substantially over a period of ~18 months ([9, 50] and Fig 4D & S2 Fig). To provide a first orientation about the principal recall potential of CXCR3hi vs. CXCR3lo CD8+TM subsets, we sorted these populations from young LCMV-immune donors and monitored the respective development of IIo CD8+TE/M populations in the AT/RC Arm model. Throughout the course of the IIo response, the progeny of CXCR3hi CD8+TM proved superior at the level of IIo CD8+TE/M abundance and accelerated phenotypic maturation (S3A–S3D Fig) but an important caveat pertains to the fact that the CXCR3hi/o CD8+TM donor subsets presented with numerous phenotypically distinctive properties beyond their CXCR3 expression status (S3D Fig). Therefore, to circumvent confounding factors associated with differential subset composition or the generation of CXCR3-/- CD8+TM [47], we used a non-depleting CXCR3 antibody [51, 52] in the context of our AT/RC studies, and our results demonstrate that CXCR3 is indeed required for optimal IIo CD8+TE reactivity. Specifically, CXCR3 blockade preferentially weakened the IIo response of old as compared to young CD8+TM, did so in a systemic fashion (i.e. was observed in blood, spleen and lymph nodes [LNs]), and to an extent that somewhat exceed the impairment of contemporaneous Io CD8+TE expansions (2.2-fold [p = 0.0005] and 3.5-fold [p = 0.0035] decrease in blood and spleen, respectively) (Fig 4E). Ready access for CD8+TM to local regions of CXCR3 ligand (CXCL9/10) expression [4649] therefore constitutes an important parameter for the optimal systemic expansion of IIo CD8+TE populations, and aged CD8+TM, by virtue of enhanced CXCR3 expression, are poised to more effectively harness these interactions.

CD28- but not CD27-dependent co-stimulation preferentially promotes enhanced IIo reactivity of aged CD8+TM

Recall responses are traditionally regarded as “co-stimulation independent” but more recent work has documented an important role especially for CD28 in the regulation of pathogen-specific IIo CD8+TE immunity [53]. Although our original analysis of genes differentially expressed by young and old CD8+TM included few members of the major co-stimulatory B7 and TNF superfamilies [9], the temporal GSEAs conducted here captured many more subtle alterations, including an upregulation of Cd28 by aging p14 TM (Fig 4A). A corresponding age-associated augmentation of CD28 protein expression was confirmed and extended here to blood-borne DbNP396+ and DbGP33+CD8+TM populations, and similar experiments corroborated a particularly prominent increase for CD27 (Fig 5A & S2 Fig), a co-stimulatory receptor that exhibits some of the most pronounced expression differences between young and old CD8+TM [9].

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Fig 5. CD28:CD80/86 but not CD27:CD70 or CD40L:CD40 co-stimulatory interactions preferentially promote improved IIo reactivity of aged antiviral CD8+TM.

A., temporal regulation of CD27 and CD28 expression by aging DbNP396+CD8+TM in peripheral blood (triangle symbol: CD44loCD8+TN). B., mixed AT/RC experiments were conducted in the LCMV Arm and cl13 systems as indicated using treatment with rat IgG (control) or CD70 blocking antibodies. C., IIo CD8+TE expansions after mixed AT/RC Arm performed under conditions of CD40L or CD28 blockade. D., same experiment as in C but depicting total splenic IIo CD8+TE numbers accumulated in the absence vs. presence of CD28 blockade. E., mixed AT/RC experiments with CD80/86-/- recipients employing LCMV Arm (top) or cl13 (middle/bottom) infection protocols. The gray and black arrows/values in panels B-D emphasize the extent of reduced IIo CD8+TE expansions comparing young IIo CD8+TE populations of control and antibody treated mice (gray), and old IIo CD8+TE populations of control and antibody treated mice (black); adjacent asterisks indicate statistical significance (n≥3 mice/group or time point; AT of 2x103 [panel B top, C, D & E top], 8x103 [panel B middle/bottom & F] or 10x103 [panel E middle/bottom] young and old DbNP396+CD8+TM each).

https://doi.org/10.1371/journal.ppat.1008144.g005

Despite the general importance of the CD27:CD70 co-stimulatory pathway [54], its contribution to the regulation of LCMV-specific CD8+TE immunity appears to be more limited. CD70 blockade or deficiency modestly reduced LCMV-specific Io CD8+TE expansions after an acute virus challenge but left the IIo response largely intact [5557]. We made near identical observations in our mixed AT/RC Arm model conducted under conditions of CD70-blockade, i.e. we found a small reduction of Io host CD8+TE responses whereas the overall and differential expansions of young and old IIo CD8+TE populations were fully preserved (Fig 5B). Blocking CD70 in the context of a chronic or high-dose LCMV infection, however, was reported to promote the opposite effect of modestly increasing Io but decreasing IIo CD8+TE responses [56, 58]. Again, these results were essentially reproduced in our experiments where LCMV cl13-induced Io CD8+TE host responses under conditions of CD70 blockade were somewhat elevated (~1.6-fold) yet concomitant young and old IIo CD8+TE expansions were both slightly reduced (Fig 5B). Regardless of the relatively small impact exerted by CD70-blockade on the coordination of CD8+TE cell immunity, the divergent regulation of Io and IIo CD8+TE responses in the same microenvironment indicates that CD27:CD70-mediated interactions are not only contingent on pathogen virulence, tropism, persistence and related parameters [54, 55] but also on the differentiation stage of specific CD8+T cells themselves. At the same time, the large increase of CD27 expression by aging CD8+TM remained unexpectedly inconsequential for the regulation of their IIo reactivity.

With regard to the gradual increase of CD28 expression by aging CD8+TM (Figs 4A, 5A & S2 Fig), earlier work by us and others has already implicated the CD28:CD80/86 pathway in the regulation of LCMV-specific IIo CD8+TE immunity [59, 60] raising the possibility that a more efficient use of these interactions by old CD8+TM may boost their recall responses. In confirmation of this prediction, the impairment of IIo CD8+TE expansions after CD28-blockade in the mixed AT/RC Arm scenario was more pronounced for old as compared to young CD8+TM (13-fold vs. 5-fold) and resulted in the obliteration of any numerical differences between young and old IIo CD8+TE populations (Fig 5C/5D). An accompanying ~3.5-fold decrease of Io NP396-specific host populations essentially replicated the phenotype of LCMV-challenged CD28-/- mice [61] and the apparently lesser impact of CD28-blockade on Io CD8+TE responses may be due to the lower CD28 expression by CD44loCD8+TN (Fig 5A). Using an alternative approach to probe the CD28:CD80/86 pathway, we conducted mixed AT/RC experiments with CD80/86-/- recipients. Based on our previous work, we anticipated a critical difference employing LCMV Arm vs. cl13 re-challenge protocols: despite the reliance of CD8+TM recall responses on CD28, re-challenge with LCMV Arm proved independent of CD80/86 suggesting the existence of another CD28 ligand; in contrast, IIo CD8+TE expansions were clearly CD80/86-dependent following an LCMV cl13 re-challenge [60]. In agreement with these findings, neither IIo nor concurrent Io CD8+TE responses elicited in the mixed AT/RC Arm system were affected by CD80/86-deficiency (Fig 5E). Yet a LCMV cl13 infection not only reduced overall CD8+TM recall reactivity but preferentially comprised the accumulation of aged (6.4-fold) as compared to young (3.6-fold) IIo CD8+TE (Fig 5E). Together, these results support the notion that CD28-mediated co-stimulation contributes to the regulation of CD8+TM recall responses in general and to the improved IIo reactivity of aged CD8+TM in particular.

