About the Authors
- Pejman Mohammadi
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Affiliations Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland, SIB Swiss Institute of Bioinformatics, Basel and Lausanne, Switzerland
- Sébastien Desfarges
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Affiliation Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland
- István Bartha
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Affiliation Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland
- Beda Joos
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Affiliation Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland
- Nadine Zangger
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Affiliations SIB Swiss Institute of Bioinformatics, Basel and Lausanne, Switzerland, Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland
- Miguel Muñoz
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Affiliation Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland
- Huldrych F. Günthard
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Affiliation Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland
- Niko Beerenwinkel
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* E-mail: niko.beerenwinkel@bsse.ethz.ch (NB); amalio.telenti@chuv.ch (AT); angela.ciuffi@chuv.ch (AC)
Affiliations Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland, SIB Swiss Institute of Bioinformatics, Basel and Lausanne, Switzerland
- Amalio Telenti
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* E-mail: niko.beerenwinkel@bsse.ethz.ch (NB); amalio.telenti@chuv.ch (AT); angela.ciuffi@chuv.ch (AC)
Affiliations Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland, University of Lausanne, Lausanne, Switzerland
- Angela Ciuffi
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* E-mail: niko.beerenwinkel@bsse.ethz.ch (NB); amalio.telenti@chuv.ch (AT); angela.ciuffi@chuv.ch (AC)
Affiliations Institute of Microbiology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland, University of Lausanne, Lausanne, Switzerland
Competing Interests
The authors have declared that no competing interests exist.
Author Contributions
Conceived and designed the experiments: AC PM NB AT. Performed the experiments: SD BJ MM HFG AC. Analyzed the data: PM NZ IB AC. Contributed reagents/materials/analysis tools: PM SD BJ NZ IB MM HFG NB AT AC. Wrote the paper: PM NB AT AC. Developed the web service: IB.