>CDV from Nyctereutes procyonoides (raccoon dog) in Japan, AB016776 ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------CTATCAAACTGCAACAAATAGTGGCGAGGAA TGACTCCAATTATCATAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA ACAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATGGATGTCTTGACACCTCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGTCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAGCAAAGAAACTGCCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATCCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGGCCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGATAGTATGATGATACACATCTCAATTGAACTGAGGGATGAAGACC GTAGTAAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTTAG--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 98-002 from dog in Japan, AB025270 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCGCAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTGGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATCCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTGGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 26D from dog in Japan, AB040766 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCGAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGTGTTAGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAACAAATTCGAGTCTTTGAGATAGGGTTCATCAAACCGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGGTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTAGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATACAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain HM-3, from dog in Japan AB040767 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATCATTGGAGATGAGATT GGGTTACCGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATACAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTCCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTAATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGGGGACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAGGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain HM-6, from dog in Japan AB040768 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTCCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATAACTGTGATACAATTGGGGTCAGAGAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGGGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTACATTGAAAGGGAGTTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAATAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTGA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ATTTTTGGACTCCGGATGGCTCACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGATCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 007LmT, from dog in Japan AB212729 ------------------------------------------------------------ -------------------------------CGTCTTACCCGATTGTCAGGCGTGAAATC GATAAATCCCGCCCAATTTTCTTCAAAAGCTATCAAACTGCAACAAATAGTGGAGAGGAC TGACTACGATTATCGTAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGACAGTATGGTGATACACATCTCAATTGGACTTAGGTACGATGACT ATGGTGAGGAATCCCTT------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 007Lm, from dog in Japan AB212730 ------------------------------------------------------------ ------------------------------------------------AGCAGTGAAATC GATATCTCCCGCCCAATTTTCTTCAAAAGCTATCAAACTGCAACAAATAGTGGAGAGGAC TGACTACGATTATCGTAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Ac96I, from dog in Japan AB212963 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAG TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGGGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAGGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAAACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCTTGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTTCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain P94S, from dog in Japan AB212964 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAG TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGGGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCTTGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTGATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTTCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain S124C, from dog in Japan AB212965 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGAATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAAATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATACTCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCATACTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGACGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAACTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC AAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTTCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATGGTTTATTATGTTTATGGACCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TAACATCACTAACCTTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 007Lm-20p,passaged 20 times Vero-DST cells AB250668 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATATGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain S124C-20p passaged 20 times in cells AB250729 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGAATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAAATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATACTCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCATACTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGACGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAACTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC AAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTTCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TAACATCACTAACCTTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Ac96I-20p passaged 20 times in cells AB250943 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAG TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGGGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCTTGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTTCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 011C, from dog in Japan AB252717 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCCTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGAATATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 009L, from dog in Japan AB252718 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAAAAGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGAATATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTGGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC CCTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain MS232, from dog in Japan AB286950 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTTTCC TACCAGGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTAAAAGAGGATATGGAAAAATCGGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGGGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGTCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGCGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGAGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTATTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGAGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTTCTACG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGGGTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCCCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain MAS5, from dog in Japan AB286951 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTAAAAGAGGATATGGAAAAATCGGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGGGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCGGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTAGTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGCGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGAGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTATTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGAGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTTCTACG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGGTTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 095Cr from dog in Japan AB286952 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAG TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGGGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGAATATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTACAGCAGTGGGTGAGCTGAGACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCTTGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACCCAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTTATGACCCAATCCG GACGATTTCTTATACATCCCCATTTAGACTAACTACCAGGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 03Cbr, from dog in Japan AB295480 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 50Cbl, from dog in Japan AB295481 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTAGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTAGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATACAAACATCCCAGATTCTGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 50Cbr, from dog in Japan AB295482 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTAGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTAGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATACAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 50Con, from dog in Japan AB295483 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTAGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTAGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATACAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 55L, from dog in Japan AB295485 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACAAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 66L, from dog in Japan AB295486 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 81ND, from dog in Japan AB295487 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAATTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTAATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCTAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGTTACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT ACCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCCGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATGAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Th270L, from dog in Thailand AB301066 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTACAAGGATAATGCAAGAGCTAATTCATCCAAGCTG CCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCTTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAGGTCATAGATGTCTTGACACCGCTATTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCAGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAATTTTCCCCCTATCAGTA TCTTTGTCCATGTCTTTGATCTCAAGAAAATCAGAGATAATCAGTATGATAACCGCTATC TCGGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAGAAGATTCGAGTCTTTGAGGTAGGGTTCATCAAACGGTGGCTAAATGACATG CCACTACTCCAGACAACCAATTATTTGGTCCTCCCAGAGAATTCCAAAGCTAAAGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATC-TTGGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACTCATCCGTAGA AAAAATGCATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAAGAACAAAAGAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGTAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCGTCGTATGGACGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCTTTTACAAACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC AATTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGGACAGTCCTTGGACTGAT AAACAAAGCAAGTAGAGGAGACCAATTCACTGTAGTCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAAATTATGGATAAGGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGACATATCCCGGGACGATCATGCTATTGTTTATTATGTTTATGACCCAATTCG GACGATTTCTTATACGTACCCATTCAGACTAACTACCAAGGGTAGGCCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTATGGTGTCACCAATTTTATCGATTCGATGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 82Con, from dog in Japan AB295488 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCGAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCTTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTATATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT GGCAAGATCAAGGTGAATTTTACTAATTACTGCGATGCAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTGTCAGCACTCTCTGGAGCCAGAGGTGACATATTC CCGCCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACCACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACATTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTAGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAATCAAGAGGAGCAAAAAAACTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATCCAAACATCCCATATTATGGATAAAGA TGTCCTTACTGAGTCTAATTTAGTGGTATTACCTACACAGAATTTTGGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACACACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCAATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain W729B, from dog in Japan AB605891 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCGAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCTTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTATATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCATTGGTGCATTAACCCACCT GGCAAGATCAAGGTGAATTTTACTAATTACTGCGATGCAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTGTCAGCACTCTCTGGAGCCAGAGGTGACATATTC CCGCCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATTCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACCACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTAGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATCCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCTAATTTAGTGGTATTACCTACACAGAATTTTGGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACACACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain A75/17, Switzerland AF112189 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------GCTCAGGTAGTCCAACAATGCTCTCC TACCAGGACAAGGTGAGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTA TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAGTTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCTATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTTCATGATTATATTGAAGGGGGGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCGGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCGATGGTTCACAAGATGGTATT-CTAGTGGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTTGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTATCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT CTCGTTTACATACGGTCCGGCTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCCCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAATCCACTGTAATCCCCCATGTGTTCACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GGCGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACAGCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGACAGTATGATGATACACATTTCAATTGGACTTAGGTATGATGACT GTGGTGAGAAATTCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTTAG--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV from China AF172411 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCTTTGCTTGCTATCACTGGAGTCCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATCGGAGATGAGATT GGGTCACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAAGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGGTCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAAGTGACATATTC CCACCACACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAATCTTTCCCTCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACTTCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGAGAGTTGATACTGGCTTCCTTGTGTGTAGAAGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGGTGGTATT-CTAGTAGTGACGCTAGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCAA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACCTCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACGTACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTCGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GTGGTGAGAAATCCCTTACTGACTATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV from lesser Panda in China AF178039 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAAGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTACTTGCTATCACTGGAGTCCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGAATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATCGGAGATGAGATT GGGTCACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTAACTAATTACTGCGATACAATTGGGCTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCAGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGATTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATCACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATTCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTTTACGTACCCATTTCAACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTTTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGATAGTATGATGATACATATCTCAATTGGACTTAGGTATGATGACT GTGGTGAGAAATCCCTTACCGACGATTGGATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Snyder