Role of CD40L and CD4+T cells in the differential regulation of young and old IIo CD8+TE responses

In extension of our investigation into major co-stimulatory pathways above, we also evaluated the potential involvement of CD40L:CD40 interactions in the regulation of IIo CD8+TE immunity, experiments prompted by our observation that aged CD8+TM synthesize larger amounts of CD40L upon re-stimulation [9]. Although CD8+T cell-produced CD40L appears dispensable for Io CD8+TE responses [62], it readily promotes DC activation, B cell proliferation and antibody production [63], and may boost IIo CD8+TE immunity under conditions of limited inflammation [64]. Similarly, our previous work has documented that CD40L blockade administered within the first week of acute LCMV Arm infection does not impinge on Io CD8+TE responses but affects subsequent CD8+TM development as revealed by impaired IIo in vitro cytotoxic T lymphocyte (CTL) activity [65]. While these results point towards a more limited and context-dependent role for CD8+T cell-produced CD40L, any interpretation of outcomes observed after anti-CD40L treatment has to consider that it targets both CD4+ and CD8+T cell subsets.

In the mixed AT/RC Arm setting employed here, acute CD40L blockade did not compromise Io or IIo CD8+TE responses (Fig 5C), observations that are also consistent with the finding that neither Io nor IIo p14 TE responses benefitted from the provision of additional CD4+T cell help [66]. Yet the situation was reportedly different in the chronic LCMV model: supplementary CD4+T cell help increased IIo but not Io p14 TE responses, and the effect was abolished by CD40L blockade indicating that CD8+TM are more reliant than CD8+TN on CD40L-mediated CD4+T cell help [66]. In the experiments shown in Fig 5F, we further quantified CD8+TE expansions after mixed AT/RC cl13 under conditions of CD40L blockade. Similar to West et al. [66], we found no obvious impact on Io CD8+TE responses but readily observed a significant reduction of young IIo CD8+TE populations; nearly identical results were obtained when the experiments were performed with CD4+T cell-depleted recipients (Fig 5F). Although these results fail to identify a specific contribution for CD8+TM-expressed CD40L to the regulation of recall responses, they confirm the notion of CD40L:CD40 interactions as an accessory pathway for the optimal elaboration of IIo but not Io CD8+TE responses. Perhaps most interesting is the fact that aged IIo CD8+TE reactivity, just like Io CD8+TE responses, remained largely unperturbed by either CD40L-blockade or absence of CD4+T cell help in the AT/RC cl13 model (Fig 5F). This outcome is in fact predicted by the “rebound model” of CD8+TM maturation which proposes a progressive harmonization of aging CD8+TM properties with those of CD8+TN [9, 10], and thus over time a waning importance for CD4+T cell help. The model can also explain the seemingly contrasting conclusion that LM-specific CD8+TM recall responses become more CD4+T cell-dependent with age [67]: as opposed to the CD4+T cell-independent LCMV Arm system, Marzo et al. employed an LM infection protocol where CD4+T cell depletion greatly reduced Io CD8+TE responses [67]. The complementary observation that CD4+T cell depletion in the context of an LM re-challenge also curtailed IIo CD8+TE expansions, and that this effect became more pronounced with advancing age [67] further indicates that aging CD8+TM gradually re-establish a reliance on CD4+T cell help akin to that exhibited by CD8+TN.

Enforced SAP expression constrains IIo CD8+TE expansions

The expression patterns of CD2/SLAM family genes and proteins provide yet another example for the converging temporal regulation of CD8+TM properties within a defined molecular family: mRNA and/or protein expression of CD2 and signaling lymphocytic activation molecule family (SLAMF) members 1/2/4-7 are all progressively downmodulated in aging CD8+TM [9]. The functional relevance of these phenotypic changes, however, is difficult to predict due to the complexities, redundancies and context-dependent activities of integrated SLAMF receptor signaling [68]. Even so, since all T cell-expressed SLAMF receptors operate through the same small adaptor SAP (SLAM-associated protein) [68], a slight decline of Sh2d1a message in aging CD8+TM was noteworthy [9] in light of earlier work with SAP-/- mice that demonstrated enhanced Io virus-specific CD8+TE activity [68], presumably due to an impairment of activation-induced cell death (AICD) [69]. In our experiments, however, expression of SAP protein by aging CD8+TM did not decline [9], and eight days after mixed AT/RC Arm, the activation-induced increase of SAP was comparable between young and old IIo CD8+TE (not shown).

Nevertheless, we chose to explore the additional possibility of differential SAP induction specifically in the earliest phase of the IIo response. To this end, we employed the p14 chimera model and compared the initial recall response of young and aged p14 TM by CFSE dilution in vivo and in vitro. Although we observed similar proliferation patterns for all IIo p14 TE populations (Fig 6A), more detailed analyses of the in vitro studies suggested that aged p14 TM might start to divide a little earlier (i.e., exhibiting a ~1.4-fold higher division indices) yet the identical proliferation indices of young and old IIo p14 TE (Fig 6A) are consistent with our earlier conclusion about the comparable antigen-driven proliferation of peripheral young and old IIo CD8+TE [9]. Importantly though, the better survival of aged IIo CD8+TE in our in vivo model [9] corresponded to higher numbers of old IIo p14 TE surviving in the in vitro culture system (Fig 6A) supporting the general utility of the latter experimental approach. We then proceeded with the quantification of SAP expression as a function of in vitro proliferation and found that the early IIo effector phase of young but not old p14 TM was accompanied by a significant elevation of SAP levels (Fig 6A). Thus, the increased in vitro accumulation of aged IIo p14 TE correlates with their lower SAP expression which is consistent with the notion of impaired AICD in the absence of SAP [69].

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Fig 6. Enforced SAP expression constrains IIo reactivity of CD8+TM.

A., proliferation of young and old IIo p14 TE as determined by CFSE dilution in vivo (64h after AT/RC Arm with 106 p14 TM) and in vitro (PBMC containing equal numbers of p14 TM cultured for 72h with GP33–41 peptide-coated APCs). The adjacent diagrams depict in vitro proliferation indices, absolute numbers of p14 T cells at start (d0) and end (d3) of culture, and SAP expression as a function of cell division. B., flow chart for construction of retrogenic p14 chimeras including 1.5h in vitro spinfection with pMiG-empty (control) or pMiG-SAP (experimental) retroviruses. C., total SAP content of Io p14 TE (d8) comparing control and experimental p14 chimeras as well as transduced (GFP+) and untransduced (GFP-) subsets. D., experimental flow chart: GFP+ p14 TM (d89) were FACS-purified from control and experimental p14 chimeras and transferred into B6 mice (2x103/recipient) that were then challenged with LCMV Arm and analyzed 6–8 days later. E., IIo p14 TE expansions in peripheral blood (d6); dot plots gated on all PBMC, note that GFP expression is restricted to the transferred congenic CD90.1+p14 T cells. F., summary of IIo p14 TE expansions in blood (d6) and spleen (d8); n≥3 mice/group.

https://doi.org/10.1371/journal.ppat.1008144.g006

To formally evaluate the hypothesis that the amount of induced SAP expression determines the recall reactivity of IIo CD8+TE populations, we generated retroviral p14 chimeras that overexpress SAP selectively in subpopulations of p14 TE/M as detailed in Fig 6B/6C and Methods. Following purification of p14 TM transduced with SAP or control retroviruses, AT into naïve B6 hosts and re-challenge with LCMV Arm or cl13 (Fig 6D), enforced SAP expression indeed compromised IIo p14 TE expansions (Fig 6E/6F and not shown). Collectively, our experiments therefore indicate that the improved antigen-driven IIo expansion of aged CD8+TM is facilitated by their restrained upregulation of SAP expression. In the chronic LCMV model, the SLAMF4/CD244 receptor was recently assigned a predominantly inhibitory function as based on enhanced NK cell activity in CD244-/- mice as well as greater IIo reactivity of CD244-/- p14 TM in the AT/RC cl13 system [66, 70], and most recent work specifies that inhibitory functions exerted by the entire Slam locus on NK cell responses are solely based on CD244 activity [71]. It should therefore be interesting to assess if the early recall response of CD244-/- CD8+TM also involves a subdued induction of SAP.

