Internal Transcribed Spacer 1 Secondary Structure Analysis Reveals a Common Core throughout the Anaerobic Fungi (Neocallimastigomycota)

Open Access

Peer-reviewed

Research Article

Christian Koetschan,

Affiliation AgResearch Ltd., Grasslands Research Centre, Palmerston North, New Zealand
⨯
Sandra Kittelmann ,

* E-mail: sandra.kittelmann@agresearch.co.nz

Affiliation AgResearch Ltd., Grasslands Research Centre, Palmerston North, New Zealand
⨯
Jingli Lu,

Affiliation AgResearch Ltd., Grasslands Research Centre, Palmerston North, New Zealand
⨯
Djamila Al-Halbouni,

Affiliation ViaLactia Biosciences Ltd., Newmarket, Auckland, New Zealand
⨯
Graeme N. Jarvis,

Affiliation New Zealand Trade and Enterprise, Wellington, New Zealand
⨯
Tobias Müller,

Affiliation University of Würzburg, Department of Bioinformatics, Biocenter, Würzburg, Germany
⨯
Matthias Wolf,

Affiliation University of Würzburg, Department of Bioinformatics, Biocenter, Würzburg, Germany
⨯
Peter H. Janssen

Affiliation AgResearch Ltd., Grasslands Research Centre, Palmerston North, New Zealand
⨯

Fungal structure
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Phylogenetic analysis
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Sequence motif analysis
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Taxonomy
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Sequence alignment
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Hidden Markov models
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Phylogenetics
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Fungi
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