Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
0610011I04Rik	View	View		-	-	0.30	0.60	0.54			RIKEN CDNA 0610011I04 GENE	474	509	416	1377	474	789	445	826	chr6:48771095-48776634	1423909_at
0610037M15Rik	View	View		-	-	0.08	0.29	0.33			RIKEN CDNA 0610037M15 GENE	109	265	134	1597	109	371	122	368	chr17:35033315-35038106	1431008_at
0610038B21Rik	View	View		-	-	8.09	-	-			RIKEN CDNA 0610038B21 GENE	233	218	275	34	233	105	254	44	chr8:80413854-80414650	1430930_at
1110002B05Rik	View	View		-	0.41	-	0.45	0.37			RIKEN CDNA 1110002B05 GENE	3353	8107	3568	4274	3353	7436	3461	9405	chr12:55567027-55578155	1448388_a_at
1110003E01Rik	View	View		749	-	0.46	0.53	0.55			RIKEN CDNA 1110003E01 GENE	2043	2194	2507	5490	2043	3827	2275	4119	chr5:65727699-65772073	1416768_at, 1444100_at
1110020G09Rik	View	View		245	2.37	3.96	2.24	3.33			RIKEN CDNA 1110020G09 GENE	6341	2679	5332	1347	6341	2832	5837	1753	chr15:8998142-9037020	1437287_at, 1453422_a_at
1110051B16Rik	View	View		-	3.25	2.37	9.70	5.78			RIKEN CDNA 1110051B16 GENE	1708	526	246	104	1708	176	977	169	chr14:24816189-24822578	1445710_x_at, 1429099_at
1300007C21Rik	-	-		-	-	-	0.33	0.07			RIKEN CDNA 1300007C21 GENE	836	752	8	20	836	2519	422	5881	chr18	1431213_a_at
1300010M03Rik	View	View		253	-	-	0.22	-			RIKEN CDNA 1300010M03 GENE	367	289	1509	1503	367	1639	938	1650	chr11:100912412-100935933	1424159_at
1500001H12Rik	View	View		298	-	-	0.14	-			RIKEN CDNA 1500001H12 GENE	174	151	1110	1028	174	1271	642	1222	chr7:141277769-141280740	1421348_a_at, 1421349_x_at
1500016O10Rik	View	View		236	-	2.18	2.31	1.94			RIKEN CDNA 1500016O10 GENE	20372	17294	15926	7304	20372	8827	18149	9376	chr7:126588816-126621362	1438641_x_at, 1452807_s_at, 1454209_at, 1452806_at
1700027L20Rik	View	View		-	-	19.21	-	-			RIKEN CDNA 1700027L20 GENE	99	123	269	14	99	72	184	55	chr1:89017836-89019574	1429647_at
1700056N10Rik	View	View		430	-	-	0.16	-			RIKEN CDNA 1700056N10 GENE	19	19	93	86	19	122	56	109	chr16:16961083-16962674	1432356_at
1810009A15Rik	View	View		783	-	2.35	1.89	2.64			RIKEN CDNA 1810009A15 GENE	13339	13771	11847	5038	13339	7056	12593	4767	chr19:8955948-8957785	1417886_at, 1457083_at
1810041L15Rik	View	View		227	-	0.34	0.40	0.46			RIKEN CDNA 1810041L15 GENE	2009	2223	2129	6342	2009	5030	2069	4479	chr15:84207813-84274863	1455515_at, 1429440_at
2310026E23Rik	View	View		481	-	-	0.17	0.15			RIKEN CDNA 2310026E23 GENE	102	222	113	159	102	584	108	702	chr4:110912938-110957857	1435351_at
2310030G06Rik	View	View		743	-	-	0.18	-			RIKEN CDNA 2310030G06 GENE	27	45	100	115	27	153	64	174	chr9:50491921-50498751	1449357_at
2310068G24Rik	View	View		-	-	-	0.26	-			RIKEN CDNA 2310068G24 GENE	302	396	264	206	302	1155	283	386	chr12:82162308-82163919	1433023_at
2510049J12Rik	View	View		-	-	5.81	-	8.24			RIKEN CDNA 2510049J12 GENE	380	219	180	31	380	224	280	34	chr6:115549164-115558095	1440916_at
2610034M16Rik	View	View		881	1.45	20.97	10.19	30.01			RIKEN CDNA 2610034M16 GENE	4167	2883	3754	179	4167	409	3961	132	chr17:58564413-58660601	1425408_a_at
2610204L23Rik	View	View		238	-	-	0.15	-			RIKEN CDNA 2610204L23 GENE	205	238	957	1055	205	1323	581	1119	chr11:105979424-106032434	1424636_at
2610528A11Rik	View	View		356	2.22	-	5.61	-			RIKEN CDNA 2610528A11 GENE	275	124	55	50	275	49	165	52	chr14:36013533-36025762	1435639_at
2810407C02Rik	View	View		2435	-	-	0.49	-			RIKEN CDNA 2810407C02 GENE	2714	2628	4691	5062	2714	5533	3703	5160	chr3:58664666-58678220	1453726_s_at
2900019G14Rik	View	View		-	-	-	0.20	-			RIKEN CDNA 2900019G14 GENE	33	49	86	151	33	169	60	181	chr2:102585167-102589606	1459014_at
2900046D03Rik	View	View		-	-	7.17	2.58	4.76			RIKEN CDNA 2900046D03 GENE	1906	1425	1333	186	1906	740	1620	340	chr7:126590914-126591029	1444230_at
2900057B20Rik	View	View		1113	-	-	6.16	-			RIKEN CDNA 2900057B20 GENE	277	600	91	51	277	45	184	46	chr18:76216922-76223836	1431631_at
2900097C17Rik	View	View		270	-	-	0.07	0.21			RIKEN CDNA 2900097C17 GENE	144	114	420	430	144	1960	282	1319	chr2:156083932-156084270	1432646_a_at
3010001F23Rik	View	View		-	3.95	5.28	12.15	8.35			RIKEN CDNA 3010001F23 GENE	1106	280	897	170	1106	91	1002	120	chrX:147709288-147757414	1457010_at
3110001A13Rik	View	View		498	-	3.04	0.36	-			RIKEN CDNA 3110001A13 GENE	502	297	1094	360	502	1382	798	528	chr2:3630730-3699406	1416893_at
3632451O06Rik	View	View		201	-	3.98	-	-			RIKEN CDNA 3632451O06 GENE	227	270	1043	262	227	257	635	233	chr14:48604299-48696196	1450770_at
3732412D22Rik	View	View		-	-	-	0.15	-			RIKEN CDNA 3732412D22 GENE	22	82	70	87	22	149	46	169	chr5:67248202-67325938	1440776_at
4631423F02Rik	View	View		-	-	0.12	-	-			RIKEN CDNA 4631423F02 GENE	39	24	94	757	39	32	67	236	chr1:93181479-93192810	1452707_at
4631427C17Rik	View	View		355	-	-	0.16	0.35			RIKEN CDNA 4631427C17 GENE	158	194	424	587	158	961	291	836	chr6:29718543-29862319	1419730_at
4632412N22Rik	View	View		-	-	0.03	-	-			RIKEN CDNA 4632412N22 GENE	9	12	9	261	9	15	9	13	chr17:71590022-71634526	1440898_at
4732415M23Rik	View	View		-	-	-	0.10	-			RIKEN CDNA 4732415M23 GENE	12	20	96	43	12	115	54	90	chr8:126098974-126108134	1435365_at
4833428M15Rik	View	View		2270	-	-	0.08	-			RIKEN CDNA 4833428M15 GENE	8	17	81	86	8	100	45	66	chr14:96967846-96969866	1431471_at
4921509F24Rik	View	View		-	-	10.30	6.14	26.20			RIKEN CDNA 4921509F24 GENE	215	170	309	30	215	35	262	10	chr9:26567476-26610101	1453143_at
4921511K06Rik	View	View		280	0.55	0.45	0.16	0.21	Link		RIKEN CDNA 4921511K06 GENE	1966	3563	2044	4537	1966	12675	2005	9656	chr6:29349153-29376962	1424699_at
4930418G15Rik	View	View		305	-	7.54	2.13	4.17			RIKEN CDNA 4930418G15 GENE	459	297	490	65	459	215	475	114	chr1:9953846-9994350	1430283_s_at, 1424977_at
4930430E16Rik	View	View		1473	-	3.68	-	1.93			RIKEN CDNA 4930430E16 GENE	1829	1864	2037	553	1829	1785	1933	1000	chr11:22907531-22930788	1443569_at, 1451653_a_at
4930519N16Rik	View	View		359	-	5.61	-	11.43			RIKEN CDNA 4930519N16 GENE	6736	6244	6660	1188	6736	5389	6698	586	chr13:51183519-51187684	1429133_at
4930535I16Rik	View	View		537	-	-	0.18	-			RIKEN CDNA 4930535I16 GENE	24	33	46	53	24	137	35	42	chr4:123419807-123420325	1430608_at
4930554H23Rik	View	View		-	0.09	-	0.12	0.24			RIKEN CDNA 4930554H23 GENE	82	880	85	64	82	681	84	357	chr7:63223642-63323476	1454020_at
4932417H02Rik	View	View		-	-	-	0.20	-			RIKEN CDNA 4932417H02 GENE	25	33	120	91	25	124	73	116	chr11:119419788-119715680	1458068_at
4933409K07Rik	View	View		-	0.09	-	-	-			RIKEN CDNA 4933409K07 GENE	22	243	85	48	22	46	54	59	chr4:42479920-42484753	1447937_a_at
4933437N03Rik	View	View		-	-	0.16	-	0.04			RIKEN CDNA 4933437N03 GENE	78	122	53	338	78	117	66	1670	chr4:62867719-62880377	1430207_at
4933439C20Rik	View	View		-	5.23	-	-	-			RIKEN CDNA 4933439C20 GENE	947	181	899	742	947	1286	923	751	chr11:3024018-3031950	1429452_x_at, 1453144_at, 1453145_at
5430405N12Rik	View	View		516	0.30	-	-	-			RIKEN CDNA 5430405N12 GENE	411	1384	34	32	411	351	223	233	chr14:11032440-11034160	1429691_at
5430420E18Rik	View	View		2077	-	5.59	-	-			RIKEN CDNA 5430420E18 GENE	12	22	151	27	12	16	82	8	chr14:60173225-60175199	1429823_at
5830408C22Rik	View	View		-	3.40	-	17.47	-			RIKEN CDNA 5830408C22 GENE	262	77	138	143	262	15	200	9	chr8:26572543-26575531	1430159_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
6030439D06Rik	View	View		440	-	0.09	-	-			RIKEN CDNA 6030439D06 GENE	59	34	16	177	59	11	38	58	chr8:118573701-118578294	1443078_at
6330407D12Rik	View	View		299	-	2.61	3.37	3.46	Link		RIKEN CDNA 6330407D12 GENE	9089	9261	9493	3642	9089	2698	9291	2689	chr6:49248939-49271167	1434313_at
6330442E10Rik	View	View		1048	-	4.25	1.54	-			RIKEN CDNA 6330442E10 GENE	1743	1483	3357	789	1743	1130	2550	1326	chr12:79880637-79926177	1457254_x_at, 1454632_at
6330442E10Rik	View	View		1048	-	4.03	1.95	2.05			RIKEN CDNA 6330442E10 GENE	2677	1995	4047	1004	2677	1373	3362	1640	chr12:79880637-79926177	1454632_at
6430548M08Rik	View	View		-	1.41	3.16	1.85	2.39			RIKEN CDNA 6430548M08 GENE	2036	1448	2256	715	2036	1101	2146	897	chr8:123000143-123051275	1425637_at
6430562O15Rik	View	View		-	2.90	-	5.55	-			RIKEN CDNA 6430562O15 GENE	322	111	53	58	322	58	188	37	chr13:100508767-100513033	1456982_at