Discussion

In contrast to the wealth of information detailing the roles of multiple TCR-independent determinants in shaping Io pathogen-specific CD8+TE responses, considerably less information is available about the regulation of IIo CD8+TE immunity [72, 73]. Moreover, the notion of long-term CD8+T cell memory as a progressively evolving trait has gained increasing traction over the past half decade and implies the potential remodeling of relevant recall response determinants; to date, however, their identities and possible contributions to altered IIo CD8+TE reactivity remain largely unknown. To begin to address these issues, we took advantage of a recent screen that correlates a surprising abundance of distinctive molecular, phenotypic and functional properties of aged CD8+TM populations with their enhanced recall capacity [9], and interrogated the specific contribution of 15 molecular pathways to the regulation of IIo CD8+TE expansions. Our results are noteworthy for the identification of 1., diverse molecular interactions that embellish IIo CD8+TE responses in general and those of old CD8+TM in particular; 2., an age-dependent convergence between an acquisition of naïve-like CD8+TM properties [9] and an enhanced reliance on recall response determinants critical for the effective priming of naïve CD8+T cells; 3., the distinct outcomes observed after acute vs. chronic viral re-challenge; and 4., the receptors/ligands that, against expectation, did not participate in control of IIo CD8+TE reactivity (Table 1). Collectively, our observations reveal a previously unappreciated temporal contingency of recall responses that endows aged CD8+TM with the capacity to more effectively harness a multiplicity of disparate molecular interactions in the wake of a re-infection. Accordingly, our emphasis of mechanistic diversity over detail in the present study may also serve as an outline and orientation for future in-depth investigations into specific molecular pathways that are of relevance to the regulation of IIo CD8+TE immunity.

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Table 1. Recall response determinants for aging CD8+TM populations: Summary of experimental interventions and outcomes.

https://doi.org/10.1371/journal.ppat.1008144.t001

Here, we focused our attention on selected pathways comprising cytokine signaling, T cell trafficking, co-stimulation and -inhibition, and effector functionalities that might constitute pertinent recall response determinants for old CD8+TM on account of the long-term expression kinetics previously reported for the respective CD8+TM-expressed receptors/ligands (the relative robustness of these temporal expression patterns is now supported by an extension of our earlier analyses to aging antiviral CD8+TM populations in the blood, and to subsets with different epitope specificities and TCR affinities/avidities [9]). For consistency and comparative purposes, we employed a mixed AT/RC setting where the IIo expansions of the dominant DbNP396+ CD8+TE population peak on d8 after re-challenge [9]; other epitope-specific CD8+TE populations may display slightly different recall kinetics, but we emphasize that expansion differences captured at different time points during the IIo CD8+TE stage largely carry over into the IIo CD8+TM phase and thus reflect not only a differential recall but also a distinct IIo memory potential of CD8+TM subsets with disparate phenotypic/functional properties (ref.[9] and S3B–S3D Fig). While our choice of IIo CD8+TE expansions as a principal analytical modality is based on its direct correlation with immune protection [9], we note that the precise virus clearance kinetics in our model system are contingent on multiple variables (maturation stage and number of separately transferred CD8+TM, nature of the IIo challenge, type of experimental pathway blockade) such that differential virus control may only be observed in certain “combinatorial scenarios” as shown previously [66]. In contrast, the quantification of divergent IIo CD8+TE expansions, especially those derived from two distinct CD8+TM populations within the same host, is a more robust measure that is, within limits, impervious to the number of transferred CD8+TM [9]. Accordingly, a detailed interrogation of IIo CD8+TE kinetics, associated virus suppression and IIo CD8+TM development is beyond the scope of the present work and will be reserved for our future investigations into selected mechanisms operative in the regulation of CD8+TM recall responses.

With these caveats in mind, our findings collectively indicate that IL-4-, LFA-1-, CXCR3- and CD28-dependent interactions, restrained induction of SAP expression, as well as CD8+TM-produced FasL and IFNγ not only promote overall enhanced IIo CD8+TE expansions, but in particular convey a set of heterogeneous signals that collectively boost the recall reactivity of aged CD8+TM populations (Table 1). While the relative contribution of individual molecular pathways to the regulation of recall responses ranges from the modest to the more pronounced (e.g., a 2.8-fold reduction of LCMV Arm-driven aged IIo CD8+TE expansions under conditions of IFNγ neutralization vs. an up to 13-fold inhibition in the context of CD28 blockade), the overall efficacy of IIo CD8+TE immunity and immune protection [9] is shaped by the integrated activity of different pathways the individual or combined therapeutic targeting of which may in fact allow for the tailored modulation of specific CD8+TM responses. As a proof-of-principle for the latter contention, we show in additional experiments that combined CD28 and CXCR3 blockade exerts a synergistic effect by compromising young and especially old CD8+TM recall responses to an extent that substantially exceeds the effects of individual pathway blockade (S4 Fig).

Furthermore, the above molecular interactions mostly are of greater importance for the regulation of IIo CD8+TE immunity in response to chronic rather than acute viral challenges. Recent work supports the notion that the eventual or at least partial control of chronic viral infections relies on a multiplicity of specific determinants that are often dispensable for the clearance of acute virus infections [74]. Our observations extend this concept to the context of IIo CD8+TE responses by documenting that CD8+TM, far from being “co-stimulation independent”, also require the productive engagement of diverse molecular pathways to unfold their full recall potential when confronted with a chronic virus challenge. A further elucidation of these phenomena might very well help to establish an adjusted perspective onto one of the central tenets of T cell memory, namely its presumed imperviousness to the modulation by biochemical pathways commonly referred to as “signal 2 & signal 3” [75]. In fact, the “rebound model” [9], together with the present report, suggests that aging CD8+TM become increasingly reliant on the very same “signal 2 & signal 3” interactions that, dependent on the experimental system, also control Io CD8+TE differentiation.

Two pathways interrogated in the present study were found to be of preferential importance to the regulation of young rather than old IIo CD8+TE responses (Table 1). Here, the greater dependence of young CD8+TM recall responses on CD4+T cell help and CD40L-mediated interactions in the chronic LCMV system is essentially consistent with the “rebound model”, but the enhanced reliance of young CD8+TM on non-CD8+TM-produced IFNγ, despite reduced CD119/IFNγR1 expression and sensitivity, was unexpected. IFNγ can exert both stimulatory and inhibitory effects on CD8+TE populations [30, 76], and the specific balance achieved between these opposing signals may be distinct for young and old CD8+TM, perhaps as a result of differential IFNγR2 induction [77], but ultimately the reasons for the greater role of host IFNγ in control of young IIo CD8+TE immunity remain unclear. We also found that several other cytokine signaling and co-stimulatory pathways (IL-6, IL-7, IL-15, TSLP, TGFβ, CD27:CD70) appeared to have at best a minor impact on the regulation of IIo CD8+TE responses (Table 1). While these results underscore the obvious fact that promising clues gleaned from a comprehensive set of databases [9] need not necessarily translate into biologically relevant differences within a given model system, they neither rule out potential redundancies not investigated in the present study nor the possibility that these as well as additional pathways may be operative in the context of other experimental and naturally occurring scenarios. Therefore, in as much as the “rebound model” of extended CD8+TM maturation applies to pathogen infections in general, the progressive “de-differentiation” of aging CD8+TM, especially given the “programmed” nature of this process [9], may allow them to brace for more effective recall responses under a greater variety of productive pathogen re-encounters. At the same time, the multitude of diverse molecular pathways involved in shaping improved clinical outcomes also provides an abundance of different targets for potential therapeutic interventions.