Hill AF259552 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAGCAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTACAAGGACAATGCAAGAGCCAATCCATCCAAGCTG TCCCTAGTGACAGAAGAGCATGGGGGCAGGAGACCACCTTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCTTGCTTTCTATCACTGGAGTTCGATTTCACAAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAACCCGAACAGAGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGGTCAAGGTGAATTTTACTAATTACTGTGAGACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGTGATAATCAATATGCTGACCGCTATC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAAATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACTGTATTA TTATACCATGACAGCAGGGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGGATATT TGGGGCAACATCTATGGATCACATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAAAATACATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGTTTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCTAAAAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATACCCCATGTATTAACATTTGCACC CAGGGAATCAGGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATCGAGTCCAATTTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGATATATCACGAAATGATCATGCGATTGTTTATTATGTTTATGACCCATTCCG GACGATTTTTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGATAATTTGTGGTGTCACCAATTTTACAGATACGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGACAGTATAATGATACACATCTCAATTGGACTTAGGCATGATGACT ATGGTGAAAAATCCCTTACAGATGATTGAATT---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Yamaguchi/WT/100311, from tigers in Japan AB619774 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATGATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain, isolate B, Danmark AF478545 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain DK91 B, adapted in vitro, Danmark AF478546 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV isolate C, Danmark AF478547 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain DK91 C, adapted in vitro, Danmark AF478548 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain isolate D, Danmark AF478549 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGGTTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain DK91 D, adapted in vitro, Danmark AF478550 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGGTTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 5B HAY297453 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGGTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCTTCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGAAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATATGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 5VD H AY297454 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATGCAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAGTATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAAATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGGTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCTTCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTAACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACAATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain CDTaichung, Taiwan AY378091 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTCAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCC AGCAAGGTCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGACGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Onderstepoort D00758 ------------------------------------------------------------ ------------------------------------CGCTTGATTGCCAGGTTTGAAATC TATTGACCCCGCCCAATTTTCTTCAAAAGTCACTCAACTGCAATAAACATCGGAAAAGAC TGACCATGATTATCGTGATTAAAGAAAACTTAGGGCTCAGGTAGTCCAGCAATGCTCCCC TACCAAGACAAGGTGGGTGCCTTCTACAAGGATAATGCAAGAGCCAATTCAACCAAGCTG TCCTTAGTGACAGAAGGACATGGGGGCAGGAGACCACCTTATTTGTTGTTTGTCCTTCTC ATCTTATTGGTTGGTATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGTAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTACGGTCAAGGTGAATTTTACTAATTACTGTGAGTCAATTGGGATCAGAAAAGCTATT GCATCGGCAGCAAATCCTATCCTTTTATCAGCCCTATCTGGGGGCAGAGGTGACATATTC CCACCACACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCATTATCCATGTCTTTGATCTCAAGAACCTCAGAGGTAATCAATATGCTGACCGCTATC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAAAGAGAGTTC GACACTCGAGAGATTCGAGTCTTTGAAATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTACTCCCGAAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACTGTATTA TTATATCATGACAGCAGTGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGGATATT TTGGGCAACACCTATGGATCACATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGAA GAAAATACATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAGCGTCATGGGAACCCTTCGGAGGAAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCCCCCAAAGACGGAACAATCTCTGGATTGAT AAACAAAGCAGGTAGAGGAGACCAGTTCACTGTACTCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTAGAGATAGAGA TGTCCTCATTGAGTCCAATATAGTGGTGTTGCCTACACAGAGTATTAGATATGTCATAGC AACGTATGACATATCACGAAGTGATCATGCTATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACAATTTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTAAAATCCCTGACAGTATGATGATACACATCTCAATTGGCCTTAGGCATGATAACT GCGGTGAGAAATCCCTTACAGACGATTGAATTAAACCATCTCTAGCATTATAAAAAAACT AAGGATCCAAGATCCTTTTAGCCATGGACTCTGTATCAGTGAACCAGATTCTATACCCTG AGGTCCATCTAGATAGCCCAATTGTAACCAATAAGCTAGTATCTATTTTAGAATACGCAC GAATTAGACATAACTATCAGCTCCTTGATACAAGATTAGTGCGTAATATCAAAGAGAGAA TTTCAGAAGGGTTCTCAAACCAGATGATCATTA >CDV strain Ueno strain, from dog in Japan D85753 ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------CTATCAAACTGCAACAAATAGTGGCGAGGAC TGACTCCAATTATCATAATTAAAGAAAACTTAGGGCTCAAGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGACAATGCAAGAGCTAATTCATCCAAGCTG TCCCTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTACTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGTAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAAGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATA TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAGAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAGACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTGTATCATGACAGCAATGGTTCACAAAATGGTATT-CTGGTAGTGACGTTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAGCAAATAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACTTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCGTTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCCATTCAGACATCCCAGATTATGGATAAAGA TGTCCTTATTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGGCCCAATCCG GACGATTTCCTATACGTACCCATTTAGGCTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGATAGTATGATGATACACATCTCAATTGAACTTAAGGATGATGACT GTGGTAAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTTAG--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Hamamatsu, from dog in Japan D85754 ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------CTATCAAGCTGCAACAAATAGTGGCGAGGAC TGACTCCAATTATTATAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAAGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGACACAAAAACTAAACGAAATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAACTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCCATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGGCCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGATAGTATGATGATACACATCTCAATTGAACTGAGAGATGATGACC GTGAGAAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTTAG--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Yanaka, from dog in Japan D85755 ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------CTATCAAGCTGCAACAAATAGTGGCGAGGAC TGACTCCAATTATTATAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGACAATGCAAGAGCTAACTCATCCAAGCTG TCCCTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTACTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGTAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATA TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAGAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAGACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTGTATCATGACAGCAATGGTTCACAAAATGGTATT-CTGGTAGTGACGTTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACTTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCGTTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCCATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGGCCCAATCCG GACGATTTCCTATATGTACCCATTTAGGCTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGATAGTATGATGATACACATCTCAATTGAACTTAAGGATGATGACT GTGGTAAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTTAG--------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Canine/NTU 1-2004, Taiwan DQ191175 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTAATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACTAACTATATGGTCCTCCCGGAAACTTCCAAAGCTAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT ACCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTAGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Canine/NTU 2004, Taiwan DQ191765 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAAGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATTGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAATCTGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGGTGACGATTTGTGGTGTCATCAATTCTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Canine/NTU 3-2004, Taiwan DQ191766 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTCAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGACGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 179/94, from dog in Italy DQ226087 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCTCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGAAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAAATTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAGAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 324/03, from dog in Italy DQ494317 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAGTCATGACCTTGC?TGCTATCACTGGAGTTCGAATTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATTGGGTTCATCAGACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATGCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTATCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTGTTGACATCTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATATGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 265/02-3, from dog in Italy DQ494318 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTCGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAATGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGGAGAAGTGATACCTGTCGCTCACCCCTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCAATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT ACCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCCTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCTC ACTTTCGGACTCTGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCCATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTGACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain CDV3 DQ778941 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------CTTAGGGCTCAGGTAGTCCAGCAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTACAAGGACAATGCAAGAGCCAATTCATCCAAGCTG TCCCCAGTGACAGAAGAGCATGGGGGCAGGAGACCACCTTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCCTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGAGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGGTCAAGGTGAATTTTACAAATTACTGTGAGACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGAGATAATCAATATGCTGACCGCTACC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAAATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACTGTATTA TTATACCATGACAGCAGGGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGGATATT TGGGGCAACACCTATGGATCATATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAAAATACATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGGCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCTAAAAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATACCCCAAGTATTAACATTTGCGCC CAGGGAATCATGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATCGAGTCCAATGTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGATATATCACGAAATGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACTCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGATAATTTGTGGTGTCACCAATTTTACAGATACGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGACAGTATAATGATACACATCTCAATTGGACTTAGGCATGATGAGT ATGGTGAAAAATCCCTTACAGACGATTGAAT----------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Canine/NTU 2005-1, Taiwan DQ887547 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTAATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCTAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT ACCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTTATGGCCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H04Bp1F, from dog in Hungary DQ889177 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGCAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTACTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCCTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H05Bp2S, from dog in Hungary DQ889178 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCTATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA GAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H05Bp3S, from dog in Hungary DQ889179 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCTATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA GAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H05Bp4S, from dog in Hungary DQ889180 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCTATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA GAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H05Bp5F, from dog in Hungary DQ889181 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCTATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA GAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H05Bp6F, from dog in Hungary DQ889182 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCTATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA GAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H05Bp7F, from dog in Hungary DQ889183 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCTATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA GAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H06Bp8F, from dog in Hungary DQ889184 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCGACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAGAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H06Bp9S, from dog in Hungary DQ889185 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCGACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAGAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAGCGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H06Bp10S, from dog in Hungary DQ889186 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCCAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGACCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCGACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAGAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAGGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAGCGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H06Ny11, from dog in Hungary DQ889187 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGAGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAACTG TCCTTAGTGACAGAAGAACATGGGAGCAGGAGACCACCCTATTTGCTGTTTATCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGCTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTTAAAATTATTGGTGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAAAAGGGAATTCGACTTCCGCGACCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATTGGCAGCAAATCCCATCCTTTTGTCGGCACTCTCCAGAGGCAGGGGTGACATATTC CCACCATACAGATGTAGTGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTCTCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGATGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA CTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGTATTGGTCTCTGAGAACCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGCT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAATCT ATCGTTTACATACGGTCCGATTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCCAAGAACGGGACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAAGTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTGGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGATGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATTACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H06Ny12, from dog in Hungary DQ889188 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAACTG TCCTTAGTGACAGAAGAACATGGGAGCAGGAGACCACCCTATTTGCTGTTTATCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGCTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTTAAAATTATTGGTGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAAAAGGGAATTCGACTTCCGCGACCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATTGGCAGCAAATCCCATCCTTTTGTCGGCACTCTCCAGAGGCAGGGGTGACATATTC CCACCATACAGATGTAGTGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTCTCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGATGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA CTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGTATTGGTCTCTGAGAACCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGCT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAATAT ATCGTTTACATACGGTCCGATTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCCAAGAACGGGACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAAGTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTGGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGATGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATTACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain H06Ny13, from dog in Hungary DQ889189 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAACTG TCCTTAGTGACAGAAGAACATGGGAGCAGGAGACCACCCTATTTGCTGTTTATCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGCTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTTAAAATTATTGGTGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAGTTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAAAAGGGAATTCGACTTCCGCGACCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATTGGCAGCAAATCCCATCCTTTTGTCGGCACTCTCCAGAGGCAGGGGTGACATATTC CCACCATACAGATGTAGTGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTCTCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGATGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA CTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGTATTGGTCTCTGAGAACCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGCT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAATAT ATCGTTTACATACGGTCCGATTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCCAAGAACGGGACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAAGTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTGGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGATGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATTACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV vaccine strain EF095750 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------------------GCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAAGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTACTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTAACTAATTACTGCGATACAATTGGGCTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCAGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGATTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATTCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AAAATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GAAGATTTCTTTTACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTTTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGATAGTATGATGATACATATCTCAATTGGACTTAGGTATGATGACT GTGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTTAGTCATGGACTTCTGT------------------------- ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain isolate HL, from foxes in China EF445052 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCCCC TACCAAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGAAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATC GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGGAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGATACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTAGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAATCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGATTGACGTTACCTCTAGATGCAAGCATTGACCGCCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTACTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGGTTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain NM, from wild animals, China EF445053 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCCCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTAAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAGAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGGGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAATTT GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGTACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTAACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAAACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGAGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTATTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTACG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGGTTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain CDVBR1, Brazil EU098102 -----------AAGTCGATCCGACATTTAAACCTGATTTGACTGGAACTTCGAAATCATA TGTAAGATCACTCTGAAGTACTCTGGTCACACGTCTTACATGATTGTCAGGATTGAAATC TATAAATCCCGCCCAATTTTCTTTAAAAGCTATCAAACTGCAACAAATAGTGGAGAGGAC TGACTACGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGGGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTTATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAAATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATATAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGAATACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAATTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGCAGATGAGAGCACCGTATTG TTATATCATGACAGCAGTGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATCAAAGATTCAATAGCAACCTGGATGGC GCCTGCATTGGCCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAAACCTTTGGACGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTCAGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATCCTAGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATTCCCCATGTGTTGACATTTGCGCC CAGGGAATCGAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAACGA TGTCCTTACTGAGTCCAATTTGGTGGTGTTGCTTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACTTACCCATTTAGATTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCAATTTGAGGC AGACATCACCAACTCTACCACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATCGGGCTTAGACATGATGACT GAGGTGAGGAATCCCTCACCGATGATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTCAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATACCCTG AGGTCCATCTAGATAGCCCAATTGTAACCAATAAGCTAGTAGCTATCTTAGAGTATGCAC GAATTAAACATAACTATCAACTCCTTGATAC----------------------------- --------------------------------- >CDV strain CDVBR2, Brazil EU098103 GCAGCATACTAAAGTCGAGCCGACATTTAAACCTGATTTGACTGGAACCTCGAAATCATA TGTAAGATCACTCTGAGGTACTCTGGTCACATGTCTTACCCGATTGTCAGGATTGAAATC TATAAATCTCGCCCTATTTTCTTTTAAAGCTATCAAACTGCAACAAATAGAGGAGAGGAC TGACTAAGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCTTTCTATAAGGATAATGCAAGAGCTAATTCATCTAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGAGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCTGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATCG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACTCATCAGTAGA GAAAATACATATAACCAATCACCGTGGGTTCATAAGAGATTCAATCGCAACCTGGATGGT ACCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAGATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACTTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAATTCCTCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAGCGATCATGCAATTGTTTATTATGTTTATGACCCAAACCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAACTGGACTTAGATGTGATGACT GAGGTGAGAAATCCCTTACCGACAATTGAATTAAACCATCCCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTCAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATACCCTG AGGTCCATCTAGATAGCCCAATTGTAACCAATAAGCTAGTAGCTATCTTAGAGTATGCAC GAATTAGACATAACTATCAACTCCTTGATACAACAT------------------------ --------------------------------- >CDV strain CDVBR3, Brazil EU098104 GCAGCATACTAAAGTCGAGCCGACATTTAAACCTGATTTGACTGGAACCTCGAAATCATA TGTAAGATCACTCTGAGGTACTCTGGTCACATGTCTTACCCGATTGTCAGGATTGAAATC TATAAATCTCGCCCTATTTTCTTTTAAAGCTATCAAACTGCAACAAATAGAGGAGAGGAC TGACTAAGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCTTTCTATAAGGATAATGCAAGAGCTAATTCATCTAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGCGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAACCAATGTGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATGACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATCG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATCTT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA GAAAATACATATAACCAATCACCGTGGGTTCATAAAAGATTCAATCGCAACCTGGATGGT ACCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACTTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAATTCCTCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAGCGATCATGCAATTGTTTATTATGTTTATGACCCAAACCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAACTGGACTTAGATGTGATGACT GAGGTGAGAAATCCCTTACCGACAATTGAATTAAACCATCCCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTCAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATACCCTG AGGTCCATCTAGATAGCCCAATTGTAACCAATAAGCTAGTAGCTATCTTAGAGTATGCAC GAATTAGACATAACTATCAACTCCTTGATACAACAT------------------------ --------------------------------- >CDV strain CDVBR4, Brazil EU098105 -----ATACTAAAGTCGAGCCGACATTTAAACCTGATTTGACTGGAACTTCGAAATCATA TGTAAGATCACTCTGAGGTACTCTGGTCACACGTCTTACCCGATTGTCAGGATTGAAATC TATAAATCTCGCCCTATTTTCTTTTAAAGCTATCAAACTGCAACAAATAGTGGAGAGGAC TGACTAAGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAGCAATGCTCTCC TACCAAGACAAGGTGGGTGCTTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATATAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGAATACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATCG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA GAAAATACATATAACCAATCACCGTGGATTCATAAAAGATTCAATCGCAACCTGGATGGT ACCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCTTTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATTCCTCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAGCGATCATGCAATTGTTTATTATGTTTATGACCCAAACCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACAATTGAATTAAACCATCTCCAGCATTATAAAAAAACT AAGGATCCAGGATCCTTTCAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATACCCTG AGGTCCATCTAGATAGCCCAATTGTAACCAATAAGCTAGTAGCTATCTTAGAGTATGCAC GAATTAGACATAACTATCAACTCCTTGATACAACAT------------------------ --------------------------------- >CDV strain 111/03B, from dog in Italy DQ494319 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCAG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TTAACTAGTAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGAACAAGGTGAATTTTACCAATTACTGTGACGCAATTGGGGTCAGAAAATCCATT GCATCGGCCGCAAATCCCATCCCTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTGTTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCACC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAATGATTCGGGTCTTTGAGATAGGGTTCATCGAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAGGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAATCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCTTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATCCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGGTATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GGCGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCATTCAAAACCCTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Chunchon, South Korea EU252149 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGGAGCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCA GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCTCAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGACAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTCACCAATTACTGTGGTACAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCATTTATCAGGACTCTCCGGAGGCAGAGGTGACATATTC CCACTATACAGATGCAGTGGAGCTATTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAATGATTCGAGTCTTTGAGATAGGGTTCATCAAGCGGTGGCTGAATGACATG GGATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAACTTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGGGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTTTTAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAATCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGATGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTATCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCTTAAG GATTGAAAGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCCTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain TW/06-K127, Taiwan EU296486 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTCGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAACCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTAATATCAAGAGCATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCTAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATACAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT ACCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTGCATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTACTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain TW/05-PT10, Taiwan EU296487 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAA-TGGTATTTCTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC GCTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain TW/05-PT13, Taiwan EU296489 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGATTTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCGTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC GCTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGCTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCAGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain JL(07)1, from wild animals in China EU325728 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGGGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGGAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CATAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain LN(07)1, from raccon dog in China EU325730 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGACAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTGCGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGCGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATATGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATAACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAGTAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCGATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCGTTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGAATCCGGATGGCTTGCCATACCCCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGGAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCTATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain HLJ2-07 from China EU593894 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAGCGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGCTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGGGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGCAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACTAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATCTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain XJ2, from dog in China EU684265 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTC TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCACTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCTTAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGTAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCAACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGTGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 07Q72, from dog in South Korea EU716072 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTTTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGAGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAGACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGAGGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCTTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATGAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 97 Jindo from South Korea EU716073 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGAAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAAGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATACAATTGGGGTCAAAAAATCCATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGTCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATATCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAAATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATCCCTCCCAAGAACGGAACAATACTTGGTTTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGAAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAGCTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 98Marten from South Korea EU716074 