Peer Review History

Original SubmissionMarch 2, 2022
Decision Letter - Isabelle Chemin, Editor

PONE-D-22-05384Adherence barriers and interventions to improve ART adherence in Sub-Saharan African countries: a systematic review protocolPLOS ONE

Dear Dr. Yaya,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

In particular, the protocol proposes two reviews - one on barriers to adherence; and another on interventions to address adherence. Both these reviews have been undertaken by previous researchers; but none of these reviews are referenced in the manuscript. As such a convincing rationale for the added benefit of the proposed review to existing literature is not provided.

Please submit your revised manuscript by  8 weeks. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.
  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.
  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Isabelle Chemin, PhD

Academic Editor

PLOS ONE

Journal Requirements:

1. When submitting your revision, we need you to address these additional requirements.

Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions?

The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field.

Reviewer #1: Yes

Reviewer #2: No

**********

2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses?

The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory.

Reviewer #1: Yes

Reviewer #2: No

**********

3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable?

Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible.

Reviewer #1: Yes

Reviewer #2: No

**********

4. Have the authors described where all data underlying the findings will be made available when the study is complete?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception, at the time of publication. The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: No

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics.

You may also provide optional suggestions and comments to authors that they might find helpful in planning their study.

(Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The protocol is generally well drafted and will be valuable input to policy makers working on the area of HIV/AIDS and/or ART in the sub-saharan African countries. Providing concrete and cumulative evidence on barriers to and strategies for ART adherence will also be highly recommended to maximize treatment outcome in the region.

Having said this, I do have few concerns which require due attention while conducting this systematic review and meta-analysis

• Grammatical, syntax and technical problems

Abstract

o E.g. Background: Despite efforts to prevent new infections and deaths through antiretroviral therapy (ART)…… Can we prevent new infections with ART? Please rephrase the statement.

o Method: The review will include experimental and quasi-experimental studies such as…….. Please make it concise

o Why do you focus on articles published after 2010?

o The role of case studies and case-control studies for this protocol (interventional approach) should be clarified. It will be better if you include studies with interventional or observational nature (cohort or cross-sectional) ……

o Discussion: this review will provide information to policy makers….. better ways of not only retaining patients on treatment but also having them adhere to their treatment……

Method:

Search strategy requires refinement

• The keywords should be concise and explicit. It is not recommended to use phrases in searching unless it is a medical term or compulsory otherwise.

• Use Medical Subject Headings (MesH) during searching in major databases such as MEDLINE, PubMed. E.g. instead of using sub-saharan African Countries, apply “African, south of the Sahara” to address all countries in the region at once with MeSH.

• You can use truncation (*) to expand the search results as well. E.g. instead of using adulthood, apply adult*

• Make sure that you have prepared a ‘PICO’ tree for effectively addressing all studies conducted in the region.

• Google scholar and CDC are not databases, they are either search engines or directories…..

Discussion:

• The discussion is actually shallow. You can explain the rationale of conducting this protocol supported with citations.

• This protocol is an original research protocol??????? It is a systematic review protocol

Reviewer #2: The protocol proposes two reviews - one on barriers to adherence; and another on interventions to address adherence. Both these reviews have been undertaken by previous researchers; but none of these reviews are referenced in the manuscript. As such a convincing rationale for the added benefit of the proposed review to existing literature is not provided.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Mekonnen Sisay

Reviewer #2: Yes: Brian van Wyk

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

Attachments
Attachment
Submitted filename: Peer-review to PLoS ONE.docx
Revision 1

Review Comments to the Author

Reviewer #1: The protocol is generally well drafted and will be valuable input to policy makers working on the area of HIV/AIDS and/or ART in the sub-Saharan African countries. Providing concrete and cumulative evidence on barriers to and strategies for ART adherence will also be highly recommended to maximize treatment outcome in the region.

Having said this, I do have few concerns which require due attention while conducting this systematic review and meta-analysis

• Grammatical, syntax and technical problems

Abstract

o E.g. Background: Despite efforts to prevent new infections and deaths through antiretroviral therapy (ART)…… Can we prevent new infections with ART? Please rephrase the statement.

RESPONSE: Thank you for this observation and recommendation. The statement has been rephrased and now reads “Despite efforts to reduce new infections and deaths with the use of antiretroviral therapy (ART)…”.

o Method: The review will include experimental and quasi-experimental studies such as…….. Please make it concise

RESPONSE: This has been revised and now reads “The review will include experimental and quasi experimental studies such as studies with controlled interventions that have assessed barriers to ART adherence and interventions improving ART adherence in SSA countries.

o Why do you focus on articles published after 2010?