Materials and methods

Ethics statement

All procedures involving laboratory animals were conducted in accordance with recommendations issued in the “Guide for the Care and Use of Laboratory Animals of the National Institutes of Health”, the protocols were approved by the Institutional Animal Care and Use Committees (IACUC) of the University of Colorado (70205604[05]1F, 70205607[05]4F and B-70210[05]1E) and Icahn School of Medicine at Mount Sinai (IACUC-2014-0170), and all efforts were made to minimize suffering of animals.

Mice, virus and challenge protocols

C57BL6/J (B6), congenic B6.CD90.1 (B6.PL-Thy1a/CyJ) and B6.CD45.1 (B6.SJL-Ptprca Pepcb/BoyJ), IL-4-/- (B6.129P2-Il4tm1Cgn/J), IL-6-/- (B6.129S2-Il6tm1Kopf/J), IFNγ-/- (B6.129S7-Ifngtm1Ts/J), CD80/86-/- (B6.129S4-Cd80tm1ShrCd86tm2Shr/J) and lpr (B6.MRL-Faslpr/J) mice on the B6 background were purchased from The Jackson Laboratory; B6.IL-15-/- (C57BL/6NTac-IL15tm1Imx N5) mice were acquired from Taconic; and p14 mice harboring TCRtg CD8+T cells specific for the dominant Db-restricted LCMV-GP33–41 determinant were obtained on a B6.CD90.1 background from Dr. M. Oldstone. We only used male mice in this study to avoid potential artifacts that may arise in gender mismatched AT settings. LCMV Armstrong (clone 53b) and clone 13 (cl13) were obtained from Dr. M. Oldstone, and grown and titered as described [78]. For Io challenges, 8–10 week old mice were infected with a single intraperitoneal (i.p.) dose of 2x105 plaque-forming units (pfu) LCMV Arm, housed under SPF conditions and monitored for up to ~2 years; for IIo challenges, naïve congenic recipients of various CD8+TM populations were inoculated with 2x105 pfu LCMV Arm i.p. or 2x106 pfu LCMV cl13 i.v. As discussed elsewhere [9, 10], exclusion criteria for aging LCMV-immune mice in this study included gross physical abnormalities (lesions, emaciation and/or pronounced weight loss), lymphatic tumors as indicated by enlarged LNs at time of necropsy, and T cell clonal expansions among virus-specific CD8+TM populations (DbNP396+, DbGP33+ or DbGP276+); according to these criteria, up to ~30% of aging mice were excluded from the study.

Tissue processing, cell purification and adoptive transfers (AT)

Lymphocytes were obtained from blood, spleen and LNs according to standard procedures [79]. Enrichment of splenic T cells was performed with magnetic beads using variations and adaptations of established protocols [9] and reagents purchased from StemCell Technologies, Miltenyi Biotec and Invitrogen/Caltag/Thermofisher (S1 Table). For mixed AT/RC experiments, CD8+TM from young and aged LCMV-immune B6 and B6-congenic donors were enriched by combined depletion of B and CD4+T cells (or only B cells) followed by 1:1 combination at the level of DbNP396+CD8+TM, i.v. AT of mixed populations containing 2–10x103 young and old DbNP396+CD8+TM each into naïve congenic recipients, and challenge with LCMV (Figs 1A–1D, 2C–2E, 3B–3D, 4C/4E & 5B–5F). For construction of p14 chimeras [9], CD8+T cells were enriched from spleens of naïve CD90.1+ p14 mice by negative selection, and 5x104 purified p14 cells were transferred i.v. into B6 recipients prior to LCMV infection 2–24h later. We note that p14 TM differentiation in this model system is contingent on p14 TN input numbers [80, 81] an increase of which will in fact accelerate p14 TM maturation kinetics at large [9]. While chimera generation with 5x104 p14 TN may therefore underestimate differences between young and aged p14 TM, our use of this model is restricted here to an effective demonstration of their differential cytokine responsiveness (Figs 2B & 3A), new analyses of previously generated data sets [9] (Fig 4A & S1 Fig), and the revelation of distinctive functional properties during the earliest stages of the young vs. old p14 TM recall response (Fig 6A). In the latter experiments, 106 young or old CFSE-labeled p14 TM were transferred into B6 recipients that were then challenged with LCMV Arm, and in vivo proliferation of IIo p14TE was analyzed 64h later as detailed in ref.[9] (Fig 6A).

Stimulation cultures

Splenic single cell suspensions prepared from young and old LCMV-immune p14 chimeras were cultured for 15min in complete RPMI with graded dosages of recombinant cytokines (murine IL-4, IL-6, IL-10, IFNγ; Peprotech) prior to fixation with PFA buffer, processing and combined CD90.1 and intracellular pSTAT staining (Figs 2B & 3A). For in vitro proliferation and survival assays, lympholyte-purified PBMC from young and old LCMV-immune p14 chimeras were labeled with CFSE, adjusted to contain the same number of p14 TM, and cultured for 72h with T cell-depleted, LCMV-GP33–41 peptide-coated B6 spleen cells; numbers of surviving p14 T cells were subsequently calculated using Countess (Invitrogen) or Vi-Cell (Beckmann Coulter) automated cell counters (Fig 6A).

Flow cytometry

All reagents and materials used for analytical flow cytometry are summarized in S1 Table, and our basic staining protocols are described and/or referenced in ref.[9]. Detection of phosphorylated signal transducer and activator of transcription (STAT) proteins (Figs 2B & 3A) was performed using methanol-based cell permeabilization as described [82]. All samples were acquired on FACSCalibur, LSR II (BDBiosciences), Cyan (Beckman Coulter) or Attune NxT (Thermofisher) flow cytometers and analyzed with DIVA (BDBiosciences) and/or FlowJo (TreeStar) software; and visualization of in vivo and in vitro T cell proliferation by step-wise dilution of CFSE as well as calculation of proliferation and division indices was performed using the FlowJo “proliferation platform” (Fig 6A). To isolate CD8+TM subsets with differential CXCR3 expression levels (S3A Fig), live (Zombie Violet-) CXCR3hi and CXCR3lo populations were sorted on a FACSAria (BDBiosciences) from spleen cells obtained from LCMV-immune B6.CD90.1 mice and pre-enriched by magnetic bead depletion of CD4+T and CD19+B cells (Miltenyi).

Microarray analyses

Details for microarray analyses of highly purified p14 TE/M populations and time series GSEAs (Fig 4A & S1 Fig) are found in refs.[9, 10]; all data can be retrieved from the GEO repository (accession number GSE38462; https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE38462).