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCACCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTTCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCAGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATACAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCAGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAAGCTGAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTCCACATGACAGTGTT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACATCTGGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCACC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGGAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATATGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 07D111 from South Korea EU716075 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCACCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTTCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACCAATTACTGTGATACAATTGGGGTCAGAAAATCCATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCAGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCCATC TCAGACGGAGTGTATGGTAAAACTTACTTGTTAGTGCCTGATTATATTGAAAGGGAGTTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTCCACATGACAGTGTT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAAATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTGGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCACC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGGAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATATGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Bruno107Arg2005FJ011005, from dog in Argentina ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTTTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCTCTAGTGACAGAAGAGCAAGGGGGTAGGAGACCACCCTATCTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGACCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAACTAGCAATATGGAATTCAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACACCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTGAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTTCTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATCAGCAGCAAATCCTATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCTCCATACAGATGCAATGGAGCTGCTACTTCAATAGGCAGAGTTTTCCCTCTATCTGTG TCATTGTCCATGTCCTTGATCTCCAGAACAGCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTTGATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GAAACGCAGAAGATTCGAGTCTTTGAGATCGGGTTCATCAAACGGTGGCTGAATGACATG TCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TTGGGGCACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAAAAGCAATCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGGGGAGGACAATT GCCATCCTATGGGCGGCTGACATTACCTCTAGATCCAAGTATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAAAACGGAACAGTTCTTGGATTGAT GAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAGGTGGAAATTGTTATTTACCTATTCAAACCTCCCAGATTATGGATAAAGA TGTCCTTGCTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGATCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTATGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TGACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCT----------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Argentina 23, from dog in Argentina FJ392652 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCCGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAGAAACTAAACGAGATCAAGCAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGAGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACTTTGAAGGGGAGTTC GACACGCAAAAGATTCGGGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTACATGTTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATCG TTATATCATGACGGCAGTGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA GAAAATACATATAACCAATCACCGTGGATTCATAAAAGATTCAATCGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTGGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCAGTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTCAGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACTTACCCATTTAGACTAACTACCAAGGGTAGACCTGTTTCCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCAATTTGAGGC AGACATCACCAACTCTACCACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain BV1, from fox in Germany FJ416336 ------------------------------------------------------------ ------------------------------------------------------------ --------------------CTATAAAAGCTATCAAACTGCAACAAATAGTGGAAAGGAC TGACCACGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTTGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTCTGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCAATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACAACTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACAATCTCCAGCATTATAAAAAAACT GAGGATCCAGGATCCTTTAAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATATCCTG GGG--------------------------------------------------------- ------------------------------------------------------------ --------------------------------- >CDV strain BV2, from fox in Germany FJ416337 ------------------------------------------------------------ ------------------------------------------------------------ --------------------CTATAAAAGCTATCAAACTGCAACAAATAGTGGAGAGGAC TGACCACGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCAACAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCAATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACAACTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACAATCTCCAGCATTATAAAAAAACT GAGGATCCAGGATCCTTTAAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATATCCTG GGG--------------------------------------------------------- ------------------------------------------------------------ --------------------------------- >CDV strain BV3, from badger in Germany FJ416338 ------------------------------------------------------------ ------------------------------------------------------------ --------------------CTATAAAAGCTATCAAACTGCAACAAATAGTGGAAAGGAC TGACCACGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTTGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTCTGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCAATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACAACTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACAATCTCCAGCATTATAAAAAAACT GAGGATCCAGGATCCTTTAAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATATCCTG GGGGCCCATC-------------------------------------------------- ------------------------------------------------------------ --------------------------------- >CDV strain BV4, from fox in Germany FJ416339 ------------------------------------------------------------ ------------------------------------------------------------ --------------------CTATAAAAGCTATCAAACTGCAACAAATAGTGGAAAGGAC TGACCACGATTATCGAAATTAAAGAAAACTTAGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTTGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTCTGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCAATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACAACTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACAATCTCCAGCATTATAAAAAAACT GAGGATCCAGGATCCTTTAAGTCATGGACTCTGTTTCAGTAAATCAGATTCTATATCCTG GGGTCC------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain LN(08)1, from wild animals in China FJ423609 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGGGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGGCAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAAACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 4L70214, South Africa FJ461693 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGATGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAGTTGAGGAGGTGATACCTATCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 21L from South Africa FJ461694 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAAGTGGGTGCCTTCTATAAGGATAATGCAAGGGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCTTACTGGTTGGAGTCCTGGCTTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAGTTGGGATCAGAAAATCTATT GCACTGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAAGGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTGTC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGAGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGATATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATCGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGGTGAGAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAGGACGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAGGTTGAAGAGGTGATACCTGTCGCTCATCCATCAGTGGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCTTTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTGAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTAACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACCACCAAGGGTAAACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAGACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 13sp from South Africa FJ461695 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGACGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAGTTGAGGAGGTGATACCTATCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 1sp from South Africa FJ461696 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAAGTGGGTGCCTTCTATAAGGATAATGCAAGGGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCTTACTGGTTGGAGTCCTGGCTTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCTATT GCACTGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAAGGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTGTC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGAGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATCGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGGTGAGAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGACGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAGGTTGAAGAGGTGATACCTGTCGCTCATCCATCAGTGGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCTTTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTGAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTAACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACCACCAAGGGTAAACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 7L from South Africa FJ461711 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAAGTGGGTGCCTTCTATAAGGATAATGCAAGGGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCTTACTGGTTGGAGTCCTGGCTTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAGTTGGGATCAGAAAATCTATT GCACTGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAAGGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTGTC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGAGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGATATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATCGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGGTGAGAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAGGACGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAGGTTGAAGAGGTGATACCTGTCGCTCATCCATCAGTGGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCTTTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTGAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTAACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACCACCAAGGGTAAACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAGACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 4L7039 from South Africa FJ461714 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGATGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAATTGAGGAGGTGATACCTATCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGGGTGGGATGACGATTTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 4sp from South Africa FJ461715 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGAGAGTTGACACTGGCTTCCTTGTGTGTGGATGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TTGGGCAACACCTATGGACCAAATTGAGGAGGTGATACCTATCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 16L from South Africa FJ461716 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGACGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCGGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGATGATAGCACTGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAGTTGAGGAGGTGATACCTATCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 2L from South Africa FJ461720 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAAGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTATTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAAGGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGATGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAGTTGAGGAGGTGATACCTATCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACCACCAAGGGTAAACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 12sp from South Africa FJ461721 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCACTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGACGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAGTTGAGGAGGTGATACCTATCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 23L from South Africa FJ461722 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACTCCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTGCTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTGGATGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGGGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAGTTGAGGAGGTGATACCTATCGCTCATCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 23sp from South Africa FJ461723 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGCGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGATCAGGAGACCGCCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAGTCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACTCCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAAACAAAC TTCTTCAATCCGAGCAGGGAATTCGACTTCCGAGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAGGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAAAAAATCTATT GCATCGGCAGCAAAACCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGGGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAGGCCAAGGTATGT ACTATTGCAGTGGACTGGGTGACACTGGCTTCCTTGTGTGTGGATGATAGCACCGTATTA TTGTATCATGACAGCAATGGTTCACAAGGTAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGACCAAGTTGAGGAGGTGATACCTATCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGCGGTTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAGACAAGAGGAACAAAAAATTTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGACCTTACCTTTAGATGCAAGCATTGATCTTCAACTTAACAT ATCGTTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCGCC TAGGGAATCAAGTGGAAGTTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATACGTCGTAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACAGGTTCGAGAC TGACATCACCAACTCCACAACCAGTGTTGAGAACTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain TW1, Taiwan FJ705230 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACCAATTACTGTGATACAGTTAGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCCTCTTATGGGCGGTTGACATTACTTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain TW3 from Taiwan FJ705232 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATCTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACCAATTGCTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTACTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAGCTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATAAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain TW6 from Taiwan FJ705235 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACGCCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATC TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTATCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC GCTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain TW7 from Taiwan FJ705236 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACGCCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAATGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTTCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCAGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAAACCTATCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC GCTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTAGTGTTACCTACACAGAATTTTAGGTATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATTACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 5sp, from dog in South Africa FJ461718 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAAGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTACTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTAACTAATTACTGCGATACAATTGGGCTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCAGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGATTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACTTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATTCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AAAATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GAAGATTTCTTTTACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTTTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain SD(08)1, from dog in South Africa FJ810215 