RESPONSE: Thanks for this relevant question. We acknowledge that the core concept of systematic reviews is to provide an overview of a specific topic through a systematic approach - identifying all potential evidence on a given topic, selecting the evidence objectively, assessing the evidence critically, and synthesizing the evidence reasonably. As such, the priority in a systematic review is to identify and collect every possible information regarding a topic; that is, collecting as many studies as possible. Thus, it is always better not to limit the search strategy in a systematic review without a good reason. With regards to our study however, we would like to point out that there was initially considerable reluctance to provide ART in developing countries due to concerns that treatment was too expensive, too complex, and that drug resistance would be promoted by inadequate programmes. Because of these concerns, treatment programmes began to deliver ART at scale only in the 2000s. Widespread access to affordable antiretrovirals became feasible after the announcement by an Indian generics manufacturer in early 2001 that triple therapy could be manufactured for less than a dollar a day. Given this awareness, our objective in this study is not to look far back into old evidence but to look at recent evidence that speaks directly to the current or near current experiences of people still living with HIV in SSA - reason for the restriction on the time period.

o The role of case studies and case-control studies for this protocol (interventional approach) should be clarified. It will be better if you include studies with interventional or observational nature (cohort or cross-sectional) ……

RESPONSE: Thank you for this observation and recommendation. We accept your recommendation to include interventional or observational studies such as cohort or cross-sectional studies. This section has been revised on the manuscript with tracked changes.

o Discussion: this review will provide information to policy makers….. better ways of not only retaining patients on treatment but also having them adhere to their treatment……

RESPONSE: Thanks for this keen observation; the discussion section has been revised on the manuscript.

Method:

Search strategy requires refinement

• The keywords should be concise and explicit. It is not recommended to use phrases in searching unless it is a medical term or compulsory otherwise.

RESPONSE: Thanks for this recommendation; we reviewed our search strategy with the librarian, and this was taken into consideration. However, if any phrase has been used, it is to maximise the chance of not missing any article and where this is used, there was no other way than use the phrase.

• Use Medical Subject Headings (MesH) during searching in major databases such as MEDLINE, PubMed. E.g. instead of using sub-saharan African Countries, apply “African, south of the Sahara” to address all countries in the region at once with MeSH.

RESPONSE: Thank you for this suggestion. We reviewed our search strategy with the librarian, and this was taken into consideration; for example, line 34 of the attached search strategy reads “exp Africa South of the Sahara/”.

• You can use truncation (*) to expand the search results as well. E.g. instead of using adulthood, apply adult*

RESPONSE: Thanks for this suggestion; we consulted with the librarian and this was considered in our search strategy. Lines 35 to 53 of our search strategy has extensively used truncation to ensure we captured all articles e.g. cent* on line 35, adher* on line 43, complian* on line 46 etc.

• Make sure that you have prepared a ‘PICO’ tree for effectively addressing all studies conducted in the region.

RESPONSE: Thanks so much for this suggestion. We have described our inclusion criteria under methods following the ‘PICO’ criteria. When addressing all studies we will find through our searches of articles published in this region, we will adhere strictly to these criteria to ensure we capture all relevant studies for this review.

• Google scholar and CDC are not databases, they are either search engines or directories…..

RESPONSE: Thanks for this observation; revisions and correction on this section has been made on the manuscript.

Discussion:

• The discussion is actually shallow. You can explain the rationale of conducting this protocol supported with citations.

RESPONSE: Thanks for this suggestion; the discussion section has been revised following suggestions on the manuscript.

• This protocol is an original research protocol??????? It is a systematic review protocol

RESPONSE: Thank you for this observation; correction has been effected on the manuscript.

Reviewer #2: The protocol proposes two reviews - one on barriers to adherence; and another on interventions to address adherence. Both these reviews have been undertaken by previous researchers; but none of these reviews are referenced in the manuscript. As such a convincing rationale for the added benefit of the proposed review to existing literature is not provided.

RESPONSE: Thank you for this observation. We have now revised the discussion section of the manuscript and cited some previous reviews on this topic to support our rationale for this review. Tracked changes have been used to highlight all revisions done on the manuscript.

Attachments
Attachment
Submitted filename: Response to reviewers_052022.docx
Decision Letter - Isabelle Chemin, Editor

Adherence barriers and interventions to improve ART adherence in Sub-Saharan African countries: a systematic review protocol

PONE-D-22-05384R1

Dear Dr. Yaya,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Isabelle Chemin, PhD

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Formally Accepted
Acceptance Letter - Isabelle Chemin, Editor

PONE-D-22-05384R1

Adherence barriers and interventions to improve ART adherence in Sub-Saharan African countries: a systematic review protocol

Dear Dr. Yaya:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Mrs Isabelle Chemin

Academic Editor

PLOS ONE

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .