UID NAME input_a input_b input_c 7day_a 7day_b 14day_a 14day_b 21day_a 21day_b 28day_a 28day_b 28day_c 28day_d 28day_e SCUT2742 STM0016 || STM0016 || putative protein || 366683 0.05 -0.15 0.09 -0.69 -0.94 -0.83 -0.95 -0.96 -0.94 -1.27 -0.58 -1.31 -1.23 -0.54 SCUT2659 "STM0030 || STM0030 || putative transcriptional regulator, LysR family || 366124" 0.1 -0.15 0.06 -0.73 -0.28 -1 -0.86 -0.89 -1.25 -0.8 -0.75 -0.88 -0.78 -0.82 SCUT7388 STM0035 || STM0035 || putative arylsulfatase || 364053 -0.01 -0.17 0.19 -0.9 -0.33 -0.98 -0.77 -1.36 -1.1 -1.04 -1.23 -0.87 -0.36 -0.65 SCUT7393 STM0046 || ileS || isoleucine tRNA synthetase || 369247 -0.01 0.01 -0.16 -0.6 -0.59 -0.72 -0.55 -0.67 -0.65 -0.01 SCUT7421 STM0100 || STM0100 || putative cytoplasmic protein || 368409 -0.14 0.17 -0.04 -0.74 -0.58 -0.72 -0.65 -0.76 -0.65 -1.22 -0.69 -0.7 -0.44 -0.6 SCUT9217 STM0115 || leuO || putative transcriptional regulator (LysR family) || 364500 0.04 -0.15 0.12 -0.69 -0.74 -0.28 -0.11 -0.51 -0.5 -0.87 -0.49 -1.06 -0.6 -0.48 SCUT7452 STM0163 || STM0163 || pyridoxine phosphate biosynthetic protein || 367008 -0.03 -0.06 0.08 -0.3 -0.14 -0.5 -0.37 -0.42 -0.42 -0.39 -0.49 -0.17 -0.33 SCUT9006 "STM0191 || fhuA || outer membrane protein receptor / transporter for ferrichrome, colicin M, and phages T1, T5, and phi80 || 365845" 0.22 -0.11 -0.11 -0.63 -0.38 -0.89 -0.42 -0.88 -0.55 -0.72 -0.81 -0.54 -0.12 0.04 SCUT3119 STM0237 || rof || modulator of Rho-dependent transcription termination || 367851 -0.06 0.06 -1.42 -1.06 -1.17 -0.95 -0.8 -0.74 -0.67 -0.57 -0.89 SCUT9552 STM0298 || STM0298 || putative integrase core domain || 364503 0.06 0.07 -0.12 -0.8 -0.35 -1.05 -0.89 -1.49 -0.96 -1.31 -1.12 -1.3 -0.88 SCUT6763 STM0298 || STM0298 || putative integrase core domain || 368390 0.12 -0.07 -0.04 -0.8 -0.48 -0.98 -0.75 -1.11 -1.08 -1.46 -0.96 -1.06 -0.86 SCUT8901 STM0369 || prpC || putative citrate synthase || 367226 0.05 -0.11 0.07 -0.09 -0.26 -0.41 -0.44 -0.66 -0.3 -0.53 -0.36 -0.19 -0.27 -0.36 SCUT2452 STM0379 || yaiZ || putative inner membrane protein || 365906 0.2 -0.22 0.01 -0.91 -1.06 -0.89 -0.78 -0.88 -0.86 -1.14 -0.85 -0.93 -0.99 -0.98 SCUT2658 STM0433 || thiJ || 4-methyl-5(beta-hydroxyethyl)-thiazole synthesis || 366725 0.02 -0.11 0.09 -0.21 -0.48 -0.36 -0.67 -0.38 -0.13 -0.66 -0.26 -0.76 -0.57 -0.36 SCUT2802 STM0442 || cyoB || cytochrome o ubiquinol oxidase subunit I || 363834 0.04 -0.14 0.1 -0.7 -0.55 -0.73 -0.83 -1.12 -0.91 -1.01 -1.07 -1.22 -0.74 -0.97 SCUT2957 STM0518 || gip || glyoxylate -induced protein || 362917 0.22 -0.1 -0.12 -0.77 -0.7 -0.15 -0.42 0.14 0.21 -1.55 -1.19 -2.05 -2.17 -1.24 SCUT6892 STM0520 || STM0520 || putative permease || 366732 0.07 -0.09 0.03 -0.53 -0.12 -0.23 -0.25 -0.61 -0.48 -0.44 -0.28 -0.53 -0.39 -0.44 SCUT1910 STM0523 || allB || allantoinase || 362590 0.05 -0.03 -0.01 -0.68 -0.32 -0.55 -0.17 -0.42 -0.65 -0.46 -0.38 -0.88 -0.76 -0.29 SCUT9224 "STM0545 || fimC || periplasmic chaperone, required for type 1 fimbriae || 368504" 0.15 -0.14 0 -0.24 -0.52 0.01 -0.57 -0.62 -0.24 -0.93 -0.53 -0.78 -0.34 -0.48 SCUT6906 STM0552 || fimW || putative fimbrial protein || 365248 0.15 -0.07 -0.07 -0.41 -0.35 0.29 -0.06 0.16 0.23 -1.16 -0.56 -0.93 -0.92 -0.74 SCUT2099 STM0578 || nfnB || dihydropteridine reductase/oxygen-insensitive NAD(P)H nitroreductase || 368931 0.13 -0.2 0.06 -0.33 -0.38 -0.59 -0.55 -0.75 -0.51 -0.7 -0.41 -1 -0.77 -1.02 SCUT2370 STM0589 || fepE || ferric enterobactin (enterochelin) transporter || 365584 0.07 -0.07 -0.01 -0.19 -0.28 -0.34 -0.25 -0.52 -0.47 -0.34 -0.3 -0.5 -0.44 -0.23 SCUT10383 "STM0629 || cspE || RNA chaperone, negative regulator of cspA transcription || 366075" -0.04 0.04 -0.67 -0.41 -0.28 -0.86 -1.11 -0.92 -0.93 -0.44 -0.81 -0.77 SCUT6207 "STM0629 || cspE || RNA chaperone, negative regulator of cspA transcription || 367549" -0.22 0.22 -0.67 -0.65 -0.79 -1.38 -1.13 -1.27 -0.8 -0.52 -0.95 SCUT9364 "STM0756 || nadA || quinolinate synthetase, A protein || 368420" 0.11 -0.05 -0.06 -0.31 -0.23 -0.39 -0.22 -0.3 -0.7 -0.53 -1.11 -0.56 -0.74 SCUT2143 "STM0762 || STM0762 || fumarate hydratase, alpha subunit || 367520" 0.11 -0.27 0.15 -0.57 -0.72 -1.17 -1.05 -1.23 -1.18 -1.51 -0.86 -1.21 -0.94 -1.21 SCUT1669 "STM0828 || glnQ || ABC superfamily (atp_bind), glutamine high-affinity transporter || 365137" 0.19 -0.11 -0.09 -0.27 -0.45 -0.73 -0.66 -0.36 -0.56 -0.59 -0.59 -0.75 -0.46 -0.61 SCUT1730 STM0839 || STM0839 || putative inner membrane protein || 362538 0.1 -0.06 -0.03 -1.21 -1.26 -0.03 -0.25 -1.36 -1.2 -1.92 -1.39 -2.37 -2.2 -2.94 SCUT6337 STM0858 || STM0858 || putative dehydrogenase (flavoproteins) || 365275 -0.12 -0.15 0.27 -1.08 -0.83 -1.35 -1.18 -1.67 -1.65 -1.76 -1.56 -1.46 -1.16 -1.55 SCUT6338 "STM0859 || STM0859 || putative transcriptional regulator, LysR family || 364677" -0.25 0.04 0.21 -1.02 -0.81 -1.1 -1.1 -1.13 -0.98 -1.61 -1.11 -0.98 -0.77 -0.99 SCUT1831 STM0862 || yliJ || putative glutathione S-transferase || 367825 -0.01 0.05 -0.04 -0.49 -0.54 -0.46 -0.64 -0.53 -0.71 -0.74 -0.61 -0.97 -0.92 -0.84 SCUT6341 STM0866 || mdfA || multidrug translocase || 363716 -0.13 -0.03 0.15 -0.34 -0.31 -0.44 -0.6 -1.06 -0.73 -0.76 -0.47 -0.69 -0.73 SCUT6397 STM0972 || STM0972 || homologous to secreted protein sopD || 363672 0.17 -0.09 -0.08 -1.23 -0.76 -1.3 -1.51 -1.62 -2.08 -2.18 -1.31 -1.63 -1.74 -1.68 SCUT2419 "STM1003 || STM1003 || putative transcriptional regulator, Lrp family || 367668" -0.16 -0.12 0.28 -1.08 -0.96 -1.44 -1.22 -1.28 -1.6 -0.63 -0.6 -0.93 -0.59 0.2 SCUT1951 STM1005 || STM1005 || Gifsy-2 prophage; integrase || 363373 -0.16 0.16 -0.47 -0.5 -0.55 -0.36 -0.46 -0.36 -0.61 -0.32 -0.45 -0.05 -0.42 SCUT6426 STM1094 || pipD || Pathogenicity island encoded protein: SPI3 || 362213 0.13 -0.13 0 -1.22 -1.1 -1.28 -1.59 -1.73 -1.94 -1.33 -1.67 -1.71 -1.42 SCUT6427 STM1095 || copS || Copper resistance; histidine kinase || 368982 0.08 -0.23 0.15 -1.43 -1.27 -1.25 -1.46 -1.64 -1.51 -1.98 -1.28 -1.77 -1.59 SCUT2308 STM1101 || hpaG || 4-hydroxyphenylacetate catabolism || 367546 0.11 -0.04 -0.08 -0.41 -0.49 -0.44 -0.61 -0.68 -0.81 -0.69 -0.38 -0.86 -0.59 -0.78 SCUT10031 STM1117 || agp || glucose-1-phosphatase || 368100 -0.08 0.02 0.06 -0.22 -0.02 -0.28 -0.36 -0.25 -0.28 -0.38 -0.46 -0.49 -0.19 -0.42 SCUT6447 "STM1140 || csgF || curli production assembly/transport component, 2nd curli operon || 366004" -0.05 0.1 -0.04 -1.03 -0.61 -0.68 -0.82 -0.68 -1.24 -0.57 -1.37 -1.18 -1.71 SCUT6449 STM1142 || csgD || putative transcriptional regulator (LuxR/UhpA family) || 364794 -0.02 -0.14 0.16 -0.44 -0.55 -0.35 -0.5 -1.07 -0.86 -1.11 -0.84 -1 -0.65 -1.14 SCUT6450 "STM1143 || csgB || minor curlin subunit precursor, nucleator for assembly of adhesive surface organelles || 365036" 0.08 -0.06 -0.02 -0.56 -0.47 -0.45 -0.27 -0.61 -0.31 -0.41 -0.16 -0.25 -0.19 -0.48 SCUT2498 STM1192 || plsX || putative fatty acid/phospholipid synthesis protein || 363667 0 0 -0.52 -0.11 -0.5 -0.42 -0.51 -0.67 -0.64 -0.43 -0.54 SCUT2823 STM1214 || ycfR || putative outer membrane protein || 367609 0.07 0.03 -0.1 -0.52 -0.41 -0.22 -0.48 -0.6 -0.75 -0.47 -0.3 0 -0.48 SCUT2152 STM1263 || STM1263 || putative periplasmic protein || 362932 0.09 0.13 -0.21 -0.48 -0.46 -0.94 -0.57 -0.81 -1.1 -0.7 -0.49 -1.04 SCUT6521 STM1274 || yeaQ || putative inner membrane protein || 363776 0 -0.01 0.01 -0.14 -0.34 -0.2 -0.42 -0.44 -0.37 -0.42 -0.31 -0.41 -0.24 -0.31 SCUT2171 "STM1312 || celA || PTS family, sugar specific enzyme IIB for cellobiose, arbutin, and salicin || 367910" 0.09 0.01 -0.11 -1.37 -1.09 -1.14 -0.85 -0.25 -0.27 -1.21 -0.88 -1.67 -1.48 -2.17 SCUT6556 STM1343 || nlpC || lipoprotein || 367326 0.22 0.01 -0.23 -1.41 -1.22 -1.29 -0.93 -1.14 -1.12 -1.25 -0.57 -1.54 -1.09 -1.32 SCUT6560 STM1351|ydiT-STM1352|ydiS || STM1351|ydiT-STM1352|ydiS || || 365755 0.04 0 -0.05 -1.06 -1.08 -0.31 -0.4 -0.7 -0.16 -1.49 -1.27 -2.15 -2.16 -1.52 SCUT9062 STM1392 || ssrA || Secretion system regulator:Sensor component || 366655 0.39 -0.55 0.16 -1.61 -0.86 -1.94 -1.96 -2.03 -2.09 -1.95 -1.41 -2.22 -2.29 -2.57 SCUT8957 STM1393 || ssaB || Secretion system apparatus || 367181 -0.19 -0.25 0.43 -1.76 -1.14 -1.52 -1.87 -2.2 -1.81 -2.29 -1.54 SCUT9179 STM1394 || ssaC || Secretion system apparatus || 363161 -0.07 0.07 -2.38 -2.15 -2.66 -2.46 -2.59 -2.31 -2.95 -2.28 -2.65 -2.57 -3.47 SCUT6587 STM1394 || ssaC || Secretion system apparatus || 365924 0.03 -0.09 0.07 -0.99 -0.74 -1.56 -1.71 -1.36 -1.62 -1.86 -1.53 -1.62 -1.42 -1.83 SCUT10238 STM1394 || ssaC || Secretion system apparatus || 368315 0.04 -0.03 0 -1.07 -0.67 -1.52 -2.32 -1.77 -1.88 -1.47 -1.59 -1.64 -2.02 SCUT9107 STM1395 || ssaD || Secretion system apparatus || 363779 0.29 -0.06 -0.23 -0.63 -0.27 -0.44 -0.46 -0.91 -0.61 -0.71 -0.1 -0.64 -0.93 -0.96 SCUT10199 STM1395 || ssaD || Secretion system apparatus || 367571 0 -0.91 -0.85 -0.78 -1.07 -1.23 -0.82 -1.53 SCUT9126 STM1395 || ssaD || Secretion system apparatus || 368746 0.06 -0.11 0.06 -0.4 -0.32 -0.42 -0.54 -0.87 -0.62 -1.13 -0.7 -0.36 -0.69 -1.1 SCUT10374 STM1396 || ssaE || Secretion system effector || 363282 -0.03 0.07 -0.03 -0.78 -0.46 -0.87 -0.84 -1 -0.96 -1.01 -0.93 -0.82 -1.01 SCUT6590 STM1398 || sseB || Secretion system effector || 364957 0.16 -0.16 -0.61 -0.93 -0.51 -0.89 -0.68 -0.71 -1.29 -0.75 -0.94 -0.83 -0.9 SCUT6594 STM1403 || sscB || Secretion system chaparone || 362556 0.04 -0.11 0.06 -0.21 -0.46 -0.47 -0.46 -0.32 -0.65 -0.62 -0.57 -0.37 -0.21 -0.64 SCUT9133 STM1409 || ssaJ || Secretion system apparatus: homology with the yscJ/mxiJ/prgK family of lipoproteins || 365390 0.04 -0.13 0.09 -0.74 -0.42 -0.75 -0.41 -0.8 -0.67 -0.62 -0.42 -0.92 -0.21 -0.63 SCUT6599 STM1415 || ssaN || Secretion system apparatus: homology with the YscN family of proteins || 366910 0.01 -0.19 0.17 -0.42 -0.48 -0.68 -0.53 -0.74 -0.85 -0.84 -0.63 -0.87 -0.32 -0.78 SCUT6604 STM1422 || ssaU || Secretion system apparatus: homology with YscU of the secretion system of Yersinia || 363477 0.1 -0.05 -0.04 -0.54 -0.28 -0.62 -0.57 -0.84 -0.97 -0.81 -0.56 -0.65 -0.71 -0.67 SCUT6633 STM1482 || ydgF || putative membrane transporter of cations and cationic drugs || 363295 -0.02 0.04 -0.02 -0.51 -0.47 -0.81 -1.22 -1.02 -1.39 -0.99 -0.67 -0.64 -0.85 SCUT2060 STM1543 || STM1543 || putative transport protein || 367796 0.18 -0.09 -0.08 -0.51 -0.31 -0.39 -0.31 -0.36 -0.65 -0.71 -0.22 -0.48 -0.68 -0.74 SCUT7526 STM1549 || STM1549 || putative translation initiation inhibitor || 363933 -0.01 -0.35 0.37 -0.5 -0.52 -0.91 -1.46 -1.08 -0.98 -1.54 -1.25 -1.17 -1.09 -1.26 SCUT2675 STM1557 || STM1557 || putative aminotransferase || 365544 0.22 -0.06 -0.15 -0.25 -0.65 -0.36 -0.56 -0.41 -0.69 -0.55 -0.57 -0.63 -0.51 -0.76 SCUT2067 STM1571 || yddG || putative permease || 363567 0.23 -0.07 -0.17 -0.81 -0.81 -1 -0.89 -0.65 -0.91 -0.98 -0.78 -1.34 -1.03 -1 SCUT7545 STM1583 || STM1583 || putative cytoplasmic protein || 368900 0.26 0.04 -0.3 -0.87 -0.72 -1.31 -1.11 -1.39 -1.32 -1.45 -1.22 -1.47 -1.69 -1.54 SCUT2892 STM1631 || sseJ || Salmonella translocated effector: regulated by SPI-2 || 368783 -0.27 0.27 -0.58 -0.48 -1.31 -1.31 -1.43 -1.47 -1.7 -1.34 -1.25 -0.97 -1.46 SCUT2377 STM1652 || ynaF || putative universal stress protein || 368721 0.17 -0.15 -0.03 -0.61 -0.42 -0.56 -0.53 -0.67 -0.59 -0.6 -0.71 -0.75 -0.89 -0.99 SCUT9108 "STM1660 || fnr || transcriptional regulation of aerobic, anaerobic respiration, osmotic balance (CRP family) || 363176" 0.14 -0.14 -0.47 -0.41 -0.7 -0.8 -0.81 -0.73 -0.72 -0.41 -0.41 SCUT7593 STM1669 || STM1669 || homology to invasin C of Yersinia; intimin || 366319 0.01 -0.01 -0.71 -1.26 -1.04 -1.22 -0.9 -1.08 -1 -1.04 -0.84 SCUT7608 STM1706 || yciH || putative translation initiation factor SUI1 || 364236 -0.06 0.04 0.02 -0.37 -0.21 -0.72 -0.88 -0.78 -0.85 -0.95 -0.35 -0.85 -0.41 -1.02 SCUT2355 STM1818 || fadD || acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) || 365563 0.1 -0.23 0.12 -0.23 -0.67 -0.17 -0.58 -0.37 -0.41 -0.9 -0.41 -0.9 -0.52 -0.9 SCUT7673 STM1823 || yoaH || putative cytoplasmic protein || 367839 0 -0.59 -0.03 -0.24 -0.23 -0.38 -0.68 -0.29 SCUT7681 "STM1837 || cspC || cold shock protein, multicopy suppresses mukB mutants, putative regulator || 363878" -0.21 0.09 0.11 -0.47 -0.5 -0.9 -1.1 -1 -1.63 -1.1 -0.86 -0.84 -0.94 SCUT2814 STM1862 || pagO || PhoPQ-activated gene; predicted integral membrane protein || 364812 0.13 -0.07 -0.06 -0.67 -0.19 -0.69 -0.75 -1.15 -1.15 -0.98 -0.94 -0.82 -1.05 -1.09 SCUT7693 STM1868|mig-3_int_STM1868A || STM1868|mig-3_int_STM1868A || || 364855 0 -0.47 -0.77 -0.27 -0.2 -0.58 -0.51 -0.68 -0.54 -0.64 -0.21 -0.48 SCUT1733 STM1896 || STM1896 || putative cytoplasmic protein || 368092 -0.01 -0.13 0.13 -1.18 -1.02 -1.49 -1.54 -1.59 -1.92 -2.03 -1.41 -1.64 -1.49 -1.85 SCUT7777 STM1995 || ompS1 || putative porin || 363970 -0.03 -0.02 0.05 -0.64 -0.17 -0.75 -0.47 -0.7 -0.74 -0.58 -0.29 -0.72 -0.25 -0.58 SCUT1864 STM2015 || erfK || putative periplasmic protein || 365217 -0.01 -0.02 0.04 -0.17 -0.38 -0.38 -0.62 -0.41 -0.22 -0.87 -0.42 -0.7 -0.23 -0.43 SCUT7821 STM2080 || udg || UDP-glucose/GDP-mannose dehydrogenase || 362543 0.14 -0.14 0.01 -1.57 -1.16 -1.14 -0.86 -1.54 -1.65 -1.34 -1.05 -0.97 -1.11 -1.13 SCUT7823 "STM2082 || rfbP || LPS side chain defect: bifunctional enzyme: undecaprenol-phosphate galactosephosphotransferase, and O-antigen transfer || 368693" 0.04 -0.23 0.2 -1.3 -1.46 -1.28 -1.66 -1.23 -1.95 -1.63 -1.04 -0.9 -1.25 SCUT7833 "STM2094 || rfbC || dTDP-4,deoxyrhamnose 3,5 epimerase || 363518" 0.14 -0.13 -0.02 -1.14 -0.74 -0.8 -0.78 -1.31 -1.34 -1.16 -0.85 -0.49 -1.11 -1.09 SCUT9566 "STM2094 || rfbC || dTDP-4,deoxyrhamnose 3,5 epimerase || 364272" 0.21 -0.13 -0.09 -1.83 -1.82 -1.07 -1.67 -1.69 -1.58 -2.06 -1.58 -1.29 -1.67 -1.79 SCUT7834 STM2095 || rfbA || dTDP-glucose pyrophosphorylase || 362916 0.37 -0.22 -0.14 -0.67 -0.58 -0.84 -0.9 -1.23 -1.17 -1.11 -0.61 -0.72 -0.77 -1.06 SCUT7836 "STM2097 || rfbB || dTDP-glucose 4,6 dehydratase || 369083" 0.1 -0.1 -1.19 -0.9 -1.04 -1.45 -1.37 -1.37 -1.33 SCUT7874 STM2136 || yegQ || putative protease || 364303 0 -0.07 0.06 -0.46 -1.14 -0.87 -0.73 -1.05 -1.21 -1.16 -1.01 -1.27 -1.07 -1.09 SCUT7876 STM2138 || STM2138 || putative cytoplasmic protein || 363101 -0.17 0.11 0.07 -0.26 -0.21 -0.35 -0.7 -0.53 -0.7 -0.61 -0.49 -0.3 -0.27 -0.55 SCUT7886 STM2148 || STM2148 || putative periplasmic protein || 365291 0.13 -0.05 -0.08 -0.1 -0.35 -0.13 -0.43 -0.29 -0.45 -0.41 -0.19 -0.33 -0.23 -0.26 SCUT7887 STM2149 || stcD || putative outer membrane lipoprotein || 364691 -0.11 -0.01 0.11 -0.41 -0.58 -0.98 -0.77 -0.82 -0.95 -1.11 -0.62 -0.57 -0.86 SCUT9495 STM2149 || stcD || putative outer membrane lipoprotein || 365551 0.15 -0.01 -0.15 -0.21 -0.01 -0.46 -0.66 -0.72 -0.88 -1 -0.53 -0.61 -0.33 -0.75 SCUT7888 STM2150 || stcC || paral putative outer membrane protein || 364085 0.08 -0.18 0.1 -0.8 -0.69 -0.79 -0.73 -0.62 -0.48 -0.87 -0.52 -1.12 -0.83 -0.26 SCUT7893 STM2156A || STM2156A || putative protein || 369280 0.01 -0.01 -0.38 -0.09 -0.59 -1.09 -1.26 -0.65 SCUT7904 "STM2166 || bglX || beta-D-glucoside glucohydrolase, periplasmic || 362249" 0.05 -0.09 0.05 -0.78 -0.71 -0.74 -0.49 -0.88 -0.62 -1.01 -0.8 -1.08 -0.7 -0.99 SCUT7925 STM2187 || yeiA || putative dihydropyrimidine dehydrogenase || 366037 -0.02 0.1 -0.08 -0.35 -0.61 -0.46 -0.54 -0.82 -0.6 -1.17 -0.43 -1.1 -1.04 -0.75 SCUT7947 STM2208 || STM2208 || putative inner membrane protein || 369199 0.38 -0.36 -0.03 -0.67 -0.22 -0.57 -0.52 -0.68 -0.67 -0.62 -0.72 -0.47 -0.31 SCUT7970 STM2235 || STM2235 || putative phage protein || 365252 0.21 -0.1 -0.1 -0.17 -0.37 -0.21 -0.38 -0.42 -0.29 -0.63 -0.34 -0.37 -0.21 -0.51 SCUT2973 "STM2275 || STM2275 || putative regulatory protein, gntR family || 362340" -0.11 0.11 -0.48 -0.75 -0.52 -0.39 -0.77 -0.9 -0.9 -0.35 SCUT8011 STM2294 || yfaZ || putative inner membrane protein || 367877 0 -0.49 -0.76 -0.4 -0.88 -0.6 -0.65 -0.26 -0.79 -0.48 -0.53 SCUT8049 STM2360 || STM2360 || putative diaminopimelate decarboxylase || 362250 -0.09 0.21 -0.13 -0.42 -0.49 -0.59 -0.51 -0.5 -0.48 -0.56 -0.69 SCUT8054 STM2373 || STM2373 || putative cytoplasmic protein || 367464 0.18 0.01 -0.2 -0.26 -0.27 -0.44 -0.6 -0.48 -0.49 -0.72 -0.74 -0.48 -0.27 -0.52 SCUT10178 STM2400 || STM2400 || putative inner membrane protein || 363796 0.2 -0.07 -0.14 -0.31 -0.33 -0.48 -0.46 -0.53 -0.77 -0.72 -0.75 -1.05 SCUT2418 STM2413 || yfeC || putative negative regulator || 368265 -0.04 -0.13 0.18 -0.6 -0.6 -0.56 -0.59 -0.66 -0.67 -0.77 -0.71 -0.77 -0.46 -0.65 SCUT8136 STM2576 || yfhL || putative ferredoxin || 367778 0.18 -0.03 -0.16 -0.59 -0.3 -0.09 -1.58 -0.89 -0.63 -1.19 -0.3 -1.18 -0.54 -1 SCUT8960 STM2585A || STM2585A || Gifsy-1 prophage: similar to transpose || 366234 -0.35 0.13 0.22 -0.2 -0.48 -0.65 -0.41 -0.11 -0.85 -0.56 -0.77 -0.89 -0.96 SCUT8156 STM2646 || yfiD || putative formate acetyltransferase || 364791 -0.08 0.01 0.06 -0.63 -0.63 -1.05 -1.49 -1.62 -1.46 -1.89 -1.23 -1.04 SCUT2017 STM2663 || yfiO || putative lipoprotein || 367370 0.14 -0.09 -0.06 -0.38 -0.32 -0.3 -0.13 -0.24 -0.28 -0.17 -0.12 -0.39 -0.24 -0.3 SCUT9727 STM2680 || STM2680 || putative cytoplasmic protein || 366731 -0.2 -0.11 0.31 -0.93 -1.1 -0.71 -1.09 -0.88 -1.09 -1.45 -1.14 -1.21 -1.34 -1.23 SCUT2088 STM2680 || STM2680 || putative cytoplasmic protein || 367351 -0.07 0.07 -0.79 -0.35 -0.68 -0.94 -1.04 -1 -0.58 -0.83 -0.76 -1 SCUT2074 STM2704 || STM2704 || Fels-2 prophage: similar to genes in P2-like phages || 367578 0.1 -0.12 0.01 -0.49 -0.52 -0.43 -0.63 -0.84 -0.78 -1.47 -0.87 -1.25 -1.92 -1.62 SCUT8931 STM2770 || fljA || Flagellar synthesis: repressor of fliC || 366423 0.03 -0.08 0.06 -1.27 -1.29 -0.94 -1.21 -0.76 -0.88 -0.77 -0.71 -1.15 -0.94 -1.63 SCUT8198 STM2786 || STM2786 || tricarboxylic transport || 364965 -0.12 0.14 -0.03 -0.25 -0.34 -0.22 -0.37 -0.65 -0.6 -0.93 -0.65 -0.71 -0.33 -0.46 SCUT8217 "STM2808 || nrdF || ribonucleoside-diphosphate reductase 2, beta subunit || 368690" -0.04 0.04 -0.16 -0.41 -0.57 -0.3 -0.81 -0.34 -0.94 -0.34 SCUT9842 "STM2811 || proX || ABC superfamily (bind_prot), glycine/betaine/proline transport protein || 365282" 0 0 -0.37 -0.14 -0.59 -0.62 -1.07 -0.76 -0.95 -0.59 -0.36 SCUT1875 "STM2811 || proX || ABC superfamily (bind_prot), glycine/betaine/proline transport protein || 366812" 0.01 -0.01 -0.19 -0.53 -0.06 -0.6 -0.64 -0.63 -0.41 -0.28 SCUT1927 "STM2855 || hypB || hydrogenase-3 accessory protein, assembly of metallocenter || 367919" 0.26 -0.21 -0.04 -0.56 -0.88 -0.73 -0.72 -0.64 -0.57 -1.05 -0.57 -0.88 -0.79 -0.55 SCUT2651 STM2868 || STM2868 || putative cytoplasmic protein || 363565 -0.11 -0.05 0.15 -0.77 -0.99 -0.89 -0.77 -0.81 -1.06 -1.03 -1.55 -1.17 -1 -1.17 SCUT9897 STM2868 || STM2868 || putative cytoplasmic protein || 365838 0 -0.72 -0.54 -0.5 -0.34 -1.02 -0.81 -0.99 -0.99 -0.73 SCUT8252 STM2869 || orgA || putative flagellar biosynthesis/type III secretory pathway protein || 365726 0.15 0.06 -0.22 -1.05 -1.1 -1.04 -0.94 -1.26 -0.87 -1.71 -1.24 -1.78 -1.45 -1.39 SCUT8253 "STM2871 || prgK || cell invasion protein; lipoprotein, may link inner and outer membranes || 365129" 0.12 -0.06 -0.06 -0.46 -0.05 -0.59 -0.54 -0.66 -0.56 -0.63 -0.63 -1.01 -0.76 -0.26 SCUT9054 STM2872 || prgJ || cell invasion protein; cytoplasmic || 363266 0.07 0 -0.08 -0.93 -0.71 -1.34 -1.44 -0.47 -0.21 -1.83 -1.22 -1.47 -1.34 -1.08 SCUT8254 STM2872 || prgJ || cell invasion protein; cytoplasmic || 364529 0.03 -0.12 0.09 -0.62 -0.58 -0.93 -0.56 -0.46 -0.54 -1.1 -0.79 -1.32 -0.79 -0.97 SCUT10309 STM2872 || prgJ || cell invasion protein; cytoplasmic || 367051 0.02 -0.17 0.14 -0.91 -0.85 -1.37 -1.35 -0.86 -0.28 -1.92 -1.55 -1.58 -1.21 -1.35 SCUT8255 STM2873 || prgI || cell invasion protein; cytoplasmic || 363934 0.07 -0.07 -0.17 -0.47 -0.41 -0.56 -0.82 -0.51 -0.61 SCUT9087 STM2874 || prgH || cell invasion protein || 368016 0.29 -0.01 -0.28 -1.16 -0.64 -0.95 -0.56 -1.21 -1.41 -1.19 -0.95 -1.1 -0.98 -1.32 SCUT9170 STM2876 || hilA || invasion genes transcription activator || 368576 0.32 -0.45 0.14 -1.02 -0.97 -0.99 -0.95 -1.23 -1.05 -1.33 -0.84 -1.38 -1.16 -1.46 SCUT8261 STM2881 || iacP || putative acyl carrier protein || 368526 -0.07 0.03 0.03 -1.11 -0.8 -1.15 -1.75 -1.44 -2.1 -1.48 -1.34 -1.12 -1.31 SCUT8262 STM2882 || sipA || cell invasion protein || 367917 0.02 -0.02 -0.61 -0.25 -0.44 -0.86 -0.89 -0.82 -0.75 -0.42 -0.65 -0.45 SCUT8265 STM2885 || sipB || cell invasion protein || 366121 0.11 0.01 -0.13 -0.83 -1.01 -1.27 -0.87 -0.95 -0.96 -1.14 -0.72 -0.87 -0.66 -0.85 SCUT8266 STM2886 || sicA || surface presentation of antigens; secretory proteins || 365516 0.12 0.04 -0.17 -0.96 -0.16 -0.59 -0.52 -0.78 -1.05 -0.71 -0.56 -0.33 SCUT8268 STM2888 || spaR || surface presentation of antigens; secretory proteins || 364300 0.2 -0.03 -0.16 -0.86 -0.74 -0.93 -0.64 -1.48 -1.38 -1.35 -0.95 -1.33 -1.19 -1.14 SCUT9022 STM2888 || spaR || surface presentation of antigens; secretory proteins || 365267 0.17 0.03 -0.19 -0.69 -0.41 -0.38 -0.43 -0.75 -0.69 -0.43 -0.46 -1.04 -0.84 -0.54 SCUT8271 STM2891 || spaO || surface presentation of antigens; secretory proteins || 363350 -0.06 0.02 0.05 -1.39 -0.65 -1.39 -0.79 -1.52 -1.34 -1.01 -1.19 -1.05 -1.82 SCUT9015 STM2891 || spaO || surface presentation of antigens; secretory proteins || 368627 -0.04 -0.02 0.06 -0.87 -0.56 -0.56 -1.09 -1.07 -1.16 -0.99 -0.72 -0.81 -0.68 -1 SCUT9045 STM2893 || invI || surface presentation of antigens; secretory proteins || 367830 0 -0.56 -0.42 -0.63 -0.76 -1.1 -0.99 -0.58 -0.67 -0.97 -0.79 SCUT8273 STM2894 || invC || surface presentation of antigens; secretory proteins || 369505 0.09 -0.12 0.04 -1.66 -1.12 -1.67 -1.56 -1.8 -1.84 -2.46 -2.04 -2.29 -2.06 SCUT2063 STM2897 || invE || invasion protein || 365992 0.16 -0.12 -0.03 -1.14 -0.69 -2.33 -2.33 -1.34 -1.46 -1.87 -1.32 -1.78 -1.94 -2.29 SCUT9559 STM2897 || invE || invasion protein || 367657 0.11 -0.05 -0.05 -1.4 -0.9 -2.5 -2.11 -1.6 -1.39 -1.82 -1.67 -2.13 -2.03 -2.16 SCUT8887 STM2898 || invG || invasion protein; outer membrane || 367847 0.32 -0.19 -0.14 -0.55 -0.87 -0.72 -0.61 -0.28 -0.52 -0.71 -0.42 -0.96 -0.56 -0.55 SCUT8275 STM2898 || invG || invasion protein; outer membrane || 368305 0.15 -0.04 -0.1 -1.17 -0.79 -1.38 -1.37 -1.7 -1.64 -2.06 -1.26 -1.1 -1.82 -0.92 SCUT9298 STM2906 || STM2906 || putative cytoplasmic protein || 366673 0.03 -0.03 -1.59 -2.21 -1.17 -1.17 -1.41 -0.42 -0.35 -0.8 -1.25 SCUT8280 "STM2912 || STM2912 || putative transcriptional regulators, LysR family || 366145" 0.07 -0.07 -0.53 -0.71 -0.89 -0.32 -0.44 -1.08 -0.45 -0.32 -0.44 SCUT1701 STM2945 || sopD || secreted protein in the Sop family; transferred to eukaryotic cells || 362723 0.13 -0.12 -0.01 -0.89 -0.6 -0.83 -0.87 -0.71 -0.89 -1.35 -0.59 -0.84 -1.16 -1.28 SCUT8335 STM3030 || STM3030 || putative periplasmic protein || 365453 0.07 0.05 -0.11 -0.91 -0.52 -0.93 -1.42 -1.07 -1.52 -1.47 -0.78 -0.91 -1.03 -0.64 SCUT8344 STM3052 || STM3052 || putative outer membrane protein || 368243 0.14 -0.03 -0.12 -1.18 -0.9 -1.32 -1.26 -1.12 -0.98 -1.3 -0.84 -1.25 -0.77 -0.98 SCUT8365 STM3096 || yqgE || putative transcriptional regulator || 364648 0.02 -0.1 0.07 -0.73 -0.42 -0.61 -0.91 -0.55 -0.89 -0.5 -0.4 -0.74 -0.32 -0.53 SCUT8381 STM3138 || STM3138 || putative methyl-accepting chemotaxis protein || 364069 0.21 -0.29 0.08 -0.84 -0.87 -0.85 -0.94 -0.69 -0.89 -0.79 -0.82 -0.83 SCUT8409 STM3190|ygiE_int_STM3191 || STM3190|ygiE_int_STM3191 || || 362371 0.21 -0.18 -0.02 -1.21 -0.73 -1.07 -1.7 -1.15 -1.74 -1.79 -1.34 -1.64 -0.9 -1.77 SCUT2600 "STM3244 || tdcB || threonine dehydratase, catabolic || 367965" 0.17 -0.17 -0.27 -0.19 -0.27 -0.45 -0.47 -0.48 -0.75 -0.23 -0.75 -0.67 -0.52 SCUT8460 STM3277 || STM3277 || putative inner membrane protein || 366199 -0.13 -0.13 0.25 -0.63 -0.44 -0.81 -0.58 -0.52 -0.64 -0.67 -0.98 -0.79 -0.73 SCUT2102 STM3413 || yhdN || putative cytoplasmic protein || 366739 -0.27 0.14 0.12 -0.46 -0.63 -0.54 -0.34 -1.09 -0.48 -0.43 -0.27 -0.75 -0.53 -0.59 SCUT2180 "STM3475 || nirD || nitrite reductase, small subunit || 363343" 0 -0.69 -0.5 -0.41 -0.33 -0.28 -0.46 -0.5 -0.51 -0.72 SCUT2248 STM3516 || STM3516 || putative cytoplasmic protein || 363024 -0.01 -0.01 0.01 -0.36 -0.32 -0.73 -0.53 -0.68 -0.78 -0.36 -0.61 -0.5 -0.38 SCUT8699 STM3534 || glgP || glycogen phosphorylase || 364396 -0.04 0.04 -0.33 -0.11 -0.29 -0.45 -0.29 -0.28 -0.29 SCUT1933 STM3547 || STM3547 || putative transcriptional regulator of sugar metabolism || 365155 0.15 -0.03 -0.12 -0.34 -0.5 -0.36 -0.67 -0.57 -0.53 -0.76 -0.62 -0.8 -0.77 -0.7 SCUT2403 "STM3600 || STM3600 || putative sugar kinases, ribokinase family || 369094" 0.03 -0.09 0.06 -0.77 -0.77 -0.49 -0.24 -0.9 -0.78 -1.05 -0.72 -1.66 -1.65 -1.29 SCUT8798 "STM3714 || rfaK || putative hexose transferase, lipopolysaccharide core biosynthesis || 363528" 0.19 -0.08 -0.12 -1.22 -0.77 -1.23 -1.09 -1.5 -1.35 -1.39 -1.08 -1.01 -1.1 -0.83 SCUT9405 "STM3714 || rfaK || putative hexose transferase, lipopolysaccharide core biosynthesis || 367948" 0.22 0.05 -0.28 -0.95 -0.76 -1.31 -1.29 -1.24 -0.8 -1.39 -1.29 -1.39 -0.97 -1.17 SCUT8799 STM3715 || rfaZ || lipopolysaccharide core biosynthesis || 362926 0.1 -0.08 -0.02 -0.65 -0.07 -0.36 -0.77 -0.99 -1.04 -0.94 -0.55 -0.52 -0.52 -0.51 SCUT8888 "STM3719 || rfaB || UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase || 367244" 0.17 -0.11 -0.06 -0.97 -0.8 -0.98 -0.93 -1.08 -1.02 -1.48 -0.95 -0.99 -0.69 -0.88 SCUT10139 STM3764 || mgtC || Mg2+ transport protein || 369173 0 -1.67 -1.45 -1.74 -1.78 -1.5 -1.6 -1.96 -1.92 SCUT8827 STM3764 || mgtC || Mg2+ transport protein || 369451 0 -1.41 -0.92 -1.03 -1.1 -1.16 -1.15 -1.21 -1.17 SCUT10047 STM3771 || STM3771 || putative phosphotransferase system enzyme IIB || 366672 0 -0.4 -0.66 -0.36 -0.75 -0.67 -0.47 -0.82 -0.65 -0.66 -0.06 -0.41 SCUT8839 STM3781 || STM3781 || putative sugar (pentulose and hexulose) kinase || 363073 0.2 -0.35 0.15 -0.39 -0.22 -0.55 -0.38 -0.67 -0.35 -1.15 -0.57 -1.01 -0.38 -0.65 SCUT8842 "STM3785 || STM3785 || putative regulatory protein, gntR family || 369477" -0.01 -0.16 0.18 -0.61 -0.4 -1.01 -1.54 -1.69 -2.02 -1.1 -1.12 -1.31 -1.37 -1.21 SCUT8861 STM3804 || yidG || putative inner membrane protein || 367099 0.03 -0.03 0.01 -0.23 -0.71 -0.68 -0.71 -0.88 -0.59 -0.8 -1.44 -0.85 SCUT8865 STM3809 || ibpA || small heat shock protein || 364688 -0.12 -0.01 0.14 -0.8 -0.72 -0.96 -0.92 -0.93 -0.55 -1.01 -0.69 -1.57 -0.95 -0.98 SCUT9193 STM3927 || STM3927 || putative inner membrane protein || 363785 0.35 -0.34 0 -0.54 -0.89 -0.34 -0.53 -0.45 -0.21 -0.68 -0.29 -0.34 -0.3 -0.38 SCUT9104 "STM3970 || ubiE || S-adenosylmethionine : 2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase || 365586" 0.03 -0.05 0.03 -0.17 -0.53 -0.83 -0.89 -0.85 -0.65 -0.75 -0.5 -0.82 -0.26 -0.13 SCUT2159 STM3998 || yihG || putative endonuclease || 366085 0.07 -0.08 0.02 -0.25 -0.06 -0.42 -0.38 -0.5 -0.51 -0.61 -0.42 -0.55 -0.31 -0.1 SCUT3017 STM4079 || yneC || putative inner membrane protein || 363168 -0.21 0.05 0.15 -0.79 -0.56 -0.46 -1.11 -0.92 -0.76 -1.17 -0.87 -0.7 -0.36 -0.57 SCUT2336 STM4102 || STM4102 || putative inner membrane protein || 367941 0.13 0.05 -0.19 -0.76 -0.62 -0.89 -1.09 -0.98 -1 -0.7 -0.22 -0.74 -0.37 -0.62 SCUT6202 STM4128 || yijD || putative inner membrane protein || 363197 0.14 -0.14 -0.28 -0.51 -0.54 -0.41 0.04 -0.56 -0.25 SCUT7012 STM4206 || STM4206 || putative phage glucose translocase || 364113 -0.13 0.05 0.09 -1.16 -1.18 -0.06 -1.08 -0.66 -1.63 -1.11 -1.15 -1.51 -0.75 SCUT10215 STM4206 || STM4206 || putative phage glucose translocase || 365738 0.11 -0.11 -0.44 -0.37 0.29 -0.93 -0.87 -0.88 -0.32 -0.89 -1.05 -0.75 SCUT9603 STM4242 || STM4242 || putative outer membrane or exported || 366227 0.07 -0.07 -0.23 -0.49 -0.38 -0.97 -0.42 -0.82 -0.59 -0.8 -0.65 SCUT7063 "STM4260 || STM4260 || membrane permease, predicted cation efflux pump || 367088" -0.06 -0.04 0.1 -1.12 -1.41 -1.47 -1.61 -1.8 -1.74 -2.06 -1.59 -1.95 -1.63 -1.45 SCUT7095 STM4293 || yjdB || putative integral membrane protein || 365075 0.06 0.08 -0.13 -0.47 -0.52 -0.8 -0.6 -0.56 -0.59 -0.82 -0.74 -0.52 -0.26 SCUT9120 STM4319 || phoN || non-specific acid phosphatase || 365003 0.1 -0.15 0.04 -0.54 -0.5 -0.7 -1.03 -1.12 -1.35 -1.27 -0.7 -1.41 -0.97 -1.26 SCUT9901 STM4413 || STM4413 || putative imidazolonepropionase and related amidohydrolases || 363030 0 -0.2 -0.46 -0.37 -0.31 -0.64 -0.32 -0.73 -0.91 -0.67 SCUT7200 STM4413 || STM4413 || putative imidazolonepropionase and related amidohydrolases || 367573 0.09 -0.09 -0.39 -0.32 -0.03 -0.17 -0.43 -0.19 -0.73 -0.25 -0.96 -0.63 -0.66 SCUT7218 "STM4433 || STM4433 || putative thiamine pyrophosphate-requiring enzyme, oxidoreductase family || 364926" 0.24 0.03 -0.28 -0.49 -0.43 -0.39 -0.39 -1 -0.7 -0.85 -0.59 -0.83 -0.47 -0.27 SCUT7265 "STM4485 || idnK || D-gluconate kinase, thermosensitive || 362942" -0.05 0.08 -0.02 -0.53 -0.08 -0.89 -1.25 -1.06 -0.87 -1.45 -1.43 -1.34 -1.01 -1.05 SCUT7285 STM4509 || STM4509 || putative cytoplasmic protein || 367328 0.01 -0.01 -0.92 -0.81 -1.04 -0.79 -1.47 -1.37 -1.19 -1.11 -0.86 -1.25 SCUT9508 STM4569 || deoB || phosphopentomutase || 364679 0.07 0.1 -0.18 -0.36 -0.54 -0.2 -0.74 -0.56 -0.45 -0.83 -0.11 -0.86 -0.67 -0.8 SCUT9115 PSLT038 || spvC || Salmonella plasmid virulence: hydrophilic protein || 367165 0.11 0.49 -0.59 -0.11 0.84 -0.67 -0.58 -0.16 -0.26 -0.75 -0.36 -1.12 -1.41 -2.16 SCUT8981 PSLT039 || spvB || Salmonella plasmid virulence: hydrophilic protein || 362636 0.64 -0.03 -0.61 