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Whole Genome Deep Sequencing of HIV-1 Reveals the Impact of Early Minor Variants Upon Immune Recognition During Acute Infection

Figure 2

Comparison of sequence variant quantification by 454 deep sequencing and by PCR cloning/sequencing.

Orthogonal regression of variant frequency estimates obtained by 454 and clonal sequence data across the highly variable 1544 nucleotide region spanning Vif to Tat in subject 9213 (slope = 1.01; 95% CI, 0.73 to 1.40).

Figure 2

doi: https://doi.org/10.1371/journal.ppat.1002529.g002