In vivo antibody treatment

For in vivo blockade of cytokine signaling, T cell trafficking or co-stimulation (Figs 1B/1C, 2E, 3B/3C, 4C/4E & 5B–5D/5F), naïve B6 or B6 congenic recipients were injected i.p. with antibodies ~2h before AT of mixed CD8+TM populations and subsequent LCMV infection as well as on d2 and d4 after challenge (αIL-7 [M25] & αIL-7Ra [A7R34]: 3x500μg each; αTGFβ1,2,3 [1D11.16.8]: 3x1000μg; αIFNγ [XMG1.2]: 3x1000μg; αCXCR3 [CXCR3–173]: 3x100μg; αCD70: [FR70]: 3x250μg; αCD154/CD40L [MR1]: 3x250μg; αCD28 [37.51]: 3x100μg; αCD62L [MEL-14]: 3x150μg); αCD11a/LFA-1 [KBA]: 2x200μg on d0 and d2 only; corresponding control antibodies: dosages commensurate to experimental antibodies; for combination treatment [S4 Fig], the same schedule was employed using 3x200μg hamster IgG, 3x100μg αCD28, 3x100μg αCXCR3, or 3x100μg αCD28 and αCXCR3 each); in vivo CD4+T cell depletion was achieved by i.p. injection of 200μg GK1.5 antibody on days -1 and +1 in relation to AT/RC [83]. Further details about all in vivo antibodies are provided in S1 Table.

Retroviral transductions, chimera construction and transduced p14 TM purification

Murine Sh2d1a (SAP) cDNA was purchased from Open Biosystems (clone ID 1400188) and sub-cloned into a murine stem cell virus- (MSCV-) based retroviral pMiG vector that contains green fluorescent protein (GFP) as a reporter (gift from Dr. P. Marrack). To generate retroviruses, pMiG-empty or pMiG-SAP plasmids were co-transfected with PsiEco helper plasmid into Phoenix 293T cells using Fugene 6 (Roche) according to standard procedures [82]. After 48h, retroviral supernatants were harvested and spin-transductions of in vivo activated p14 splenocytes (naïve p14 mice infected with 2x106 pfu LCMV Arm i.v. 24h earlier) were performed for 90min at 32°C in the presence of 8μg/mL polybrene, 10mM HEPES and 10μg/mL recombinant hIL-2. Transduced p14 splenocytes were transferred “blind” into naïve B6 mice that were subsequently infected with 2x105 pfu LCMV Arm i.p. (Fig 6B), and effective transduction levels were verified in blood-borne p14 TE 8 days later (Fig 6C). For subsequent AT/RC experiments, transduced p14 TM (CD4-B220-CD90.1+GFP+) were purified from spleens using a Coulter Moflo XDP cell sorter.

Statistical analyses

Data handling, analysis and graphic representation was performed using Prism 6.0c (GraphPad Software). All data summarized in bar and line diagrams are expressed as mean ±1 standard error (SEM), and asterisks indicate statistical differences calculated by Student’s t-test or one-way ANOVA with Dunnett’s multiple comparisons test, and adopt the following convention: *: p<0.05, **: p<0.01 and ***: p<0.001.

Supporting information

S1 Fig. Gene set enrichment analysis (GSEA) of aging p14 TM: The JAK-STAT signaling pathway.

Time series GSEA were conducted with data sets obtained for aging p14 TM (d46, d156, d286 and d400) purified from LCMV-challenged p14 chimeras and processed directly ex vivo for microarray hybridization as detailed in refs.[9, 10]. Top: aged p14 TM are enriched for genes within the KEGG JAK-STAT signaling pathway module (normalized enrichment score: 1.05). Bottom: heat map displaying relative expression of individual genes by aging p14 TM (blue: low, red: high). The right hand column summarizes corresponding protein expression patterns conducted with aging DbNP396+ and/or DbGP33+ CD8+TM retrieved from spleen or blood of LCMV-immune B6 mice; colors identify significant expression changes accrued over time (red: upregulation; black: no change; green: downregulation); where indicated in parenthesis, CD8+TM were stimulated in vitro prior to analysis (IFNγ: 5h TCR stimulation with peptide; phosphorylated STAT proteins: 15min stimulation with indicated cytokines). The primary protein expression data in this summary are shown in Figs 2A/2B, 3A, S2 Fig and/or refs.[9, 10].

https://doi.org/10.1371/journal.ppat.1008144.s001

(TIF)

S2 Fig. Temporal regulation of selected CD8+TM-expressed cell surface receptors/ligands.

PBMC obtained from cohorts of aging LCMV-immune mice were contemporaneously stained to quantify expression levels of indicated receptors/ligands by DbGP33+ CD8+TM (GMFI: gometric mean of fluoresecence intensity; n≥3 mice per time point; statistical differences between young and older CD8+TM were calculated using one-way ANOVA with Dunnett’s multiple comparisons test).

https://doi.org/10.1371/journal.ppat.1008144.s002

(TIF)

S3 Fig. Differential recall and IIo memory potential of young CXCR3hi vs. CXCR3lo CD8+TM subsets.

CXCR3hi and CXCR3lo CD8+T cell subsets were purified from young LCMV-immune B6.CD90.1 donors (d46) by combined magnetic bead and fluorescence activated cell sorting, and transferred i.v. into separate B6 recipients that were subsequently challenged with LCMV Arm (CXCR3hi transfers contained 5.0x103 DbNP396+ and 1.2x103 DbGP33+ CD8+TM per recipient, CXCR3lo transfers contained 5.0x103 DbNP396+ and 1.35x103 DbGP33+ CD8+TM per recipient). A., identification of DbNP396+ and DbGP33+ CD8+TM (left) and representative CXCR3 (and CX3CR1) expression pattern by DbNP396+ and DbGP33+ CD8+TM (right; the indicated regions demarcate CXCR3hi and CXCR3lo subsets corresponding to our sorting strategy). Values in dot plots are the percentage of cells within the indicated regions. B., kinetics of IIo DbNP396+ (left) and DbGP33+ (right) CD8+TE expansions as well as IIo CD8+TM development in peripheral blood (black: IIo CD8+TE/M derived from CXCR3hi donor CD8+TM, gray: IIo CD8+TE/M derived from CXCR3lo donor CD8+TM). C., specific IIo CD8+TM abundance in spleen (d30 after AT/RC); n = 5 mice per group and time point in panels B and C. D., histograms are gated on Io (donor, d46) or IIo (d46 + d30) DbNP396+ CD8+TM as indicated; the respective tracings correspond to the phenotypes of either CXCR3lo (gray filled) or CXCR3hi (black) Io donor CD8+TM subsets, or to those of IIo CD8+TM derived from CXCR3lo (gray) vs. CXCR3hi (black) Io CD8+TM (concatenated files of three mice/group; values featured in black or gray are the percentage of respective Io or IIo CD8+TM expressing high levels of indicated cell surface antigens). Note that CXCR3hi-derived IIo CD8+TM display a more mature phenotype as indicated by partial re-expression of high CXCR3, CD27 and CD127 levels as well as downregulation of CD43 (115kd glycoform), CX3CR1 and in particular KLRG1 (no differences were noted for CD62L and CD122 expression).

https://doi.org/10.1371/journal.ppat.1008144.s003

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S4 Fig. Synergy of combined CD28 and CXCR3 blockade.

Mixed AT/RC Arm experiments were conducted under conditions of separate or combined CD28/CXCR3 blockade, and the bar diagram enumerates IIo DbGP33+ CD8+TE in the spleen with arrows, values and associated asterisks (significance) indicating the factors by which indicated treatment modalities reduced respective old and young recall responses in comparison to hamster IgG-treated control mice. While the overall reduction of IIo CD8+TE expansions after individual pathway blockade was somewhat less (αCD28 treatment) or more (αCXCR3 treatment) pronounced than in our other experiments (also evident at the level of impaired Io CD8+TE responses), combined CD28/CXCR3 blockade decreased old CD8+TM recall responses to a significantly greater extent than CD28 or CXCR3 blockade alone (p = 0.0204 and p = 0.0015, respectively); a similar synergism was also observed for the inhibition of young CD8+TM recall responses (αCD28/CXCR3 vs. αCD28 treatment p = 0.0022). These differences began to emerge in peripheral blood as early as d5 after AT/RC where only combination treatment resulted in a significant attenuation of aged (p<0.04) and to a lesser extent also young (p<0.04) IIo CD8+TE expansions (n = 3 mice/group and time point; AT of ~5x103 young and old DbGP33+CD8+TM each).

https://doi.org/10.1371/journal.ppat.1008144.s004

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S1 Table. Reagents and materials.

Details about all antibodies, staining dyes, magnetic beads, MHC-I monomers/tetramers, and recombinant cytokines used in the present study.

https://doi.org/10.1371/journal.ppat.1008144.s005

(PDF)

Acknowledgments

We wish to thank Drs. R. Gill, P. Marrack and A. Veillette for the generous gift of several unique antibodies (S1 Table), Drs. Z. Yi and W. Zhang for conducting the GSEAs, Dr. E. Clambey for assistance with the collection of blood and tissue samples, and the NIH Tetramer Core Facility for provision of biotinylated MHC:peptide monomers.

References

  1. 1. Sallusto F, Geginat J, Lanzavecchia A. Central memory and effector memory T cell subsets: function, generation, and maintenance. Annu Rev Immunol. 2004;22:745–63. pmid:15032595
  2. 2. Harty JT, Badovinac VP. Shaping and reshaping CD8+ T-cell memory. Nat Rev Immunol. 2008;8(2):107–19. pmid:18219309
  3. 3. Mueller SN, Gebhardt T, Carbone FR, Heath WR. Memory T cell subsets, migration patterns, and tissue residence. Annu Rev Immunol. 2013;31:137–61. pmid:23215646
  4. 4. Crotty S, Kaech SM, Schoenberger SP. Immunologic memory. In: Paul WE, editor. Fundamental Immunology. 7th ed. ed. Philadelphia, PA: Lippincott Williams & Wilkins; 2013. p. 741–64.
  5. 5. Roberts AD, Ely KH, Woodland DL. Differential contributions of central and effector memory T cells to recall responses. J Exp Med. 2005;202(1):123–33. pmid:15983064
  6. 6. Klinger A, Gebert A, Bieber K, Kalies K, Ager A, Bell EB, et al. Cyclical expression of L-selectin (CD62L) by recirculating T cells. Int Immunol. 2009;21(4):443–55. pmid:19240088
  7. 7. Rutishauser RL, Kaech SM. Generating diversity: transcriptional regulation of effector and memory CD8 T-cell differentiation. Immunol Rev. 2010;235(1):219–33. pmid:20536566
  8. 8. Martin MD, Kim MT, Shan Q, Sompallae R, Xue HH, Harty JT, et al. Phenotypic and Functional Alterations in Circulating Memory CD8 T Cells with Time after Primary Infection. PLoS Pathog. 2015;11(10):e1005219. pmid:26485703
  9. 9. Eberlein J, Davenport B, Nguyen TT, Victorino F, Karimpour-Fard A, Hunter LE, et al. Aging promotes acquisition of naïve-like CD8+ memory T cell traits and enhanced functionalities. J Clin Invest. 2016;106(10):3942–60.
  10. 10. Davenport B, Eberlein J, van der Heide V, Jhun K, Nguyen TT, Victorino F, et al. Aging of Antiviral CD8(+) Memory T Cells Fosters Increased Survival, Metabolic Adaptations, and Lymphoid Tissue Homing. J Immunol. 2019;202(2):460–75. pmid:30552164
  11. 11. Graef P, Buchholz VR, Stemberger C, Flossdorf M, Henkel L, Schiemann M, et al. Serial transfer of single-cell-derived immunocompetence reveals stemness of CD8(+) central memory T cells. Immunity. 2014;41(1):116–26. pmid:25035956
  12. 12. Stemberger C, Graef P, Odendahl M, Albrecht J, Dossinger G, Anderl F, et al. Lowest numbers of primary CD8(+) T cells can reconstitute protective immunity upon adoptive immunotherapy. Blood. 2014;124(4):628–37. pmid:24855206
  13. 13. Nolz JC, Harty JT. Protective capacity of memory CD8+ T cells is dictated by antigen exposure history and nature of the infection. Immunity. 2011;34(5):781–93. pmid:21549619
  14. 14. Boyman O, Krieg C, Homann D, Sprent J. Homeostatic maintenance of T cells and natural killer cells. Cell Mol Life Sci. 2012;69(10):1597–608. pmid:22460580
  15. 15. Mackall CL, Fry TJ, Gress RE. Harnessing the biology of IL-7 for therapeutic application. Nat Rev Immunol. 2011;11(5):330–42. pmid:21508983
  16. 16. Kim MT, Harty JT. Impact of Inflammatory Cytokines on Effector and Memory CD8+ T Cells. Frontiers in immunology. 2014;5:295. pmid:24995011
  17. 17. Pandey A, Ozaki K, Baumann H, Levin SD, Puel A, Farr AG, et al. Cloning of a receptor subunit required for signaling by thymic stromal lymphopoietin. Nat Immunol. 2000;1(1):59–64. pmid:10881176
  18. 18. Brown VI, Hulitt J, Fish J, Sheen C, Bruno M, Xu Q, et al. Thymic stromal-derived lymphopoietin induces proliferation of pre-B leukemia and antagonizes mTOR inhibitors, suggesting a role for interleukin-7Ralpha signaling. Cancer Res. 2007;67(20):9963–70. pmid:17942929
  19. 19. Richer MJ, Pewe LL, Hancox LS, Hartwig SM, Varga SM, Harty JT. Inflammatory IL-15 is required for optimal memory T cell responses. J Clin Invest. 2015;125(9):3477–90. pmid:26241055
  20. 20. Becker TC, Wherry EJ, Boone D, Murali-Krishna K, Antia R, Ma A, et al. Interleukin 15 is required for proliferative renewal of virus-specific memory CD8 T cells. J Exp Med. 2002;195(12):1541–8. pmid:12070282
  21. 21. Tinoco R, Alcalde V, Yang Y, Sauer K, Zuniga EI. Cell-intrinsic transforming growth factor-beta signaling mediates virus-specific CD8+ T cell deletion and viral persistence in vivo. Immunity. 2009;31(1):145–57. pmid:19604493
  22. 22. Harker JA, Lewis GM, Mack L, Zuniga EI. Late interleukin-6 escalates T follicular helper cell responses and controls a chronic viral infection. Science. 2011;334(6057):825–9. pmid:21960530
  23. 23. Lee A, Park SP, Park CH, Kang BH, Park SH, Ha SJ, et al. IL-4 Induced Innate CD8+ T Cells Control Persistent Viral Infection. PLoS Pathog. 2015;11(10):e1005193. pmid:26452143
  24. 24. White JT, Cross EW, Kedl RM. Antigen-inexperienced memory CD8+ T cells: where they come from and why we need them. Nat Rev Immunol. 2017;17(6):391–400. pmid:28480897
  25. 25. Bonilla WV, Frohlich A, Senn K, Kallert S, Fernandez M, Johnson S, et al. The alarmin interleukin-33 drives protective antiviral CD8(+) T cell responses. Science. 2012;335(6071):984–9. pmid:22323740
  26. 26. Garidou L, Heydari S, Gossa S, McGavern DB. Therapeutic blockade of transforming growth factor beta fails to promote clearance of a persistent viral infection. J Virol. 2012;86(13):7060–71. pmid:22553324
  27. 27. Boettler T, Cheng Y, Ehrhardt K, von Herrath M. TGF-beta blockade does not improve control of an established persistent viral infection. Viral Immunol. 2012;25(3):232–8. pmid:22620718
  28. 28. Wherry EJ, Teichgraber V, Becker TC, Masopust D, Kaech SM, Antia R, et al. Lineage relationship and protective immunity of memory CD8 T cell subsets. Nat Immunol. 2003;4(3):225–34. pmid:12563257
  29. 29. Feau S, Arens R, Togher S, Schoenberger SP. Autocrine IL-2 is required for secondary population expansion of CD8(+) memory T cells. Nat Immunol. 2011;12(9):908–13. pmid:21804558
  30. 30. Whitmire JK, Tan JT, Whitton JL. Interferon-gamma acts directly on CD8+ T cells to increase their abundance during virus infection. J Exp Med. 2005;201(7):1053–9. pmid:15809350
  31. 31. Balkow S, Kersten A, Tran TT, Stehle T, Grosse P, Museteanu C, et al. Concerted action of the FasL/Fas and perforin/granzyme A and B pathways is mandatory for the development of early viral hepatitis but not for recovery from viral infection. J Virol. 2001;75(18):8781–91. pmid:11507223
  32. 32. Rode M, Balkow S, Sobek V, Brehm R, Martin P, Kersten A, et al. Perforin and Fas act together in the induction of apoptosis, and both are critical in the clearance of lymphocytic choriomeningitis virus infection. J Virol. 2004;78(22):12395–405. pmid:15507626
  33. 33. Weant AE, Michalek RD, Khan IU, Holbrook BC, Willingham MC, Grayson JM. Apoptosis regulators Bim and Fas function concurrently to control autoimmunity and CD8+ T cell contraction. Immunity. 2008;28(2):218–30. pmid:18275832
  34. 34. Hughes PD, Belz GT, Fortner KA, Budd RC, Strasser A, Bouillet P. Apoptosis regulators Fas and Bim cooperate in shutdown of chronic immune responses and prevention of autoimmunity. Immunity. 2008;28(2):197–205. pmid:18275830
  35. 35. Klebanoff CA, Scott CD, Leonardi AJ, Yamamoto TN, Cruz AC, Ouyang C, et al. Memory T cell-driven differentiation of naive cells impairs adoptive immunotherapy. J Clin Invest. 2016;126(1):318–34. pmid:26657860
  36. 36. Hallermalm K, De Geer A, Kiessling R, Levitsky V, Levitskaya J. Autocrine secretion of Fas ligand shields tumor cells from Fas-mediated killing by cytotoxic lymphocytes. Cancer Res. 2004;64(18):6775–82. pmid:15374996
  37. 37. Rai D, Pham NL, Harty JT, Badovinac VP. Tracking the total CD8 T cell response to infection reveals substantial discordance in magnitude and kinetics between inbred and outbred hosts. J Immunol. 2009;183(12):7672–81. pmid:19933864
  38. 38. Hogg N, Patzak I, Willenbrock F. The insider’s guide to leukocyte integrin signalling and function. Nat Rev Immunol. 2011;11(6):416–26. pmid:21597477
  39. 39. Berlin-Rufenach C, Otto F, Mathies M, Westermann J, Owen MJ, Hamann A, et al. Lymphocyte migration in lymphocyte function-associated antigen (LFA)-1-deficient mice. J Exp Med. 1999;189(9):1467–78. pmid:10224287
  40. 40. Bose TO, Pham QM, Jellison ER, Mouries J, Ballantyne CM, Lefrancois L. CD11a regulates effector CD8 T cell differentiation and central memory development in response to infection with Listeria monocytogenes. Infect Immun. 2013;81(4):1140–51. pmid:23357382
  41. 41. Gerard A, Khan O, Beemiller P, Oswald E, Hu J, Matloubian M, et al. Secondary T cell-T cell synaptic interactions drive the differentiation of protective CD8+ T cells. Nat Immunol. 2013;14(4):356–63. pmid:23475183
  42. 42. Ford ML, Adams AB, Pearson TC. Targeting co-stimulatory pathways: transplantation and autoimmunity. Nature reviews Nephrology. 2014;10(1):14–24. pmid:24100403
  43. 43. Krummey SM, Ford ML. Heterogeneity within T Cell Memory: Implications for Transplant Tolerance. Frontiers in immunology. 2012;3:36. pmid:22566919