0.19 0.67 -0.48 -1.04 -0.93 -0.49 -1.01 -0.53 -1.01 -1.3 -1.45 SCUT6645 PSLT039 || spvB || Salmonella plasmid virulence: hydrophilic protein || 364263 0.43 0.38 -0.81 0.84 1.25 -0.94 -1.29 0.14 -0.28 -1.85 -1.05 -2.48 -2.14 -3.17 SCUT10254 PSLT039 || spvB || Salmonella plasmid virulence: hydrophilic protein || 367740 0.35 0.33 -0.67 1.06 1.6 -0.7 -0.88 0.06 0.12 -1.17 -0.91 -2.23 -1.68 -3 SCUT6678 PSLT072 || PSLT072 || putative transglycosylase || 369026 0.38 0.46 -0.85 2.29 -0.77 -1.06 0.22 0.55 -1.52 -1.36 -2.52 -2.17 -3.24 SCUT2450 STM0034 || STM0034 || putative outer membrane or exported protein || 367111 0.3 -0.2 -0.1 -0.37 -0.33 -0.85 -0.75 -0.08 0.18 -0.84 -0.51 -1.24 -0.94 -0.61 SCUT7419 STM0097 || polB || DNA polymerase II and and 3' --> 5' exonuclease || 368752 0.01 -0.09 0.09 -0.02 -0.02 -0.13 -0.35 -0.25 -0.37 -0.3 -0.35 -0.45 -0.3 -0.34 SCUT7449 STM0158 || acnB || aconitate hydratase 2 || 367958 0.03 -0.03 -0.28 -0.09 -0.67 -0.85 -1.03 -0.42 -0.89 -0.63 -1.01 SCUT6734 STM0262 || yafS || putative SAM-dependent methyltransferase || 368582 0.11 0.02 -0.13 -0.19 -0.13 -0.75 -0.31 -0.59 -0.73 -0.67 -0.82 -0.73 -0.91 -0.38 SCUT9731 STM0303 || ybeJ || putative xylanase/chitin deacetylase || 365161 0.02 -0.02 0.55 0.52 -0.35 -0.65 -0.58 -0.84 -0.54 -0.38 -0.43 -0.67 SCUT6767 STM0303 || ybeJ || putative xylanase/chitin deacetylase || 365981 0.09 -0.2 0.12 0.58 0.63 -0.34 -0.61 -0.5 -0.29 -0.69 -0.63 -0.35 -0.38 -0.62 SCUT9829 STM0374 || yaiV || putative inner membrane protein || 364055 -0.12 -0.02 0.13 1.28 1.64 -0.61 -1.21 -1.09 -0.83 -2.11 -1.32 -1.44 -1.24 -1.37 SCUT6820 STM0374 || yaiV || putative inner membrane protein || 367347 0.13 -0.36 0.22 1.26 1.22 -0.52 -0.53 -0.7 -0.68 -1.47 -0.77 -0.64 -0.98 -1.07 SCUT3035 "STM0390 || aroM || protein of aro operon, regulated by aroR || 368736" 0.11 -0.12 0 -0.15 -0.32 -0.56 -0.76 -0.72 -0.78 -0.87 -0.65 -0.57 -0.26 -0.41 SCUT9331 "STM0430 || phnR || 2-aminoethylphosphonate transport, repressor || 363658" 0 -0.09 -0.11 -0.4 -0.6 -0.53 -0.42 -0.17 -0.34 SCUT6848 STM0431 || phnW || 2-aminoethylphosphonate transport || 366908 -0.02 0.02 -0.19 -0.17 -0.47 -0.72 -1.01 -0.61 -0.78 SCUT2173 STM0438 || STM0438 || putative TPR repeat protein || 366714 0.09 -0.03 -0.07 0.38 0.25 -0.8 -0.73 -0.5 -0.69 -0.74 -0.28 -0.41 -0.59 SCUT6861 "STM0463 || amtB || putative Amt family, ammonium transport protein || 368132" 0 -0.26 -0.17 -0.5 -0.75 -0.66 -0.65 -0.87 SCUT6905 STM0550 || fimY || putative regulatory protein || 365851 0.03 -0.03 0.46 0.59 -0.93 -0.92 -0.7 -0.65 -0.58 SCUT2733 STM0855 || STM0855 || putative electron transfer flavoprotein beta subunit || 363897 0.01 -0.13 0.13 -0.31 0.55 -1.35 -1.44 -0.97 -0.72 -1.94 -1.78 -1.31 SCUT9465 STM0927 || STM0927 || Fels-1 prophage; putative tail assembly protein || 366342 0.1 0.28 -0.38 0.83 0.84 -0.4 -0.45 -0.59 -0.33 -0.57 -0.44 -0.85 -0.7 -0.8 SCUT6376 STM0927 || STM0927 || Fels-1 prophage; putative tail assembly protein || 367262 0.11 -0.06 -0.06 0.3 -0.03 -0.76 -0.86 -1.03 -1.17 -1 -1.24 -1.08 -1.27 SCUT1912 "STM0974 || focA || putative FNT family, formate transporter (formate channel 1) || 368738" 0.06 -0.05 -0.02 -0.2 -0.34 -0.35 -0.78 -0.57 -0.48 -1.04 -0.52 -0.93 -0.56 -0.7 SCUT5982 STM1026 || STM1026 || Gifsy-2 prophage || 367266 0.31 -0.55 0.24 0.74 1.25 -1.02 -1.36 -1.76 -1.89 -1.92 -1.58 -1.75 -1.44 -1.53 SCUT10043 STM1026_int_STM1027-STM1027 || STM1026_int_STM1027-STM1027 || || 369080 -0.21 0.06 0.14 0.92 0.54 -0.13 -0.58 -0.45 -0.38 -0.72 -0.54 -0.49 -0.57 -0.62 SCUT6407 STM1050 || STM1050 || Gifsy-2 prophage; tail fiber assembly like-protein || 364610 0.08 -0.07 0 -0.05 0.18 -1.07 -0.92 -1.1 -1.12 -1.44 -1.05 -1.72 -1.24 -1.52 SCUT3126 STM1051 || sseI || Gifsy-2 prophage; putative type III secreted protein || 364490 0.01 0.02 -0.03 1.63 2.08 -0.98 -1.04 -0.35 -0.38 -1.33 -0.78 -1 -1 SCUT2416 STM1131 || STM1131 || putative outer membrane protein || 369461 0.1 -0.33 0.22 -0.29 -0.11 -0.75 -1.4 -1.1 -1.07 -1.53 -0.97 -0.78 -1.25 -1.56 SCUT6459 STM1160 || solA || putative sarcosine oxidase || 366990 0.21 -0.15 -0.06 -0.09 -0.11 -0.46 -0.58 -0.75 -0.5 -0.5 -0.9 -0.76 -0.58 SCUT6520 STM1273 || STM1273 || putative nitric oxide reductase || 364373 0.15 -0.2 0.06 0.39 0.35 -0.41 -0.46 -0.5 -0.44 -0.53 -0.52 -0.5 -0.18 -0.55 SCUT10190 STM1280 || yeaL || putative inner membrane protein || 365631 -0.2 0.2 0.07 0.29 0.36 0.11 -0.38 -0.47 -0.6 -0.43 -0.53 SCUT6526 STM1283 || yeaJ || putative Methyl-accepting chemotaxis protein; Diguanylate cyclase/phosphodiesterase domain 1 || 368127 -0.05 -0.08 0.13 0.34 0.27 -0.31 -0.2 -0.66 -0.38 -0.59 -0.5 -1.33 -0.63 -0.79 SCUT1947 STM1364 || ydiK || putative permease || 364932 0.1 -0.14 0.04 -0.21 -0.24 -0.6 -0.61 -0.76 -0.68 -0.68 -0.52 -0.8 -0.59 -0.45 SCUT6581 STM1381 || orf245 || putative cytoplasmic protein || 369535 0.08 -0.36 0.29 -0.11 -0.18 -0.64 -0.94 -0.09 0.21 -1.1 -0.6 -1.08 -0.57 -0.66 SCUT10155 "STM1382 || orf408 || putative regulatory protein, deoR family || 368591" -0.15 0.15 -0.05 -0.13 -0.49 -0.54 -0.53 -0.31 -0.6 -0.63 -0.4 -0.41 -0.23 SCUT7526 STM1549 || STM1549 || putative translation initiation inhibitor || 363933 -0.01 -0.35 0.37 -0.5 -0.52 -0.91 -1.46 -1.08 -0.98 -1.54 -1.25 -1.17 -1.09 -1.26 SCUT10264 STM1551 || STM1551 || putative cytoplasmic protein || 362558 0.18 -0.18 0.04 0.46 -0.49 -0.43 -0.62 -0.61 -0.77 -0.25 -0.93 -1.05 SCUT7527 STM1551 || STM1551 || putative cytoplasmic protein || 363328 0.09 0.16 -0.25 0.03 0.14 -0.68 -0.46 -0.71 -0.38 -0.87 -0.52 -0.74 -0.67 -0.64 SCUT7547 STM1585 || STM1585 || putative outer membrane lipoprotein || 367709 0.02 0.12 -0.15 0.02 0.17 -0.46 -0.29 -0.58 -0.45 -0.7 -0.28 -0.42 -0.41 -0.25 SCUT1826 STM1640 || ydcF || putative inner membrane protein || 362626 0.1 -0.04 -0.06 0.06 0.25 -0.28 -0.36 -0.33 -0.25 -0.29 -0.24 -0.22 -0.13 SCUT7692 STM1868 || mig-3 || Homology to phage-tail assembly proteins || 365462 0.07 -0.21 0.13 0.84 0.75 -0.26 -0.74 -0.19 -0.15 -1.1 -0.71 -0.79 -1.14 -0.97 SCUT7736 STM1934 || STM1934 || putative outer membrane lipoprotein || 363183 0.04 -0.06 0.02 0.94 1.02 -0.57 -0.45 -0.77 -0.53 -0.93 -0.73 -0.79 -0.71 -1.1 SCUT10066 STM1934 || STM1934 || putative outer membrane lipoprotein || 364274 -0.02 0.06 -0.03 1.21 0.95 -0.97 -0.98 -1.16 -0.74 -1.78 -1.15 -1.59 -1.08 -1.59 SCUT7790 STM2032 || cbiD || synthesis of vitamin B12 adenosyl cobalamide precursor || 365193 0.09 0.05 -0.13 -0.15 -0.21 -0.49 -0.64 -0.76 -1.04 -0.8 -0.43 -0.85 -0.67 -0.14 SCUT7837 "STM2098 || galF || putative glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase), non-catalytic subunit || 368485" 0.2 0.02 -0.21 0.05 0.15 -0.43 -0.36 -0.87 -0.53 -0.69 -0.78 -0.69 -0.77 SCUT7838 STM2099 || wcaM || putative colanic acid biosynthesis protein || 367872 0.05 -0.09 0.03 0.38 0.59 -0.51 -1.07 -0.97 -0.81 -1.85 -1.13 -0.97 -1 -0.43 SCUT7875 STM2137 || STM2137 || putative cytoplasmic protein || 363705 -0.34 0.34 -0.11 0.17 -0.83 -0.8 -0.67 -0.41 -1.16 -0.98 -0.82 -0.88 -0.9 SCUT7936 STM2197 || STM2197 || putative phosphoserine phosphatase || 367625 -0.09 0.08 0.02 0.73 1.15 -0.95 -0.89 -1.18 -1.2 -1.09 -0.97 -0.41 -0.27 -0.1 SCUT10154 STM2197 || STM2197 || putative phosphoserine phosphatase || 369198 -0.12 -0.24 0.37 0.86 1.13 -0.7 -0.9 -0.97 -1.05 -1.23 -1.02 -1.02 -0.69 -0.37 SCUT2273 STM2393 || yfdC || putative transport || 365239 -0.03 0.05 -0.01 -0.27 0.04 -0.22 -0.58 -0.38 -0.61 -0.91 -0.65 -0.88 -0.6 -0.74 SCUT9440 STM2395 || pgtE || Phosphoglycerate transport: outer membrane protein E || 364979 0.14 0.02 -0.17 0.07 0.3 -0.42 -0.72 -1.34 -1.29 -1.32 -0.81 -1.69 -1.41 -1.6 SCUT8067 STM2395 || pgtE || Phosphoglycerate transport: outer membrane protein E || 367835 0.01 -0.01 0.05 0.04 -0.53 -0.52 -1.47 -1.29 -1.09 -1.45 -1.23 SCUT8139 STM2586 || STM2586 || Gifsy-1 prophage: similar to phage tail assembly protein || 365975 0.05 -0.04 -0.01 0.87 1.3 -0.53 -0.58 -0.49 -0.2 -0.94 -0.87 -0.79 -0.69 -1.08 SCUT9798 STM2586 || STM2586 || Gifsy-1 prophage: similar to phage tail assembly protein || 366706 0.19 -0.02 -0.18 0.73 0.01 -0.43 -0.71 -0.65 -1.31 -0.76 -1.32 -1.04 -1.41 SCUT8143 STM2596 || STM2596 || Gifsy-1 prophage: similar to minor tail protein || 364405 0.18 0.01 -0.2 0.65 0.79 -1.13 -0.1 0.11 -1.49 -0.86 -1.68 -1.35 -1.46 SCUT8144 STM2597 || STM2597 || Gifsy-1 prophage: similar to major tail protein || 363808 -0.01 -0.01 0.03 0.55 0.9 -0.37 -0.37 -0.18 -0.6 -0.44 -0.91 -0.83 -0.86 SCUT6011 STM2614 || STM2614 || Gifsy-1 prophage || 368918 0.05 -0.17 0.13 0.88 0.9 -1.42 -1.68 -1.8 -1.59 -2.1 -1.83 -1.87 -1.73 -1.54 SCUT6017 STM2626 || STM2626 || Gifsy-1 prophage: similar to replication protein 15 || 365299 -0.12 0.12 0.65 0.83 -0.09 -0.84 -0.78 -0.67 -0.53 -0.35 -0.5 SCUT6042 STM2673 || rplS || 50S ribosomal subunit protein L19 || 367521 0.02 -0.29 0.26 -0.19 -0.1 -0.7 -0.56 -0.87 -0.63 -0.67 -0.46 -0.44 -0.39 -0.57 SCUT8201 STM2790 || ygaF || paral putative sarcosine oxidase-like protein || 362750 0.12 -0.04 -0.09 0.38 0.31 -0.22 -0.27 -0.6 -0.48 -0.66 -0.19 -0.51 -0.26 -0.39 SCUT8208 STM2796 || yqaE || putative YqaE family transport protein || 365912 0.34 0.01 -0.36 0.18 0.28 -0.08 -0.36 -0.37 -0.29 -0.71 -0.59 -0.62 -0.54 SCUT9198 "STM2867 || hilC || bacterial regulatory helix-turn-helix proteins, araC family || 368139" 0.01 -0.28 0.26 0.88 0.76 -0.98 -1.16 -1.34 -1.05 -1.58 -1.06 -0.68 -0.37 -1.02 SCUT8263 STM2883 || sipD || cell invasion protein || 367322 0.35 -0.23 -0.12 0.51 0.53 -0.29 -0.12 -0.54 -0.63 -0.68 -0.35 -0.52 -0.46 -0.5 SCUT8886 STM2883 || sipD || cell invasion protein || 368460 0.25 -0.3 0.04 0.51 0.6 -0.44 -0.43 -0.95 -0.85 -0.9 -0.53 -0.74 -0.57 -0.46 SCUT8277 STM2907 || pphB || serine/threonine specific protein phosphatase 2 || 367100 0.02 -0.14 0.12 2.61 2.68 -0.88 -1.27 -2.07 -1.76 -2.12 -1.6 -2.07 -1.64 -1.83 SCUT9679 STM3017 || kduD || 2-deoxy-D-gluconate 3-dehydrogenase || 363191 0 -0.01 0.02 -0.06 -0.07 -0.53 -0.65 -0.84 -0.8 -0.65 -0.61 -0.51 -0.12 -0.2 SCUT2020 "STM3033 || STM3033 || putative nucleic acid-binding protein, contains PIN domain || 366406" 0.13 0.14 -0.27 0.4 0.15 -0.29 -0.37 -0.35 -0.37 -0.22 -0.36 -0.5 -0.17 -0.39 SCUT8336 STM3036 || STM3036 || putative inner membrane protein || 364848 0.02 -0.1 0.07 -0.25 0.17 -0.39 -1.2 -0.93 -0.68 -0.99 -1.09 -1.16 -1.04 -1.37 SCUT8411 STM3192 || STM3192 || putative arylsulfate sulfotransferase || 369373 0.02 -0.1 0.09 0.49 0.77 -0.94 -0.81 -1.04 -1.02 -1.47 -1.36 -1.35 -1.19 -0.99 SCUT2732 STM3245 || tdcA || transcriptional activator of tdc operon (LysR family) || 364492 -0.01 -0.18 0.19 0.65 0.5 -1.27 -1.43 -0.47 -0.14 -1.32 -0.89 -1.22 -0.97 -1.61 SCUT2199 STM3510 || yhgH || putative amidophosphoribosyltransferase || 367472 0.08 -0.02 -0.07 0.07 0.24 -0.21 -0.37 -0.39 -0.56 -0.61 -0.16 -0.48 -0.33 -0.49 SCUT2513 STM3532 || STM3532 || putative dihydrodipicolinate synthetase || 362446 0.03 -0.03 0.68 0.23 -0.36 -0.67 -0.73 -0.28 -0.63 -0.47 SCUT8705 STM3548 || STM3548 || putative cytoplasmic protein || 367758 -0.02 -0.13 0.14 0.3 0.68 -1.07 -1.3 -0.7 -0.61 -1.77 -1.34 -1.81 -1.44 -1.36 SCUT8768 STM3664 || malS || alpha-amylase || 364338 -0.06 0.06 0.13 0.04 -0.36 -0.56 -0.33 -0.58 -0.44 -0.37 -0.21 SCUT8774 STM3673 || yiaO || putative dicarboxylate-binding periplasmic protein || 368938 0.2 0.05 -0.26 1.74 2.01 -0.58 -1.02 -1.05 -0.96 -0.41 -0.8 -1.19 -1.31 SCUT1820 "STM3736 || STM3736 || putative transcriptional regulator, LysR family || 366247" 0 0.27 0.13 -0.25 -0.38 -0.26 -0.6 -0.33 -0.42 SCUT8822 STM3758 || fidL || putative inner membrane protein || 365104 -0.13 0.12 0.01 0.55 0.79 -0.77 -0.66 -0.68 -0.54 -1.01 -0.65 -0.72 -0.18 SCUT8840 STM3782 || STM3782 || putative PTS system galactitol-specific enzyme IIC component || 363327 0.13 -0.16 0.02 0.85 0.71 -0.53 -0.52 -0.29 0.04 -0.7 -0.45 -0.94 -0.67 -0.69 SCUT6060 STM3821 || torD || cytoplasmic chaperone which interacts with TorA || 365721 -0.01 -0.12 0.13 -0.11 0.21 -1.15 -0.72 -1.18 -1.69 -1.48 -1.58 -1.32 -1.27 -1.01 SCUT9046 STM3906 || STM3906 || putative cytoplasmic protein || 367227 0.15 -0.06 -0.09 0.04 0.5 -0.57 -0.69 -0.72 -0.92 -1 -0.7 -0.47 -0.39 SCUT8507 STM3910 || ppiC || peptidyl-prolyl cis-trans isomerase C (rotamase C) || 369474 0.01 -0.04 0.03 0.95 1.1 -0.65 -0.86 -0.96 -0.92 -0.82 -0.91 -0.85 -0.43 -0.69 SCUT1834 STM4011 || STM4011 || putative inner membrane protein || 366025 -0.03 0.02 0.02 0.17 0.05 -0.44 -0.82 -1.43 -1.45 -1.01 -0.55 -1.16 -0.82 -0.45 SCUT6138 STM4014 || STM4014 || putative periplasmic protein || 367616 0.15 -0.05 -0.1 -0.01 -0.11 -0.54 -0.77 -1.34 -1.72 -1.17 -1.3 -2.16 -1.76 -1.63 SCUT6161 STM4051 || STM4051 || putative outer membrane protein || 363656 0.11 0.05 -0.16 -0.42 -1.13 -1.02 -1 -1.1 -1.51 -1.43 -1.45 -1.04 -1.33 SCUT8885 STM4159 || thiH || deoxyxylulose-5-P + thi-S-COSH + tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole-P + 4-hydroxy-benzyl-alcohol + C1 of tyrosine || 369058 0.15 -0.07 -0.07 0.85 0.48 -0.07 -0.55 -0.07 -0.43 -0.83 -0.3 -0.79 -0.75 -0.61 SCUT7021 STM4214-STM4215 || STM4214-STM4215 || || 366917 0.22 -0.2 -0.03 -0.28 -0.48 -2.52 -2.26 -2.04 -1.75 -1.72 -1.91 -2.53 -2.39 -0.89 SCUT7022 STM4215 || STM4215 || putative cytoplasmic protein || 366301 0.03 -0.1 0.08 -0.2 -0.48 -2 -1.96 -2.13 -1.82 -1.77 -1.75 -2.55 -2.17 -0.98 SCUT9166 STM4261 || STM4261 || putative inner membrane protein || 362764 0.26 -0.28 0.03 -0.11 -0.12 -0.87 -0.58 -0.85 -0.39 -0.7 -0.39 -0.97 -0.64 -0.3 SCUT9068 STM4261 || STM4261 || putative inner membrane protein || 363035 -0.06 -0.23 0.28 0.33 0.67 -0.64 -0.8 -1.02 -1.31 -1.37 -0.75 -1.65 -1.29 -0.98 SCUT7066 STM4264 || yjcC || putative diguanylate cyclase/phosphodiesterase || 365274 -0.01 0.01 0.23 0.2 -0.39 -0.5 -0.17 -0.13 -1.11 -0.79 -1.3 -1.35 -1.14 SCUT7085 STM4284 || yjcO || putative TPR repeat protein || 362881 0.08 0.09 -0.17 0.61 0.66 -0.78 -0.69 0.01 0.15 -0.95 -0.88 -1.12 -0.78 -0.84 SCUT9827 STM4284 || yjcO || putative TPR repeat protein || 365256 0.36 -0.03 -0.33 0.45 0.71 -0.84 -0.85 -0.16 -0.1 -1.17 -0.94 -1.1 -1.02 -0.85 SCUT7093 STM4291 || basS || sensory kinase in two-component regulatory system with BasR || 366283 0.24 -0.07 -0.17 0.14 -0.46 -0.54 -0.18 -0.03 -0.7 -0.15 -1.04 -0.67 -1.08 SCUT7125 STM4332 || yjeJ || putative inner membrane protein || 363022 0.05 0.01 -0.06 -0.12 -0.07 -0.69 -0.44 -0.29 -0.66 -0.51 -0.78 -0.86 -0.87 -0.69 SCUT7194 STM4408 || msrA || peptide methionine sulfoxide reductase || 364205 0.22 -0.33 0.12 1.37 1.27 -0.1 -0.48 -0.55 -1.68 -1.62 -2.06 -1.89 -1.74 SCUT9799 STM4408 || msrA || peptide methionine sulfoxide reductase || 366105 -0.06 0.06 0.98 1.39 -0.14 -0.26 -0.84 -0.58 -1.52 -2.08 -1.46 -1.66 SCUT7261 STM4480 || yjgQ || putative permease || 365359 0 -0.18 0.07 -0.3 -0.34 -0.46 -0.39 -0.25 -0.32 -0.57 SCUT7268 STM4490 || STM4490 || putative Mrr restriction endonuclease || 368510 0.04 0.16 -0.2 0.38 0.22 -0.79 -0.49 -0.21 0.06 -0.88 -0.77 -1.64 -1.44 -1.07 SCUT10196 STM4490 || STM4490 || putative Mrr restriction endonuclease || 369363 0.25 0.08 -0.33 0.34 0.23 -0.64 -0.25 -0.37 -0.72 -0.56 -1.39 -1.16 -1.4 SCUT7271 STM4493 || STM4493 || putative cytoplasmic protein || 367553 0 0.21 0.2 -0.31 -0.23 -0.55 -0.46 -0.17 SCUT7277 STM4499 || yeeN || putative cytoplasmic protein || 363938 -0.01 0.12 -0.12 0.39 0.76 -0.82 -1.08 -1.17 -1.14 -0.6 0.1 -0.7 -0.72 -0.15 SCUT10304 || || || 362686 0.18 0.15 -0.34 0.41 0.23 1.97 1.66 -0.69 -0.37 -0.3 0.05 -1.16 -0.62 -1.94 SCUT10377 || || || 368825 0.11 -0.11 0.28 0.56 0.34 -0.9 -0.65 -1.1 -0.38 -1.84 -1.25 -2.27 SCUT9690 PSLT026 || PSLT026 || putative periplasmic protein || 365625 0.37 0.39 -0.77 0.76 0.9 1.06 0.89 -0.33 -0.08 -0.04 0.2 -1.85 -1.06 -1.64 SCUT6677 PSLT071 || PSLT071 || pseudogene; two frameshifts || 362257 -0.2 0.2 0.43 0.46 0.73 -0.82 -0.31 -1.04 -0.65 -1.42 -1.47 SCUT6676 PSLT071 || PSLT071 || pseudogene; two frameshifts || 362860 0.31 0.21 -0.53 0.3 0.5 1.72 1.23 -0.86 -0.73 -0.39 -0.01 -1.6 -1.2 -2.23 SCUT6675 PSLT071 || PSLT071 || pseudogene; two frameshifts || 363463 0.35 0.21 -0.57 0.28 0.8 1.72 2.01 -0.8 -0.88 0.01 0.34 -1.48 -0.85 -1.92 SCUT6683 PSLT079 || traE || conjugative transfer: assembly || 366873 0.38 0.12 -0.5 0.38 0.43 0.14 -0.17 -0.96 -1.05 -0.62 -1.27 -1.56 -1.44 SCUT6773 STM0311 || yafJ || putative glutamine amidotransferase || 363213 0.05 0.04 -0.09 -0.18 0.06 0.04 0.03 -0.62 -0.41 -0.56 -0.25 -0.77 -0.49 -0.39 SCUT2195 "STM0408 || secF || preprotein translocase, IISP family, membrane subunit || 362512" 0.29 -0.02 -0.27 -0.01 0.14 0.03 -0.35 -0.4 -0.54 -0.74 -0.39 -1.28 -0.81 -0.6 SCUT5989 STM0768 || dcoB || Oxalacetate decarboxylase: beta chain || 363045 0.04 -0.03 0 0.14 -0.08 -0.01 -0.2 -0.39 -0.34 -0.37 -0.49 -0.05 -0.34 SCUT5991 STM0926 || STM0926 || Fels-1 prophage; putative minor tail protein || 362688 0.03 0.13 -0.15 0.12 0.23 0.17 -0.24 -0.51 -0.31 -1.04 -0.37 -0.83 -0.17 -0.37 SCUT6023 STM0946 || tnpA_1 || IS200 transposase || 362537 0.12 -0.2 0.09 -0.02 -0.16 -0.28 -0.41 -1.01 -1.12 -1.29 -0.98 -1.27 -0.62 -1.59 SCUT9547 STM0946 || tnpA_1 || IS200 transposase || 366668 0.04 -0.04 -0.01 -0.05 -0.19 -0.19 -0.78 -1.56 -1.33 -1.63 -1.23 -1.41 -0.98 -1.1 SCUT2881 STM1002 || STM1002 || putatiave diaminopropionate ammonia lyase || 367198 0.05 0.13 -0.19 -0.32 0.09 -0.38 -0.38 -0.47 -0.99 -0.67 -0.7 -0.29 -0.97 SCUT6509 STM1243 || STM1243 || homology with cold shock proteins || 369296 0 -0.35 -0.09 -0.17 -0.8 -0.68 -0.44 -0.22 -0.65 -0.73 -0.49 SCUT9233 STM1402 || sseE || Secretion system effector || 363931 0.13 0.1 -0.24 0.02 0.16 0.57 0.95 0.08 -0.44 0.08 -1.01 -0.32 -0.85 SCUT9139 STM1417 || ssaP || Secretion system apparatus || 369138 -0.06 0.06 -0.22 0.06 -0.28 -0.28 -0.82 -0.54 -0.67 -0.28 -0.45 SCUT7620 STM1728 || yciG || putative cytoplasmic protein || 366081 0 -0.04 0.04 -0.42 -0.34 0.35 0.25 -0.81 -0.74 -1.1 -0.69 -0.68 -0.81 -0.9 SCUT7969 STM2233 || STM2233 || putative cytoplasmic protein || 364996 0.03 -0.03 0.01 -0.23 -0.52 -0.52 -0.9 -0.56 -0.53 SCUT9740 STM2233 || STM2233 || putative cytoplasmic protein || 367951 0.16 -0.16 -0.31 -0.08 -0.74 -0.66 -1.17 -0.68 -0.84 -0.63 -0.95 SCUT8603 STM2423 || yfeN || putative outer membrane protein || 363057 0.11 -0.11 -0.13 -0.16 -0.07 -0.47 -0.4 -0.36 -0.36 -0.46 SCUT6020 STM2471 || tnpA_3 || transposase for IS200 || 364342 -0.19 0.03 0.16 0.26 0.58 0.05 -0.18 -1.3 -1.16 -1.02 -1.26 -0.98 -0.52 -0.85 SCUT9549 STM2471 || tnpA_3 || transposase for IS200 || 365464 0.25 -0.34 0.08 -0.33 -0.35 -0.18 -0.7 -1.29 -1.11 -1.57 -1.07 -1.3 -0.84 -1.19 SCUT9548 STM2471 || tnpA_3 || transposase for IS200 || 366068 -0.05 0.09 -0.03 0.12 0.43 -0.04 -0.31 -1.42 -1.23 -1.3 -1.2 -1.44 -0.89 -1.19 SCUT5996 STM2471 || tnpA_3 || transposase for IS200 || 367052 0.04 -0.04 -0.01 0 0.38 -0.34 -0.51 -1.09 -1.15 -1.38 -1.07 -1.41 -0.81 -1.44 SCUT8105 STM2520 || yfgL || putative serine/threonine protein kinase || 369182 0.17 -0.01 -0.16 0.1 0.07 0.09 -0.3 -0.37 -0.59 -0.38 -0.5 -0.24 -0.36 SCUT2810 STM2753 || STM2753 || putative dehydrogenase || 367216 0 0.09 -0.1 0.22 -0.03 0.31 0.12 -0.52 -0.13 -0.47 0.07 -0.71 -0.3 -0.46 SCUT9261 STM2765 || STM2765 || putative transposase || 364321 0.04 -0.09 0.05 -0.03 0.46 -0.1 -0.77 -0.7 -0.47 -0.31 -0.75 -0.16 -0.4 SCUT1649 STM2765 || STM2765 || putative transposase || 368130 0.17 0.08 -0.26 0.54 0.57 0.07 -0.18 -0.48 -0.56 -0.44 -0.18 -0.61 -0.35 -0.02 SCUT1900 STM3332 || yhcG || putative cytoplasmic protein || 367769 -0.04 -0.14 0.17 1.53 1.37 0.57 0.33 -0.22 -0.21 -0.64 -0.19 -0.41 -0.6 -0.6 SCUT8670 STM3478 || bigA || putative surface-exposed virulence protein || 365456 0.14 -0.14 -0.22 -0.13 -0.17 -0.2 -0.52 -0.79 -0.41 -0.57 -0.52 -0.46 SCUT2287 STM3601 || STM3601 || putative phosphosugar isomerase || 365012 0.22 -0.04 -0.17 0.23 0.1 0.3 0 -0.43 -0.52 -0.63 -0.15 -0.81 -0.58 -0.27 SCUT1811 STM3605 || STM3605 || putative phage endolysin || 363447 0.18 -0.03 -0.15 1.28 0.92 1.03 0.92 -0.21 -0.4 -0.31 -0.09 -0.4 -0.32 0.39 SCUT8784 STM3690 || STM3690 || putative inner membrane lipoprotein || 363766 -0.09 -0.08 0.18 0.03 0 0.77 0.61 -2.12 -1.54 -1.3 -0.73 -1.02 -0.82 -1.45 SCUT8793 STM3707 || yibD || putative glycosyltransferase || 366551 -0.02 0.04 -0.02 1.29 1.69 0.13 -0.51 -0.84 -0.73 -1.14 -1.12 SCUT8800 STM3716 || rfaY || lipopolysaccharide core biosynthesis; modification of heptose region of the core || 369291 -0.03 -0.01 0.04 -0.31 -0.05 0.63 0.63 -0.69 -0.5 -0.47 -0.21 -0.52 -0.38 -0.2 SCUT1788 STM3754 || STM3754 || putative cytoplasmic protein || 368640 0.22 -0.17 -0.05 0.01 0.17 -0.19 -0.28 -0.44 -0.54 -0.66 -0.36 -0.78 -0.79 -0.47 SCUT8540 STM3953 || yigF || putative inner membrane protein || 367726 0.2 -0.21 0.01 -0.51 0.05 1.35 -0.82 -0.67 -1.16 -0.86 -1.15 -0.89 -0.71 SCUT8541 STM3954 || yigG || putative inner membrane protein || 367115 0.05 -0.05 -0.65 -0.11 1.77 1.46 -1.58 -1.46 -1.85 -1.7 -1.43 -1.37 -1.44 SCUT9134 STM3980 || STM3980 || putative outer membrane protein || 364787 -0.09 0.16 -0.06 -0.37 0.53 0.51 0.2 -1.11 -1.07 -0.93 -0.72 -1.13 -0.73 -0.47 SCUT6163 STM4053 || STM4053 || putative C4-dicarboxylate transport system || 362451 0.26 -0.26 -0.23 -0.27 -0.22 -0.4 -0.85 -0.54 -0.69 -0.46 -0.94 -0.51 -0.69 SCUT9242 STM4155 || STM4155 || putative inner membrane protein || 366717 0.33 -0.42 0.08 0.51 0.44 0.63 0.41 -1.16 -1.11 -1.11 -1.25 -1.41 -1.32 SCUT8963 STM4156 || STM4156 || putative cytoplasmic protein || 364423 0 -0.14 0.16 -0.38 -0.65 -1.07 -1.11 -0.47 -0.39 -0.18 -0.39 SCUT6982 STM4169 || yjaG || putative cytoplasmic protein || 363069 -0.14 -0.21 0.36 -0.71 -0.42 1.07 0.79 0.06 0.1 -0.66 -0.83 -1.02 -0.95 -0.64 SCUT9755 STM4199 || STM4199 || putative cytoplasmic protein || 367126 -0.07 0.03 0.05 -0.03 -0.04 -0.19 -0.1 -0.38 -0.49 -0.35 -0.21 -0.46 -0.37 -0.57 SCUT9916 STM4204 || STM4204 || putative inner membrane protein || 362198 0.16 0.05 -0.21 -0.17 0.18 -0.04 0.02 -0.61 -0.73 -2.18 -1.89 -2.06 -1.66 -2.03 SCUT7010 STM4204 || STM4204 || putative inner membrane protein || 365324 0.03 0.05 -0.09 -0.11 0.02 0.17 0.23 -0.51 -0.11 -1.73 -1.35 -1.23 -1.4 -0.87 SCUT7025 STM4218 || STM4218 || putative inner membrane protein || 364491 0 0.33 0.6 -0.02 -0.36 -0.37 -0.35 -0.62 SCUT9454 STM4252 || STM4252 || putative inner membrane protein || 364769 0.12 -0.12 -0.03 0.01 -0.3 -0.37 -0.52 -0.5 -0.22 -0.43 -0.38 -0.36 SCUT10146 STM4259 || STM4259 || putative ABC exporter outer membrane component homolog || 365800 -0.01 -0.12 0.12 -0.38 0.07 0.32 -0.15 -1.2 -1.06 -1 -0.58 -0.91 -0.73 -0.83 SCUT7062 STM4259 || STM4259 || putative ABC exporter outer membrane component homolog || 367697 -0.12 0.05 0.06 -0.34 -0.03 0.41 0.19 -0.76 -0.94 -0.87 -0.31 -0.71 -0.86 -0.93 SCUT9099 STM4259 || STM4259 || putative ABC exporter outer membrane component homolog || 368994 0.04 -0.42 0.37 0.09 0.14 -1.26 -1.02 -0.63 -0.67 -0.98 -0.69 SCUT8979 "STM4262 || STM4262 || putative ABC-type bacteriocin/lantibiotic exporter, contain an N-terminal double-glycine peptidase domain || 362987" 0.05 -0.11 0.06 0.36 1.08 0.94 1.22 -0.97 -0.84 -0.14 -0.14 -0.2 -0.22 0.16 SCUT7064 "STM4262 || STM4262 || putative ABC-type bacteriocin/lantibiotic exporter, contain an N-terminal double-glycine peptidase domain || 366476" 0.11 0.11 -0.23 0.6 0.71 0.49 0.39 -0.75 -0.45 -0.38 -0.17 -0.49 -0.2 -0.44 SCUT7321 STM4547 || yjjQ || putative transcriptional regulator (LuxR/UhpA family) || 362506 -0.1 0.1 0.32 0.15 -0.1 0 -0.89 -0.92 -0.69 -0.82 -1.16 -0.87 -0.59 SCUT9733 || || || 363964 0.23 -0.23 -0.27 -0.01 -0.2 -0.16 -0.28 -0.6 -0.2 -0.94 -0.44 -0.55 SCUT9142 PSLT019 || pefB || plasmid-encoded fimbriae;regulation || 368181 0.02 -0.02 -0.42 0.01 -0.87 0.18 0.5 -1.31 -0.79 -1.77 SCUT9127 PSLT038 || spvC || Salmonella plasmid virulence: hydrophilic protein || 368157 0.59 0.03 -0.63 -0.07 0.08 -0.48 -1.02 -0.38 -0.28 -1.02 -0.81 -1.22 -1.29 -1.97 SCUT6646 PSLT040 || spvA || Salmonella plasmid virulence: outer membrane protein || 363665 0.31 0.26 -0.58 0.38 0.35 1.64 1.46 0.75 1.11 -0.22 -0.16 -0.79 -0.13 -1.15 SCUT9210 PSLT040 || spvA || Salmonella plasmid virulence: outer membrane protein || 368712 0.34 0.3 -0.63 0.64 0.3 1.67 1.86 1.43 1.69 -0.05 0.24 -1.17 -0.26 -1.42 SCUT6700 PSLT101 || traG || conjugative transfer: assembly abd aggregate stability || 364433 0.46 0.31 -0.77 0.66 0.62 0.67 0.26 -0.06 0.29 -0.93 -0.35 -1.59 -1.35 -1.76 SCUT9427 STM0208 || dgt || deoxyguanosine triphosphate triphosphohydrolase || 363760 -0.01 0.13 -0.12 -0.62 -0.2 -0.31 -0.26 0.23 0.32 -1.02 -0.86 -1.65 -1.18 -1.45 SCUT7478 STM0208 || dgt || deoxyguanosine triphosphate triphosphohydrolase || 367764 0.1 -0.03 -0.07 -0.47 -0.39 -0.59 -0.34 -0.09 0.56 -1.63 -1.22 -2.19 -1.59 -1.35 SCUT6760 STM0290 || STM0290 || putative cytoplasmic protein || 362820 0.1 0 -0.1 -0.06 -0.48 -0.39 -0.54 0.26 0.42 -0.83 -0.6 -1.22 -1.06 -1.53 SCUT6764 STM0300 || safB || putative fimbriae assembly chaparone || 367785 -0.12 0.11 0.01 0 -0.27 0.46 0.49 0.48 0.7 -0.55 -1.11 -0.75 -0.5 -0.47 SCUT6775 "STM0313 || dinP || DNA polymerase IV, devoid of proofreading, damage-inducible protein P || 369357" -0.02 -0.07 0.1 -0.77 -0.77 -0.85 -0.63 0.15 0.69 -1.98 -1.77 -2 -1.73 -2.11 SCUT6788 STM0327 || STM0327 || putative cytoplasmic protein || 362380 0.13 -0.49 0.35 -0.08 -0.02 -0.18 -1.02 0.29 0.32 -1.44 -0.79 -0.31 -0.93 -0.96 SCUT6894 STM0528 || allD || ureidoglycolate dehydrogenase || 365525 0.11 -0.06 -0.05 0.02 0.03 0.08 -0.12 0.09 0.49 -0.59 -0.25 -1.15 -0.69 -0.71 SCUT2517 STM0544 || fimI || fimbrial protein internal segment || 367404 0.04 -0.04 0.01 -0.24 -0.21 -0.06 0.02 0.01 0.24 -1.33 -0.19 -0.67 -0.5 -0.73 SCUT2944 STM0630 || crcB || high-copy crc-csp restores normal chromosome condensation in presence of camphor or mukB mutations || 362547 -0.01 0.01 -0.01 -0.05 -0.06 0.01 0.15 -0.47 -0.3 -0.51 -0.21 -0.27 SCUT8881 STM0741 || cydB || cytochrome d terminal oxidase polypeptide subunit II || 364105 0.09 -0.04 -0.05 -0.04 -0.09 -0.09 -0.25 0.18 -0.09 -0.52 -0.12 -0.88 -0.51 -0.4 SCUT6417 STM1074 || yccF || putative inner membrane protein || 366805 0.14 -0.08 -0.05 -0.26 0.25 -0.35 -0.61 -1.46 -0.66 -1.08 SCUT9228 "STM1144 || csgA || curlin major subunit, coiled surface structures; cryptic || 366092" 0.04 -0.04 0.46 0.11 0.09 0.45 -0.41 -0.34 -0.39 -0.19 -0.13 SCUT8928 STM1246 || pagC || PhoP regulated: reduced macrophage survival || 367392 -0.02 -0.07 0.08 -0.56 -0.17 0.35 0.14 -0.15 -0.09 -1.35 -0.72 -1.42 -1.25 -1.37 SCUT9694 STM1271 || yeaR || putative cytoplasmic protein || 363219 0.18 0.01 -0.19 -0.67 -0.72 -0.37 -0.19 -0.21 -1.12 -0.91 -1.08 -0.69 -0.93 SCUT2266 STM1271 || yeaR || putative cytoplasmic protein || 368605 0.13 -0.14 0.02 -0.61 -0.58 -0.08 -0.32 0.14 0.45 -0.91 -0.56 -0.74 -0.56 -0.89 SCUT10028 STM1589 || yncB || putative NADP-dependent oxidoreductase || 369055 0.22 -0.08 -0.15 -0.24 -0.07 -0.8 -0.07 -0.19 -0.75 -0.58 -0.85 -0.88 -1.04 SCUT3006 STM1855 || sopE2 || TypeIII-secreted protein effector: invasion-associated protein || 368944 0.02 -0.02 -0.29 0.06 -0.39 -0.55 -0.3 -0.31 -0.76 -0.38 -1.13 SCUT8601 "STM2421 || xapB || MFS superfamily, xanthosine permease || 364256" 0.09 -0.32 0.22 0.53 0.52 -0.12 -0.17 -0.1 0.04 -0.36 -0.33 -0.56 -0.59 -0.78 SCUT8109 STM2531 || pbpC || transglycosylase of penicillin-binding protein 1c || 366777 0 -0.08 0.07 0.33 0.23 0.01 -0.41 -0.21 -0.06 -0.4 -0.23 -0.38 -0.39 -0.44 SCUT2756 STM3124 || STM3124 || putative response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain || 366451 0.15 -0.19 0.04 0.2 0.34 -0.08 -0.15 0.36 0.4 -0.94 -0.62 -0.59 -0.35 -0.28 SCUT8378 STM3128 || STM3128 || putative oxidoreductase || 365024 0.02 0.01 -0.04 -0.13 -0.13 -0.29 -0.2 -0.34 -0.6 -0.52 -0.58 -0.51 SCUT2132 STM3132 || STM3132 || putative xylanase/chitin deacetylase || 365933 0.18 0.03 -0.2 -0.15 0.04 -0.26 -0.43 0.08 0.17 -0.92 -0.5 -0.84 -0.82 -0.96 SCUT1822 STM3155 || STM3155 || putative cytoplasmic protein || 365035 0.24 0 -0.23 0.05 -0.27 0.29 -0.03 0.02 -0.27 -0.97 -1.01 -0.44 -0.43 -0.31 SCUT2636 STM3247 || garK || glycerate kinase || 363538 0.14 0.06 -0.19 0.14 0.22 -0.18 -0.15 -0.23 -0.19 -0.28 -0.21 -1.58 -1 -0.37 SCUT8759 STM3654 || STM3654 || pseudogene; in-frame stop following codon 23 || 368913 0 -0.1 0.18 -0.14 -0.12 -0.78 -0.43 -1.04 SCUT8770 "STM3670 || STM3670 || putative chemotaxis protein, resembles cheA || 363989" 0.02 -0.08 0.06 0.39 0.44 0.8 0.12 0.29 0.53 -1.15 -0.57 -0.85 -0.86 -0.38 SCUT8823 STM3759 || marT || putative transcriptional regulatory protein || 364504 0.02 -0.19 0.17 -0.02 -0.16 0.11 -0.34 1.7 2.14 -1.12 -0.73 -0.8 -0.59 -0.56 SCUT9113 STM3759 || marT || putative transcriptional regulatory protein || 368381 0.18 -0.01 -0.16 -0.54 -0.13 -0.11 -0.09 0.86 1.16 -0.68 -0.76 -1.17 -0.86 -0.62 SCUT8841 STM3784 || STM3784 || putative phosphotransferase system mannitol/fructose-specific IIA domain || 362710 0.03 -0.05 0.01 0.5 0.38 0.27 -0.07 -0.03 0.35 -0.15 -0.37 -0.52 -0.31 -0.37 SCUT6177 "STM4078 || yneB || putative fructose-1,6-bisphosphate aldolase || 362219" -0.18 -0.14 0.32 -0.57 -0.44 1.65 1.25 0.37 0.43 -0.76 -0.71 -0.88 -0.64 -0.98 SCUT7111 STM4310 || STM4310 || putative inner membrane protein || 363258 0.1 -0.04 -0.05 0.81 0.52 -0.13 -0.85 -0.08 0.43 -1.4 -0.71 -1.05 -0.83 0.16 SCUT10259 STM4310 || STM4310 || putative inner membrane protein || 364720 -0.06 0.09 -0.02 0.92 1.21 -0.16 -0.17 0.19 0.48 -0.95 -0.59 -1.13 -0.58 0.27