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGACAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTAAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTTATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTGCGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGCGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATAACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAGTAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCGATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCGTTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGAATCCGGATGGCTTACCATACCCCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGGAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCTATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV srain BJ080514, from dog in China FJ848530 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTGCGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCGACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAAGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTGGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain BJ080406, from dog in China FJ848535 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGACCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTGCGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGCGACATATTC CCGCCGTACAGATGTAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATAACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAGTAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA AAGAAAATCCTACCCGATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAAGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCGTTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGAATCCGGATGGCTTACCATACCCCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCTATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain BA54, from dog in China FJ851452 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGGGCCAGAGGTGACATATTC CCGCCGTACAAATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGGCAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAAATTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATACGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain BA134, from dog in China FJ851456 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGAGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAGACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTGCCTCTAGATCCAAGCATTGACCTTCAGCTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCTTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATGAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain C2, from dog in South Korea FJ868161 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCATACTTGCTGTTTGTTCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATGTGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCAGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAAGCTGAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTCCACATGACAGTGTT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACATCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTCTTGACATTTGCACC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGGAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATATGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGACAGTATGATGATACACATCTCAACTGGACTTAGGTATGATGACC ATGGTGAGGAATCCCTTACCGTCGATTGAATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain C3, from dog in South Korea FJ868162 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCA?AGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAAATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTAACTCTGGGAATATT TGGGGCAACACCTATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGAGCAGTTCACTGTGACACCTCATGTGTTGACATTTGCGC? CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCTAACATCTCAGATTATGGATAAAGA TGTCCTTATTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTTTTATACATACCCACTTAGACTAACTACCAAGGGTAGACCTGATTTTTTAAG GATTGAAAGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATGAGATTCTCATGTAA CCGTTCAAAACCTTGATTGTATGCTGATACACATCTCATTTGAACTGAGGGATGATGACC GTGGTAAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain C4, from dog in South Korea FJ868163 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTCCACATGACAGTGTT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACATCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCTTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATGAGATTCTCATGTAA CCGTTCAAAACCTTGATTGTATGCTGATACACATCTCATTTGAACTGAGGGATGATGACC GTGGTAAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain C5, from dog in South Korea FJ868164 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCTAAAGCTGAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTCCACATGACAGTGTT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCGATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACATCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCTTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATGAGATTCTCATGTAA CCGTTCAAAACCTTGATTGTATGCTGATACACATCTCATTTGAACTGAGGGATGATGACC GTGGTAAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain R2, from dog in South Korea FJ868167 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATATGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGAGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAGACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGTATGGCTTACCATTCCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAATTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GGCGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAGAACCTTGACAGTATGGTGATACACATCTCAATTTGACTTAGGTATGATGACT ATGGTGAGGAATCCCTTACCGCCGATTGTATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain R4, from raccon dog in South Korea FJ868169 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG ACCTTAGTGACAGAAGAACAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTTCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCGCTGGAGTTCGATTTCGCCAGGTG TCAACTAGCAATATGGAATTTGGCAGATTGCTGAAGGATGATTTGGAGAAATCGGAGGCC GTGCATCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCTAAGGTGTGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAAATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTAACTCTGGGAATATT TGGGGCAACACCTATGAATCAAGTAGAAGAGGTGATACCTGTCGCTCATCCATCAGTAGA AAAGATACATATCACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGCAACAAGAAGGACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTCGGAGGAGTACAGTT GCCATCTTACGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTGATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTAAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCCCATGTATTGACATTTGCGCC CAGGGAGTCGAGTGGAAATTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACGCAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGAGAAAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGTC TGATATCACCAACTCTACAACCAGTGTCGAAGATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAGAACCTTGACAGTATGGTGATACACATCTCAATTTGACTTAGGTATGATGACT ATGGTGAGGAATCCCTTACCGCCGATTGTATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 3148-03, from dog in Austria GQ214373 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTGTCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAG CCGTTCAAAACCCTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 4520-02, from dog in Austria GQ214376 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGACAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTGTCAGTA TCATTGTCCATGTCTGTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAACACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCCCACCCATCAATAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGATGGCTTACCATTCCACCCAAGAACGGAACAGTCCTTGGACTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGTGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTATCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCTGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 5253-02, from dog in Austria GQ214378 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGACAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTGTCAGTA TCATTGTCCATGTCTGTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAACACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCCCACCCATCAATAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGATGGCTTACCATTCCACCCAAGAACGGAACAGTCCTTGGACTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGTGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTATCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCTGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 5417-02, from dog in Austria GQ214380 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGACAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTGTCAGTA TCATTGTCCATGTCTGTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAACACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCCCACCCATCAATAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGATGGCTTACCATTCCACCCAAGAACGGAACAGTCCTTGGACTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGTGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTATCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCTGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 5825-02, from dog in Austria GQ214384 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGACAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTGTCAGTA TCATTGTCCATGTCTGTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAACACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCCCACCCATCAATAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGATGGCTTACCATTCCACCCAAGAACGGAACAGTCCTTGGACTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGTGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTATCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCTGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 17, from dog in China GQ332532 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGAAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTAAAAGAGGATATGGAAAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCTCAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCACCGGAGCCAGGGGTGACATATTC CCGCCGTACAGATGCAGTGGCGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAAATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGTAACCTGGATGGT GCCTGCATTGGTCTCTGAAAAACAAGAGGAGCAAAAAACCTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGGGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGAGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTATTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGAGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTTCTACG GATTGAATGTTTTGTGTGGGATGATGATTTGTGGTGTCACCAATTTTACCGGTTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 23, from dog in China GQ332534 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGGGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACTAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTACGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV from Spain GU001863 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACTCTATTTGCTGTTTGTCCTTCTT ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCACGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCATCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAAAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTTTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGGTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAAAGCACCGTATTG TTATATCATGACAGCAATGATTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACTTATGGATCAAGTTGAAAAAGTGATACCTGTCGCACACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAAATTCAATAGCAACCTGGATGGT GCCTGCATTGGTGTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCTTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGATGGCTTACTATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCACGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATATTATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACGTCACAAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAAATTTTCATGTGA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Rockborn-Candur GU266280 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAAGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTACTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTAACTAATTACTGCGATACAATTGGGCTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCAGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGATTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGTATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATTCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTTTACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTTTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGATAGTATGATGATACATATCTCAATTGGACTTAGGTATGATGACT GTGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain SNP350/09/ITA, from red foxes in Italy HM120874 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAATTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGATCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 08RS108_Badger_TN_01_08, from badger in Italy HM443704 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTTTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGCCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTT---------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 07RS1463_Fox_UD_09_07, from foxes in Italy HM443705 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGCAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT ACCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACTATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAAC------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 08RS2382_Dog_RO_11_08, from dog in Italy HM443706 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAGTCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAAGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGATTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGGTTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCACTGGCCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAAATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 08RS106_Fox_TN_01_08, from foxes in Italy HM443707 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATCC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTG--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 09RS295_stone martin_TN_02_09 from stone martin in Italy HM443708 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGGATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACATGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGYTAACTSCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACTCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GAMGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTG--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 09RS482_Fox_TN_03_09, from fox in Italy HM443709 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATCC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTG--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 1900_Dog_PD_00, from dog in Italy HM443710 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCTTTGCTTGCTATCACGGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAAAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACTAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCCCACCCATCAGTCGA AAAATTACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACCTCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATTCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTACTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTGGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 193_Dog_VI_01, from dog in Italy HM443711 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCTGGAGGCAGAGGTGACATATTC CCACCACACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACAAGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGATACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACCTCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 2283_Dog_TV_05, from dog in Italy HM443712 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTCTTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACAATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATTACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 2894_Dog_BL_00, from dog in Italy HM443713 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------CTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCTGGAGGCAGAGGTGACATATTC CCACCACACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACAAGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGATACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACCTCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GAAGATTTCTTATACACACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 