About the Authors

Manuela Carrasquilla

Contributed equally to this work with: Manuela Carrasquilla, Angela M. Early

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

carrasquilla@mpiib-berlin.mpg.de (MC); early@broadinstitute.org (AME); neafsey@broadinstitute.org (DEN); vcorredore@unal.edu.co (VC)

Affiliations Department of Immunology and Infectious Diseases, Harvard T.H.Chan School of Public Health, Boston, Massachusetts, United States of America, Infectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

Angela M. Early

Contributed equally to this work with: Manuela Carrasquilla, Angela M. Early

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

carrasquilla@mpiib-berlin.mpg.de (MC); early@broadinstitute.org (AME); neafsey@broadinstitute.org (DEN); vcorredore@unal.edu.co (VC)

Affiliations Department of Immunology and Infectious Diseases, Harvard T.H.Chan School of Public Health, Boston, Massachusetts, United States of America, Infectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

Aimee R. Taylor

Roles Conceptualization, Formal analysis, Investigation, Methodology, Writing – review & editing

Affiliations Infectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America, Center for Communicable Disease Dynamics, Harvard T.H.Chan School of Public Health, Boston, Massachusetts, United States of America

Angélica Knudson Ospina

Roles Conceptualization, Investigation, Writing – review & editing

Affiliation Departamento de Microbiología, Facultad de Medicina, Universidad Nacional de Colombia, Bogotá, Colombia

Diego F. Echeverry

Roles Data curation, Writing – review & editing

Affiliations Departamento de Microbiología, Facultad de Salud, Universidad del Valle, Cali, Colombia, Centro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia

Timothy J. C. Anderson

Roles Funding acquisition, Resources, Supervision, Writing – review & editing

Affiliation Program in Disease Intervention and Prevention, Texas Biomedical Research Institution, San Antonio, Texas, United States of America

Elvira Mancilla

Roles Resources, Writing – review & editing

Affiliation Secretaría Departamental de Salud del Cauca, Popayán, Colombia

Samanda Aponte

Roles Investigation, Project administration, Resources, Writing – review & editing

Affiliation Departamento de Salud Pública, Facultad de Medicina, Universidad Nacional de Colombia, Bogotá, Colombia

Pablo Cárdenas

Roles Investigation, Writing – review & editing

Affiliation Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America

Caroline O. Buckee

Roles Funding acquisition, Supervision, Writing – review & editing

Affiliation Center for Communicable Disease Dynamics, Harvard T.H.Chan School of Public Health, Boston, Massachusetts, United States of America

Julian C. Rayner

Roles Conceptualization, Funding acquisition, Resources, Writing – review & editing

Affiliations Wellcome Sanger Institute, Hinxton, Cambridge, United Kingdom, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom

Fabián E. Sáenz

Roles Conceptualization, Funding acquisition, Resources, Writing – review & editing

Affiliation Centro de Investigación para la Salud en América Latina, Facultad de Ciencias Exactas y Naturales, Pontificia Universidad Católica del Ecuador, Quito, Ecuador

Daniel E. Neafsey

Roles Conceptualization, Funding acquisition, Project administration, Resources, Supervision, Writing – review & editing

carrasquilla@mpiib-berlin.mpg.de (MC); early@broadinstitute.org (AME); neafsey@broadinstitute.org (DEN); vcorredore@unal.edu.co (VC)

Affiliations Department of Immunology and Infectious Diseases, Harvard T.H.Chan School of Public Health, Boston, Massachusetts, United States of America, Infectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

Vladimir Corredor

Roles Conceptualization, Data curation, Funding acquisition, Project administration, Resources, Supervision, Writing – review & editing

carrasquilla@mpiib-berlin.mpg.de (MC); early@broadinstitute.org (AME); neafsey@broadinstitute.org (DEN); vcorredore@unal.edu.co (VC)

Affiliation Departamento de Salud Pública, Facultad de Medicina, Universidad Nacional de Colombia, Bogotá, Colombia

Competing Interests

The authors have declared that no competing interests exist.