  44. 44. Griffith JW, Sokol CL, Luster AD. Chemokines and chemokine receptors: positioning cells for host defense and immunity. Annu Rev Immunol. 2014;32:659–702. pmid:24655300
  45. 45. Guarda G, Hons M, Soriano SF, Huang AY, Polley R, Martin-Fontecha A, et al. L-selectin-negative CCR7- effector and memory CD8+ T cells enter reactive lymph nodes and kill dendritic cells. Nat Immunol. 2007;8(7):743–52. pmid:17529983
  46. 46. Hu JK, Kagari T, Clingan JM, Matloubian M. Expression of chemokine receptor CXCR3 on T cells affects the balance between effector and memory CD8 T-cell generation. Proc Natl Acad Sci U S A. 2011;108(21):E118–27. pmid:21518913
  47. 47. Kurachi M, Kurachi J, Suenaga F, Tsukui T, Abe J, Ueha S, et al. Chemokine receptor CXCR3 facilitates CD8(+) T cell differentiation into short-lived effector cells leading to memory degeneration. J Exp Med. 2011;208(8):1605–20. pmid:21788406
  48. 48. Kohlmeier JE, Reiley WW, Perona-Wright G, Freeman ML, Yager EJ, Connor LM, et al. Inflammatory chemokine receptors regulate CD8(+) T cell contraction and memory generation following infection. J Exp Med. 2011;208(8):1621–34. pmid:21788409
  49. 49. Sung JH, Zhang H, Moseman EA, Alvarez D, Iannacone M, Henrickson SE, et al. Chemokine guidance of central memory T cells is critical for antiviral recall responses in lymph nodes. Cell. 2012;150(6):1249–63. pmid:22980984
  50. 50. Hikono H, Kohlmeier JE, Takamura S, Wittmer ST, Roberts AD, Woodland DL. Activation phenotype, rather than central- or effector-memory phenotype, predicts the recall efficacy of memory CD8+ T cells. J Exp Med. 2007;204(7):1625–36. pmid:17606632
  51. 51. Uppaluri R, Sheehan KC, Wang L, Bui JD, Brotman JJ, Lu B, et al. Prolongation of cardiac and islet allograft survival by a blocking hamster anti-mouse CXCR3 monoclonal antibody. Transplantation. 2008;86(1):137–47. pmid:18622291
  52. 52. Abboud G, Desai P, Dastmalchi F, Stanfield J, Tahiliani V, Hutchinson TE, et al. Tissue-specific programming of memory CD8 T cell subsets impacts protection against lethal respiratory virus infection. J Exp Med. 2016;213(13):2897–911. pmid:27879287
  53. 53. van der Heide V, Homann D. CD28 days later: Resurrecting costimulation for CD8(+) memory T cells. Eur J Immunol. 2016;46(7):1587–91. pmid:27401871
  54. 54. Wortzman ME, Clouthier DL, McPherson AJ, Lin GH, Watts TH. The contextual role of TNFR family members in CD8(+) T-cell control of viral infections. Immunol Rev. 2013;255(1):125–48. pmid:23947352
  55. 55. Schildknecht A, Miescher I, Yagita H, van den Broek M. Priming of CD8+ T cell responses by pathogens typically depends on CD70-mediated interactions with dendritic cells. Eur J Immunol. 2007;37(3):716–28. pmid:17295392
  56. 56. Penaloza-MacMaster P, Ur Rasheed A, Iyer SS, Yagita H, Blazar BR, Ahmed R. Opposing effects of CD70 costimulation during acute and chronic lymphocytic choriomeningitis virus infection of mice. J Virol. 2011;85(13):6168–74. pmid:21507976
  57. 57. Munitic I, Kuka M, Allam A, Scoville JP, Ashwell JD. CD70 deficiency impairs effector CD8 T cell generation and viral clearance but is dispensable for the recall response to lymphocytic choriomeningitis virus. J Immunol. 2013;190(3):1169–79. pmid:23269247
  58. 58. Matter MS, Claus C, Ochsenbein AF. CD4+ T cell help improves CD8+ T cell memory by retained CD27 expression. Eur J Immunol. 2008;38(7):1847–56. pmid:18506879
  59. 59. Grujic M, Bartholdy C, Remy M, Pinschewer DD, Christensen JP, Thomsen AR. The role of CD80/CD86 in generation and maintenance of functional virus-specific CD8+ T cells in mice infected with lymphocytic choriomeningitis virus. J Immunol. 2010;185(3):1730–43. pmid:20601595
  60. 60. Eberlein J, Davenport B, Nguyen TT, Victorino F, Sparwasser T, Homann D. Multiple Layers of CD80/86-Dependent Costimulatory Activity Regulate Primary, Memory, and Secondary Lymphocytic Choriomeningitis Virus-Specific T Cell Immunity. J Virol. 2012;86(4):1955–70. pmid:22156513
  61. 61. Suresh M, Whitmire JK, Harrington LE, Larsen CP, Pearson TC, Altman JD, et al. Role of CD28-B7 interactions in generation and maintenance of CD8 T cell memory. J Immunol. 2001;167(10):5565–73. pmid:11698427
  62. 62. Durlanik S, Loyal L, Stark R, Sercan Alp O, Hartung A, Radbruch A, et al. CD40L expression by CD4+ but not CD8+ T cells regulates antiviral immune responses in acute LCMV infection in mice. Eur J Immunol. 2016;46(11):2566–73. pmid:27562840
  63. 63. Frentsch M, Stark R, Matzmohr N, Meier S, Durlanik S, Schulz AR, et al. CD40L expression permits CD8+ T cells to execute immunologic helper functions. Blood. 2013;122(3):405–12. pmid:23719298
  64. 64. Shugart JA, Bambina S, Alice AF, Montler R, Bahjat KS. A self-help program for memory CD8+ T cells: positive feedback via CD40-CD40L signaling as a critical determinant of secondary expansion. PLoS One. 2013;8(5):e64878. pmid:23717671
  65. 65. Homann D, Jahreis A, Wolfe T, Hughes A, Coon B, van Stipdonk MJ, et al. CD40L blockade prevents autoimmune diabetes by induction of bitypic NK/DC regulatory cells. Immunity. 2002;16(3):403–15. pmid:11911825
  66. 66. West EE, Youngblood B, Tan WG, Jin HT, Araki K, Alexe G, et al. Tight Regulation of Memory CD8(+) T Cells Limits Their Effectiveness during Sustained High Viral Load. Immunity. 2011;35(2):285–98. pmid:21856186
  67. 67. Marzo AL, Vezys V, Klonowski KD, Lee SJ, Muralimohan G, Moore M, et al. Fully functional memory CD8 T cells in the absence of CD4 T cells. J Immunol. 2004;173(2):969–75. pmid:15240684
  68. 68. Veillette A, Dong Z, Latour S. Consequence of the SLAM-SAP signaling pathway in innate-like and conventional lymphocytes. Immunity. 2007;27(5):698–710. pmid:18031694
  69. 69. Chen G, Tai AK, Lin M, Chang F, Terhorst C, Huber BT. Increased proliferation of CD8+ T cells in SAP-deficient mice is associated with impaired activation-induced cell death. Eur J Immunol. 2007;37(3):663–74. pmid:17266174
  70. 70. Waggoner SN, Taniguchi RT, Mathew PA, Kumar V, Welsh RM. Absence of mouse 2B4 promotes NK cell-mediated killing of activated CD8+ T cells, leading to prolonged viral persistence and altered pathogenesis. J Clin Invest. 2010;120(6):1925–38. pmid:20440077
  71. 71. Guo H, Cranert SA, Lu Y, Zhong MC, Zhang S, Chen J, et al. Deletion of Slam locus in mice reveals inhibitory role of SLAM family in NK cell responses regulated by cytokines and LFA-1. J Exp Med. 2016;213(10):2187–207. pmid:27573813
  72. 72. Duttagupta PA, Boesteanu AC, Katsikis PD. Costimulation signals for memory CD8+ T cells during viral infections. Crit Rev Immunol. 2009;29(6):469–86. pmid:20121696
  73. 73. Morris AB, Adams LE, Ford ML. Influence of T Cell Coinhibitory Molecules on CD8(+) Recall Responses. Frontiers in immunology. 2018;9:1810. pmid:30135685
  74. 74. Kahan SM, Wherry EJ, Zajac AJ. T cell exhaustion during persistent viral infections. Virology. 2015.
  75. 75. Curtsinger JM, Mescher MF. Inflammatory cytokines as a third signal for T cell activation. Curr Opin Immunol. 2010;22(3):333–40. pmid:20363604
  76. 76. Badovinac VP, Porter BB, Harty JT. CD8+ T cell contraction is controlled by early inflammation. Nat Immunol. 2004;5(8):809–17. pmid:15247915
  77. 77. Schroder K, Hertzog PJ, Ravasi T, Hume DA. Interferon-gamma: an overview of signals, mechanisms and functions. J Leukoc Biol. 2004;75(2):163–89. pmid:14525967
  78. 78. Homann D, Tishon A, Berger DP, Weigle WO, von Herrath MG, Oldstone MB. Evidence for an underlying CD4 helper and CD8 T-cell defect in B-cell-deficient mice: failure to clear persistent virus infection after adoptive immunotherapy with virus-specific memory cells from muMT/muMT mice. J Virol. 1998;72(11):9208–16. pmid:9765468
  79. 79. Lenz DC, Kurz SK, Lemmens E, Schoenberger SP, Sprent J, Oldstone MB, et al. IL-7 regulates basal homeostatic proliferation of antiviral CD4+T cell memory. Proc Natl Acad Sci U S A. 2004;101(25):9357–62. pmid:15197277
  80. 80. Marzo AL, Klonowski KD, Le Bon A, Borrow P, Tough DF, Lefrancois L. Initial T cell frequency dictates memory CD8+ T cell lineage commitment. Nat Immunol. 2005;6(8):793–9. pmid:16025119
  81. 81. Badovinac VP, Haring JS, Harty JT. Initial T cell receptor transgenic cell precursor frequency dictates critical aspects of the CD8(+) T cell response to infection. Immunity. 2007;26(6):827–41. pmid:17555991
  82. 82. Eberlein J, Nguyen TT, Victorino F, Golden-Mason L, Rosen HR, Homann D. Comprehensive assessment of chemokine expression profiles by flow cytometry. J Clin Invest. 2010;120(3):907–23. pmid:20197626
  83. 83. Hildemann SK, Eberlein J, Davenport B, Nguyen TT, Victorino F, Homann D. High efficiency of antiviral CD4(+) killer T cells. PLoS One. 2013;8(4):e60420. pmid:23565245