3204_Dog_BZ_00, from dog in Italy HM443714 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTTTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTTACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAATGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACAACTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTTGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 323_Dog_BL_04, from dog in Italy HM443715 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATGTGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCTCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGAAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAAATTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAGAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 4454_Dog_TV_00, from dog in Italy HM443716 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTTTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTTACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAATGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACAACTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTTGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 5735_Dog_RO_00, from dog in Italy HM443719 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCTGGAGGCAGAGGTGACATATTC CCACCACACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTATATAGAAGGGGAGTTC GACAAGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGATACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACCTCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATCTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 6291_Dog_PN_02, from dog in Italy HM443721 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGAAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACCCAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 6897_Dog_PD_02, from dog in Italy HM443722 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGGTACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCACATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATGTATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 9513_Dog_PD_02, from dog in Italy HM443724 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCCTGGCCTTGCTTGCTATCACCGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAAACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTACATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAACCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain VIR3498_Badger_BZ_10_06, from badger in Italy HM443725 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAAGATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain VIR3514_Fox_BZ_10_06, from fox in Italy HM443726 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATCGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain HeB(09)2, from fox in China HM448831 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAGTTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGGGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTGTATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain HeB(09)3, from dog in China HM448832 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGTTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCAGGGGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAAGCGTCATGGGAACCCTTTGGAGGAGGGCAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain SD(09)3, from fox in China HM448834 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCT TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGGGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGGGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGTGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAGACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAGCTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTGCCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain SMLM3, from wolf in Portugal HM563057 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCATCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAATTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTTTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAATTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAAAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACTTATGGATCAAGTTGAAGAAGTGATACCTGTYGCWCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAAATTCAATAGCAACCTGGATGGT GCCTGCATTGGTATCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCTTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAAATTCTCATGTGA CCGTTAAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGACGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain SMLM75, from wolf in Portugal HM563058 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGTTG TCCTTGGTGACAGAAGAGCAGGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGACAATCTATT GCATTGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATA CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAACACTGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTAGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTYGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAGGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAAACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGGTGGCTTACCATTCCACCCAAGAACGGAACAGTCCTTGGATTGGT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCGATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTGAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCTGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACC GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Lili, from dog in Portugal HM563059 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGTTG TCCTTGGTGACAGAAGAGCAGGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGACAATCTATT GCATTGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATA CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAACACTGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTYGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATGGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAAACGGTATGGATTATTATGAAAGCCC ACTTCCGGACTCCGGGTGGCTTACCATTCCACCCAAGAACGGAACAGTCCTTGGATTGGT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCGATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTGAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCTGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACC GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain W10/339, from fox in Switzerland JF810107 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAGATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAATTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACGATCGGGGTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAGACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACAATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain W10/845, from fox in Switzerland JF810108 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAACAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAATTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACGATCGGGGTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain W10/2733, from lynx in Switzerland JF810109 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGTAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAATTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACGATCGAGGTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAGACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGAGAATCGAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain W02/2253, from martes in Switzerland JF810110 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAATTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACGATCGGGGTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 124/07, from raccon in Germany JN153019 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGTAGAAGACCACCCTTTTTGCTGTTTGTCCTTCTC GTCCTACTGGTTGGGATCATGGCCTTGCTCGCTATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAATGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGGTGGTATT-ATAGTAGTGACGCTGGGAATATT CGGGGCAACACCTATGGATCAAGTTGAAGAGGTAATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGATCTCTGGGGAGCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTCGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCCCC CAGGGAATCACGTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTGACTATTAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTATGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACTAGTGTTGAGAATTTGGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 125/07, from raccoon in Germany JN153020 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCCCTAGTGACAGAAGAGCAAGGGGGTAGAAGACCACCCTTTTTGCTGTTTGTCCTTCTC GTCCTACTGGTTGGGATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGATGCC GTACATTATCAAGTCAGAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAATGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGGTGGTATT-ATAGTAGTGACGCTGGGAATATT CGGGGCAACACCTATGGATCAAGTTGAAGAGGTAATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGATCTCTGGGGAGCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTCGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCCCC CAGGGAATCACGTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTGACTATTAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTATGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACTAGTGTTGAGAATTTGGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 140/07, from raccoon in Germany JN153021 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGTAGAAGACCACCCTTTTTGCTGTTTGTCCTTCTC GTCCTACTGGTTGGGATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAATGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGGTGGTATT-ATAGTAGTGACGCTGGGAATATT CGGGGCAACACCTATGGATCAAGTTGAAGAGGTAATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGATCTCTGGGGAGCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTCGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCCCC CAGGGAATCACTTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTGACTATTAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTATGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACTAGTGTTGAGAATTTGGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 188/07, from raccoon in Germany JN153022 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGTAGAAGACCACCCTTTTTGCTGTTTGTCCTTCTC GTCCTACTGGTTGGGATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAATGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGGTGGTATT-ATAGTAGTGACGCTGGGAATATT CGGGGCAACACCTATGGATCAAGTTGAAGAGGTAATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGATCTCTGGGGAGCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTCGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCCCC CAGGGAATCACGTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGTCGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTGACTATTAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTATGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACTAGTGTTGAGAATTTGGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 236/07, from raccoon in Germany JN153023 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGTAGAAGACCACCCTTTTTGCTGTTTGTCCTTCTC GTCCTACTGGTTGGGATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAATGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGGTGGTATT-ATAGTAGTGACGCTGGGAATATT CGGGGCAACACCTATGGATCAAGTTGAAGAGGTAATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGATCTCTGGGGAGCAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCTAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTCGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTTCCCC CAGGGAATCACGTGGGAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTGACTATTAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTATGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACAACTAGTGTTGAGAATTTGGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 408/589/07, from red fox in Germany JN153024 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGCAATGGTCCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTCACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCCTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 458/07, from red fox in Germany JN153025 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGCAATGGTCCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTTTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTCACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTCAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATATCCTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain ZH(05), from raccoon dog in China JQ732170 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCCATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAAAACATCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGTTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTA TTATATCATGACAGCAATGGTTCACAAGACAGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAAGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCTTTTGGAGGAGTACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAATACTTGGATTGAT AAATAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAGTCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCGTAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACAGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTCGAAAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain LDH(06), from fox in China JQ732173 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGACGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGATTGGAATCCTGGCCTTGCTTGCCATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTCCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGTATTAACCCACCT AGCAAGATCAAGGTGAATTTTACTAATTACTGTGATACAGTTGGGGTCAAAAAATCTATT GCATCGGCAGCAAATCCCATCATTTTATCAGCACTCTCCGGAGCCAGAGGTGACATATTC CCGCCGTACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTATTCCCCCTATCCGTA TCATTATCCATGTCTTTGATATCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATCTGCTAGTGCCTGATTATATTGAAGGGGAATTC GACTCGCAAAAGATTCGAGTCTTTGAGATAGGGTTTATCAAACGGTGGCTGAATGACATG CCTTTACTCCAGACAACCAACTATATGGTCCTCCCGGAAACTTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGCTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAACGGTTCACAAGATGGTATT-CTAGTAGTGACATTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTATCGCTCACCCATCAGTGGA GAGAATACATATAACAAATCACCGAGGGTTCATAAAAGACTCAATAGTAACCTGGATGGT GCCTGTATTGGTCTCTGAGAAACAAGAGGAGCAAAAAAACTGTCTGGAGTCTGCTTGTCA CAGAAAATCCTACCCTATGTGCAACCAGACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATATGGTCCGGTTATACTGAACGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATACCTCCTAAGAACGGGACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTACCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACATACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCTTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGAC TAACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATGAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain MCDV216-L, from Marmota caudata in Switzerland JQ966309 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCGCCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTACTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAATTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACGATCGGGGTCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCGGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATTTCAAAAACATCAGGGATAACCAATATGCTAACTGCCATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATTAAACGGTGGCTGAATAACATG CCATTATTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAATTGACACTAGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGATAGTAATGGTTCACAAGGTGGTGTT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAATGATACCTGTCGCTCACCCGTCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCGAGCATTGACCTTCAACTTAACGT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCTGGGTGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACAATATCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGAATTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAATCAGTGTTGAGAATTTAGTCCATATAAGATTCTCATGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Argentina 26, isolate Ramon from dog in Argentina KC257464 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTTTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCCCTAGTGACAGAAGAGCAAGGGGGTAGGAGACCACCCTATCTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGACCTTGCTTGCTATCACCGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTCAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACACCACCAAGTCATGGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTGAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTTCTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATCAGCAGCAAATCCTATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCTCCATACAGATGCAATGGAGCTGCTACTTCAATAGGCAGAGTTTTCCCTCTATCTGTG TCATTGTCCATGTCTTTGGTCTCAAGAACAGCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGCAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GAAACGCAAAAGATTCGAGTCTTTGAGATCGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCCCTGTATTG TTATATCATGACGGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAAAAGCAATCTGGATGGT GCCTGCATTGGTCTCTGATAAACAAGAGGAACAAAAAACTTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGGGGAGGACAATT GCCATCCTATGGGCGGCTGACATTACCTCTAGATCCAAGTATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCACTCCTCCCAAAAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGCAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC TAGGGAATCAGGTGGAAATTGTTATTTACCTATTCAAACCTCCCAGATTATGGATAAAGA TGTCCTTGCTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGATCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTATGGGATGACGATTTGTGGTGTCATCAATTTTACCGATTCGAGGC TGACATCACTAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGT-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >Morbillivirus, seal isolate, from Lake Baikal X84998 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAGCAATGCTCTCC TACCAAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTTATCCAAGCTG TCTTTAATGATAGAAGAGCAAGGGGGCAGGAGACCACCTTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCATCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC ATACATCACCAAGTCATAGATGTCTTGACCCCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGAGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGTTACTACTTCAGTTGGCGAATCTTTCCCCCTATCAGTA TCATTATCCATGTCCTTGATCTCAAGAACATCTGAGATAATCAATATGCTGACCTCTATC TCTGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGTCAACCAACTATATGATCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG CTATATCATGACAGTAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGTATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCTGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAGAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTACGGGCGGTTGCCGTTACCTCTAGATGTAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCCCCCAAGAATGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGGCGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAAATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GTGGTGAGAAATCCCTTACTGACTATTGAATTAAACCATCTCTAGCATTATAAA------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >Morbillivirus, German ferret isolate X84999 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAGCAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTACTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGTTAGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGATAGATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTGCGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATTCTTTTATCAGCACTCTCCGAAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTATATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAGGGGGAGTTT GACACGCAAAAGATTCGAGTATTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGGTACCTGTCGCTCACTCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGATATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTCTTGGACTCTGGATGGCTTACCATTCCTCCCAGGAACGGAACAATCCTTGGAATGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAACCCCTCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGGAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTATTGAGTCCAATTTAGTGGTGTTGCCTACGCAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATATGTACCCATTTAGACTAACTACCAAAGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATAACGATTTGTGGTGTCACCAATTTTACCGATTCGAGGC TGACATCACCAACTCTACATCCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGAAAGTATGATGATACACATCTCAATTGGACTTAGGCAGGATGACT GTGGTGAGAAATCCCTTACAGACGATTGAATTAAACCATCTCTAGCATTATAAA------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >Morbillivirus, German dog isolate X85000 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAGCAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAAAAAGTCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAGTATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGAGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACTTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAGGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCTAGCATTATAAA------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV Convac vaccine strain Z35493 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAGCAATGCTCTCC TACCAAGACAAGGCGGGTGCCTTCTACAAGGATAATGCAAGAGCCAATTCAACCAAGCTG TCCTTAGTGACAGAAGAACATGGGGGCAGGAGACCACCTTATTTGTTGTTTGTCCTTCTC GTCCTATTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTCCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATCGGAGATGAGATT GGGTCACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGAGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGGTCAAGGTGAATTTTACTAATTACTGTGAGTCAATTGGGATCAGAAAAGCTATT GCATCGGCAGCAAATCCTATCCTTTTATCAGCCCTCCCTGGGGGCAGGAGTGACATATTC CCACCACACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCATTATCCATGTCTTTGATCTCAAGAACCTCAGAGATAATCAATATGCTGACCGCTATC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGCGCCTGATGATATAGAAAGAGAGTTC GACACTCAAGAGATTCGAGTCTTTGAAATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATCACTCCAAACAACCAACTATATGGTACTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACTGTATTA TTATATCATGACAGCAGTGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGGATATT TGGGACAACACCTATGGATCACATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAAAATACATATAACTAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAACCCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCCAAAAACGGAACAATCCTTGGATTGAT AAACAAAGCAGGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTAACATTTGCGCC CATGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATTGAGTCCAATTTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGACATATCACGAAGTGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACAATTTGTGGTGTCACCAATTTTACAGATTCGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGACAGTATGATGATACACATCTCAATTGGACTTAGGCATGATAACT GTGGTGAGAAATCCCTTACAGACGATTGAATTAAACCATCTCTAGCATTATAAAAA---- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain, from Danish mink Z47759 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCTAGAGCCAATTCATCCAAGCTG TCCTCAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCTTATTTGCTGTTTGTCCTTCTC ATTCTACTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTTTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGATTTCCGCGACCTCCATTGGTGCATTAACCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTGCTACTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCCGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGGTGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTGTT-CTAGTAGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTTGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCGATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAGGCATTGACCTTCAACTTAACAT ATCGTTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCGGTTCACTGTAACCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGGAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAGAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACGAATGATATATCCCGGGACGATCATGCGATTGTTTATTATGTTTATGACCCAATTCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAAGC TGACATCACCAATTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGGATGATGATACACATCTCAATTGGACTTAGGTATGATGACT GTGGTGAGAAATCCCTTATCGACGATTGAATCCAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from Greenlandic dog Z47760 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGATAAGGTGGGTGCCTTCTATAAGGATAATGCCAGAGCTAATTTATCCAAGCTG TCCTTAGTGACGGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAATCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTGCGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATTCTTCAAAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACAGCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATCCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGCAGATGAGAGCACCGTATTA TTATATCATGACGGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGTTTCATAAAAGATTCAGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCAGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCTTCTTATGGGCGGTTGACGTTACCTCTAGATGCAAGCATTGACCGTCAACTTAACAT ATCATTTACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCCCCCAAGAATGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTCATCCCTCATGTGTTGTCATTTGCGCC TAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACGTATGATATATCCCGGAACGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACTTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTATGGGATGACGATCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCGACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATAACT GTGGTGGGAAATCCCTTACTGACTATTGAATTAAACTATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from Danish dog Z47761 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCCAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGTAAATCCCATCCTTTTATCAGCACTCTCCGGAGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTATCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGGAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from American dog Z47762 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCCAGAGCTAATTCATCTAGGCTG TCCTCAGTGACAGAAGACCAAGGAGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTCGCTATCACTGGAGTCCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCACTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTGAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAGTTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACGAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCTATCCTTTTATCAGCACTCTCCGGAGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGGGCCACTACTTCAGTAGGCAGAGTCTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAACCAATATGCTAACCTCTATC TCAGACGGAGTGTATGGTAAGACTTATTTGCTAGTTCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAACGGCATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTGGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTTGCTCACCCATCAGTCGA AAAAATACATATAACAGATCACCGTGGGTTCATCAAAGATTCAACAGCAACCTGGATGGT GCCTGCACTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCCTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACATCTAGATCCAAGCATTGACCTTCAACTTAACAT CTCATTTACATACGGTCCGATTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACTGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGCTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGCAGACCTGATTTCTTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACAGCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTGA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from javelina Z47764 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCCAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGACCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTTGCTATTACTGGAGTTCGATTTCACCAAGTA TCAACTAGTAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAGTTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCTATCCTTTTGTCAGCACTCTCCGGAGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTTGGCAGAGTTTTCTCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTACTTGCTAGTTCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTGGTGACACTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTTGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCACTGGTCTCTGGGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGGAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT CTCATTTACATACGGTCCGGTCATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATCCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTATAATCCCCCATGTGTGGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATCTAGTGGTGTTGCCTACACAGAATTTTATATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATATGTACCCATTTAGACTAACTACTAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGAC TGACAGCACCAACTCTACAACCAGTATTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATTTCAATTGGACTTAGGTATGATGACT GTGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from raccoon Z47765 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGACAATGCCAGAGCTAATTCATCCAAGCTG TCCTCAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCATGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAACATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAGTTCGACTTCCGCTATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCTATCCTTTTATCAGCACTCTCCGGAGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGTGCTACTATTTCAGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATGTCAAGGACATCAGAGATAATCAATATGCTAACCGCTATC TCAAACGGAATGTATGGTAAAACCTATTTGCTAGTTCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTACTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTCTTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTGGTGACGTTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTTGCTCACCCATCAGTCGA AAAAATACATATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAGAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGCTCCAAGCATTGACCTTCGACTTAACAT CTCGTTTACATACGGTCCGGTTATACTGAATGGCGATGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACCATTCCTCCCAAGAATGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGAGAATCAAGTGAAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCACAGC AACATATGATATATCCCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCCAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGAC TGACAGCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAG CCGTTCAAAACCTTGACAGTATGATGATACACATTTCAATTGGACTTAGGTATGATGACT ATGGTGAGAAATCTCTTACTGACGATTGAACCAAACCATCTCCAGCATTATAAAAAAA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from Chinese Leopard Z54156 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------------------AATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCTAGGCTG TCCTTAGTGACAGAAGACCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTGCTCGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCACTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTGAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTTAATCCGAACAGGGAGTTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCTATCCTTTTATCAGCACTCTCCCGGAGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAGTGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAAATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTTCCTGATTATCTTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGGTGGTATT-CTAGTGGTGACGCTGGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTTCCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGGTTCATCAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT CTCATTTACATACGGTCCGGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCCC ACTTTTGGACTCCGGATGGCTTACTATTCCTCCCAAGAACGGAACAGTCCTTGGATTAAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTATATATGTCATAGC AACATATGATATATCCAGGGGCGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACGCATTTAGACTAACTACCAAGGGCAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGCCACCAATTTTACCGATTCGAGGC TGACAGCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATTTCAATTGGACTTAGGTATGATGACT GTAGTGAGAAATCCCTTACAGACGATTG-------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from Black Panther Z54166 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------------------AATGCTCTCC TACCAAGATAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGGAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTACTGGTTGGAATCATGGCCTTACTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAGTTCGACTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGATCAAAGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACATACCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCTGTAGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTAACCGCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTTCCTGATTATATTGAAGGGGAGTTC GACACACAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATGACATG CCATTACTCCAGACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGTACCATATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTGGTGACGCTAGGAATATT TGGGGCAACACCTATGGATCAAGTTGAAGAGGTGATACCTGTTGCTCACCCATCAGTAGA AAAAATACATATAACCAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAGTTGTCTGGAGTCGGCCTGTCA AAGAAAATCTTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT CTCGTTTACATACGGTCCGGTTATACTAAATGGAAACGGTATGGATTATTATGAAAGCCC ACTTTTGGGCTCCGGATGGCTTACCATTCCTCCCAAAAACGGAACAGTCCTTGGATTGAT AAACAAAGCAGGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCTCAGATTATGGATAAAGA TGTCCTTACTGAGTCCAATTTAGTGGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGGGGCGATCATGCGATTGTTTATTATGTTTATGACCCAATCAG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCTTAAG GATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTCGAGAC TGACAGCACCAACTCTACAACCAGTGTTGAAAATTTAGTCCGTATAAGATTCTCATGTAG CCGTTCAAAACCTTGACAGTATGATGATACACATTTCAATTGGACTTAGGTATGATGACT ATGGTGAGAAATCTCTTACTGACGATTG-------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from Germany Z77671 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG CCCTTAGTGACAGAAGAGCAAGGGGGCAGAAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGCTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACGGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCAGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACACATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCTAATTTAGTGGTGTTGACTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCTAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain from Germany Z77672 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGAAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCAGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGAATACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGGTCATCAAACCGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACACATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACATACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCTAATTTAGTGGTGTTGACTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCTAGCATTATAA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 4513, from Germany Z77673 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------AGGGCTCAGGTAGTCCAACAATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCTAATTCATCCAAGCTG TCCTTAGTGACAGAAGAGCAAGGGGGCAGAAGACCACCCTATTTGCTGTTTGTCCTTCTC ATCCTTCTGGTTGGAATCATGACCTTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCACCGAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGGTT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCACCT AGTAAGATCAAGGTGAATTTTACTAATTACTGCGATACAGTTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCACTCTCAGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTGGGCAGAGTTTTCCCCCTATCAGTA TCATTGTCCATGTCTTTGATCTCAAAAACATCAGAGATAACCAATATGCTAACTGCTATC TCAGACGGAGTGTATGGTAAAACCTATTTGCTAGTGCCTGATTACATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAACGGTGGCTGAATAACATG CCATTACTCCAGACAACCAACTACATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACTATAGTAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACCGTATTG TTATATCATGACAGCAATGGTTCACAAGATGGTATT-CTAGTAGTGACGCTGGGGATATT TGGGGCAACACCTATGGATCAAGTTGAAGAAGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACACATAACAAATCACCGTGGGTTCATAAAAGATTCAATAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAAACAAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAAACCTACCCTATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGGGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTGGATCCAAGCATTGACCTTCAACTTAACAT ATCATTTACACACGGTCCAGTTATACTGAATGGAGACGGTATGGATTATTATGAAAGCTC ACTTTCGGACTCCGGATGGCTTACCATTCCTCCCAAGAACGGAACAGTCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATCCCCCATGTGTTGACATTTGCGCC CAGGGGATCAAGTGGAAATTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTGACTGAGTCTAATTTAGTGGTGTTGACTACACAGAATTTTAGATATGTCATAGC CACATATGATATATCTCGGGGCGATCATGCAATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG AATTGAATGTTTTGTGTGGGATGACGATTTGTGGTGTCACCAATTTTACCGATTTGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAAACCTTGACAGTATGATGATACACATCTCAATTGGACTTAGATATGATGACT GAGGTGAGAAATCCCTTACCGACGATTGAATTAAACCATCTCTAGCATTATAAA------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Wolf_Wa_Abruzzo_2013 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAGTCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAGAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAAGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGATTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGTTTTATAAAAGATTCGGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCACTGACCGTCAACTTAACAT ATCATTTACGTACGGTCCGGTTATACTGAATGGAAATGGTATGGATTATTATGAAAGCCC ACTTATGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCTAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATTCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGATCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Wolf_Wb_Abruzzo_2013 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------GTCCTTCTC ATCCTACTGGTTGGAATCCTGGCCTTGCTTGCTATCACTGGAGTTCGATTTCACCAGGTA TCAATTAGCAATATGGAATTTAGCAGATTGTTGAAAGAGGATATGGAGAAGTCAGATGCC GTACATCACCAAGTCATAGATGTCTTGACACCGCTCTTCAAAATTATTGGAGATGAGATT GGGTTACGGTTGCCACAAAAACTAAACGAGATCAAACAATTTATCCTTCAGAAGACTAAC TTCTTCAATCCGAACAGGGAATTCGACTTCCGCGATCTCCACTGGTGCATTAATCCGCCT AGTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAAGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGATTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGTTTTATAAAAGATTCGGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCACTGACCGTCAACTTAACAT ATCATTTACGTACGGTCCGGTTATACTGAATGGAAATGGTATGGATTATTATGAAAGCCC ACTTATGGACTCCGGATGGCTTACCATTCCTCCTAAGAATGGAACAATTCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATCCCTCATGTGTTGTCATTTGCGCC CAGGGAATCAAGTGGAAACTGTTATTTACCTATTCAAACATCCCAGATTATGGATAAAGA TGTCCTTACTGAGTCTAATTTAGTTGTGTTGCCTACACAGAATTTTAGATATGTCATAGC AACATATGATATATCCCGAAACGATCATGCGATTGTTTATTATGTTTATGACCCAATTCG GACGATTTCTTATACGTACCCATTTAGACTAACTACCAAGGGTAGATCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGACGACCTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCACCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCCTGTAA CCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Wolf_W1_Abruzzo_2013 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -GTAAGATCAAAGTGAATTTTACTAGTTACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAAGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGATTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGTTTTATAAAAGATTCGGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCACTGACCGTCAACTTAACAT ATCATTTACGTACGGTCCGGTTATACTGAATGGAAATGGTATGGATTATTATGAAAGCCC ACT--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Wolf_W2_Abruzzo_2013 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------TACTGTGATACAATTGGGATCAGAAAATCCATT GCATTGGCAGCAAATCCCATCCTTTTGTCAGCACTCTCCGGAGGCAGAGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAATTGGCAAATCTTTCCCCCTATCAGTA TCATTATCCATGTCTTTGATCTCAAGAACATCAGAGATAATCAATATGCTGACCTCTATC TCAGACGGAGTGTATGGTAAAACTTATTTGCTAGTGCCTGATTATATTGAAGGGGAGTTC GACACGCAAAAGATTCGAGTCTTTGAGATAGGGTTCATCAAAAGGTGGCTGAATGACATG CCATTATTCCAGACAACCAACTATATGATCCTCCCGGAGAATTCTAAAACCAAAGTATGT ACTATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATATCATGACAGCAATGATTCACAAGATGGTATT-CTAGTAGTGACGCTGGGAATCTT TGGGGCAACACCTATGGATCAAGTCGAAGAGGTGATACCTGTCGCTCACCCATCAGTAGA AAAAATACATATAACAAATCACCGTGGTTTTATAAAAGATTCGGTAGCAACCTGGATGGT GCCTGCATTGGTCTCTGAGAACCTAGAGGAACAAAAAAATTGTCTGGAGTCGGCTTGTCA AAGAAAATCCTACCCTATGTGCAACCAAACATCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACGTTACATCTAGATGCAAGCACTGACCGTCAACTTAACAT ATCATTTACGTACGGTCCGGTTATAC---------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain MD77, from dog in Japan AB286953 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTACAAGGACAATGCAAGAGCCAATCCATCCAAGCTG TCCCTAGTGACAGAAGAGCATGGGGGCAGGAGACCACCCTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCTTGCTTTCTATCACTGGAATTCGATTTCACAAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACACTACCAAGTCATAGATGTCTTCACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGGGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGATCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGGGTAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGAGATAATCACTTTGCTGACCGCTACC TCAGCCGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAAATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACCGTATTA TTAGACCATGACAGCAGGGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGGATATT TGGGGCAACACCTATGGATCAGGAAGAGGAAGTGATACCTGTCTCTCACCCATCAATGGA GAAAATCCATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCTAAAAACGGAACAATCTTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATACCCCAGGTATTAACATTTGCGCC CAGGGAATCAGGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATCGAGTCCAATTTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGATATATCCCGAAATGATCATGCGATTGTTTATTATGTTTATGACCCATTCCG GACGATTTTTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGATAATTTGTGGTGTCACCAATTTTACAGATACGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA TCGTTCAAAACCTTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain Indian, from dog in India AM903376 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------------------------AACAATGCTCTCC TACCAGGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATCCATCCAAGCTG TCCCTAGTGACAGAAGAGCATGGGGGCAGGAGACCACCCTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCTTGCTTTCTATCACTGGAATTCGATTTCACAAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGGGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGGTCAAGGTGAATTTTACTAATTACTGCGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGAGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGTGATAATCAATATGCTGACCGCTATC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAAATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACTGTATTA TTATATCATGACAGCAGTGGTTCACAAGAATGTATT-CTAGTAGGGACACTGGGGATATT TTGGGCAACACCTATGGATCACATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAGAATACATATAACAAACCACCGGGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAAGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTACACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCCAAAAACGGAACAATCTCTGGATTGAT AAACAAAGCAGGTAGAGGAGACCAGTTCACTGTACTCCCCCATGTGTTAACATTTGCGCC CAGGGAATCAAGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATTGAGTCCAATATAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGACATATCACGAAGTGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATAACAATTTGTGGTGTCACCAATTTTACAGATTCGAGGC TGACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGACAAATCGATGAATCCGCGGCCCCTGGGCCCGATAACCCGCTACA GT---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 98-2655, from raccoon in USA AY548109 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAGGACAAGGTGGGTGCCTTCTATAAGGATAATGCAAGAGCCAATCCATCCAAGCTG TCCCTAGTGACAGAAGAGCATGGGGGCAGGAGACCACCCTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCTTGCTTTCTATCACTGGAGTTCGATTTCACAAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGGGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGGTCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGAGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGTGATAATCAATATGCTGACCGCTATC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAGATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATACCATGACAGCAGGGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGAATATT TGGGGCAACACCTATGGATCACATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAAAATACATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGTTTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCTAAAAACGGAACAATCCTTGGATTGAT AAACAAAGCAGGTAGAGGAGACCAGTTCACTGTAATACCCCATGTATTAACATTTGCACC CAGGGAATCAGGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATCGAGTCCAATTTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGATATATCCCGAAATGATCATGCGATTGTTTATTATGTTTATGACCCATTCCG GACGATTTTTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGATAATTTGTGGTGTCACCAATTTTACAGATACGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 98-2666-2, from raccoon in USA AY548111 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAGGACAAGGTGGGTGCCTTCTACAAGGATAATGCAAGAGCCAATCCATCCAAGCTG TCCCTAGTGACAGAAGAGCATGGGGGCAGGAGACCACCCTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCTTGCTTTCTATCACTGGAGTTCGATTTCACAAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGGGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCACCT AGTAAGGTCAAGGTGAATTTTACTAATTACTGTGATACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGAGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGTGATAATCAATATGCTGACCGCTATC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAGATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGCGAGTTGACACTGGCTTCCTTGTGTGTAGATGAGAGCACTGTATTA TTATACCATGACAGCAGGGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGAATATT TGGGGCAACACCTATGGATCACATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAAAATACATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTTGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGTTTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCTAAAAACGGAACAATCCTTGGATTGAT AAACAAAGCAGGTAGAGGAGACCAGTTCACTGTAATACCCCATGTATTAACATTTGCACC CAGGGAATCAGGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATCGAGTCCAATTTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGATATATCCCGAAATGATCATGCGATTGTTTATTATGTTTATGACCCATTCCG GACGATTTTTTATACGTACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGATAATTTGTGGTGTCACCAATTTTACAGATACGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain 16, from dog in China GQ332531 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTACAAGGACAATGCAAGAGCCAATTCATCCAAGCTG TCCCCAGTGACAGAAGAGCATGGGGGCAGGAGACCACCTTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCCTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATGGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGAGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGGTCAAGGTGAATTTTACAAATTACTGTGAGACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGGGCAGGAGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGAGATAATCAATATGCTGACCGCTACC TCAGACGGCGTGTATGGCAAAACTTACTTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAAATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACTGTATTA TTATACCATGACAGCAGGGGTTCACAAGGTGGTATT-CTAGTAGTGACACTGGGGATATT TGGGGCAACACCTATGGATCATATTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAAAATACATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAGAGGTTGGCTGGAGTCAGCTTGTCA AAGAAAACCGTACCCCATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCTAAAAACGGAACAATCCTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTGATACCCCAAGTATTAACATTTGCGCC CAGGGAATCATGTGGAAATTGTTATTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATCGAGTCCAATGTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTACGATATATCACGAAATGATCATGCGATTGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGATAATTTGTGGTGTCACCAATTTTACAGATACGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------- >CDV strain CDV-GZ1, from dog in China HQ403645 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------ATGCTCTCC TACCAAGACAAGGTGGGTGCCTTCTACAAGGACAATGCAAGAGCCAATTCATCCAAGCTG TCCCTAGTGACAGAAGAGCATGGGGGCAGGAGACCACCTTATTTGTTGTTTGTCCTTCTC ATCCTATTGGTTGGAATCCTGGCCCTGCTTGCTATCACTGGAGTTCGATTTCACCAAGTA TCAACTAGCAATATTGAATTTAGCAGATTGCTGAAAGAGGATATGGAGAAATCAGAGGCC GTACATCATCAAGTCATAGATGTCTTGACACCGCTCTTCAAGATTATTGGGGATGAGATT GGGTTACGGTTGCCACAAAAGCTAAACGAGATCAAACAATTTATCCTTCAAAAGACAAAT TTCTTCAATCCGAACAGAGAATTCGATTTCCGCGATCTCCACTGGTGCATTAACCCGCCT AGTAAGGTCAAGGTGAATTTTACAAATTACTGTGAGACAATTGGGATCAGAAAATCTATT GCATCGGCAGCAAATCCCATCCTTTTATCAGCCCTCTCTGGGGGTAGGGGTGACATATTC CCACCATACAGATGCAGTGGAGCTACTACTTCAGTAGGCAAAGTTTTCCCCCTATCAGTC TCGTTATCCATGTCTTTGATCTCAAGAACCTCAGAGATAATCAATATGCTGACCGCTACC TCAGACGGCGTGTATGGCAAAACTTACCTGCTAGTGCCTGATGATATAGAACGGGAGTTC GACACTCAAGAGATTCGAGTCTTTGAAATAGGGTTCATTAAAAGGTGGCTGAATGACATG CCATTACTCCAAACAACCAACTATATGGTCCTCCCGGAGAATTCCAAAGCCAAGGTATGT ACCATAGCAGTGGGTGAGTTGACACTGGCTTCCTTGTGTGTAGAAGAGAGCACTGTATTA TTAGACCATGACAGCAGGGGTTCACAAGATGGTATT-CTAGTAGTGACACTGGGGATATT TGGGGCAACACCTATGGATCATGTTGAGGAAGTGATACCTGTCGCTCACCCATCAATGGA GAAAATACATATAACAAACCACCGTGGTTTTATAAAAGATTCAATTGCAACCTGGATGGT GCCTGCCCTGGCCTCTGAGAAACAAGAAGAACAAAAAGGTTGTCTGGAGTCAGCTTGTCA AAGAAAAACCTACCCCATGTGCAACCAAACGTCATGGGAACCCTTCGGAGGAGGACAGTT GCCATCTTATGGGCGGTTGACATTACCTCTAGATGCAAGTGTTGACCTTCAACTTAACAT ATCGTTCACATACGGTCCGGTTATACTGAATGGAGATGGTATGGATTATTATGAAAGCCC ACTTTTGAACTCCGGATGGCTTACCATTCCTCCTAAAAACGGAACAATCTTTGGATTGAT AAACAAAGCAAGTAGAGGAGACCAGTTCACTGTAATACCCCAGGTATTAACATTTGCGCC CAGGGAATCAGGTGGAAATTGTTCTTTACCTATTCAAACATCTCAAATTATAGATAGAGA TGTCCTCATCGAGTCCAATGTAGTGGTGTTGCCTACACAGAGTTTTAGATATGTCATAGC AACGTATGATATATCACGAAATGATCATGCGATCGTTTATTATGTTTATGACCCAATCCG GACGATTTCTTATACGCACCCATTTAGACTAACTACCAAGGGTAGACCTGATTTCCTAAG GATTGAATGTTTTGTGTGGGATGATAATTTGTGGTGTCACCAATTTTACAGATACGAGGC TAACATCGCCAACTCTACAACCAGTGTTGAGAATTTAGTCCGTATAAGATTCTCATGTAA CCGTTCAAATCCCTGA-------------------------------------------- ------------------------------------------------------------ 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