6620401M08Rik	View	View		436	0.33	0.66	0.28	0.36			RIKEN CDNA 6620401M08 GENE	1424	4298	1506	2299	1424	5086	1465	4099	chr7:51865572-51874036	1429146_at, 1453049_at
7530404M11Rik	View	View		-	0.62	0.42	0.18	0.24	Link		RIKEN CDNA 7530404M11 GENE	1703	2764	2043	4892	1703	9234	1873	7875	chr3:104900227-104901988	1442160_at
9030218A15Rik	View	View		1517	-	-	0.16	-			RIKEN CDNA 9030218A15 GENE	39	38	145	134	39	247	92	108	chr3:86448414-86449506	1432790_at
9030407P20Rik	View	View		-	-	-	0.07	-			RIKEN CDNA 9030407P20 GENE	12	23	105	151	12	162	59	182	chr7:120464588-120468669	1454056_at
9130230N09Rik	View	View		625	-	0.17	-	-			RIKEN CDNA 9130230N09 GENE	36	22	28	168	36	85	32	55	chr11:22760361-22761256	1437980_at
9330168M11Rik	View	View		-	2.27	167.32	96.90	325.09			RIKEN CDNA 9330168M11 GENE	3973	1751	3179	19	3973	41	3576	11	chrX:145803307-145806370	1458418_at
9930021J17Rik	View	View		782	-	5.26	12.52	10.20			RIKEN CDNA 9930021J17 GENE	526	241	473	90	526	42	500	49	chr3:85745993-85816368	1437371_at
A230097K15Rik	View	View		-	0.23	-	0.13	0.14			RIKEN CDNA A230097K15 GENE	158	681	179	266	158	1227	169	1237	chr5:101086598-101139403	1454799_at
A2m	View	View		2026	0.45	0.28	0.65	2.61			ALPHA-2-MACROGLOBULIN	478	1055	410	1475	478	737	444	170	chr6:121601908-121644181	1434719_at
A330094K24Rik	View	View		-	1.55	9.28	3.61	9.01			RIKEN CDNA A330094K24 GENE	1266	819	1039	112	1266	351	1153	128	chr18:77933759-77937546	1460479_at
A430060F13Rik	View	View		-	-	-	0.09	-			RIKEN CDNA A430060F13 GENE	14	30	42	67	14	153	28	76	chr11:94573144-94577001	1437361_at
A730062M13Rik	View	View		667	-	-	0.19	-			RIKEN CDNA A730062M13 GENE	82	102	89	221	82	443	86	263	chr9:72666784-72668693	1446810_at
A830021M18	-	-		-	-	-	0.16	0.24			HYPOTHETICAL PROTEIN A830021M18	160	304	47	141	160	1000	104	427	chr15	1445721_at
A930004D18Rik	-	-		-	2.13	51.61	2.56	4.64			RIKEN CDNA A930004D18 GENE	1295	608	1445	28	1295	506	1370	295	chr2	1429791_at, 1440683_at
A930009A15Rik	View	View		-	0.11	0.07	0.07	0.06			RIKEN CDNA A930009A15 GENE	96	844	209	3124	96	1322	153	2408	chr10:114974096-114986558	1453398_at
A930015D22Rik	View	View		1219	-	6.18	-	3.18			RIKEN CDNA A930015D22 GENE	1328	1482	1507	244	1328	1591	1418	446	chr2:121142621-121148222	1426035_at
A930018M24Rik	View	View		-	-	0.30	0.05	0.09	Link		HYPOTHETICAL PROTEIN 9330167E06	136	88	286	960	136	2495	211	2223	chr14:49816905-49817486	1439143_at
A930028C08Rik	View	View		-	2.77	-	114.00	-			RIKEN CDNA A930028C08 GENE	1026	370	11	5	1026	9	519	8	chr4:148191714-148203128	1430945_at
A930036K24Rik	View	View		449	1.65	70.03	20.28	51.09			RIKEN CDNA A930036K24 GENE	2657	1606	8684	124	2657	131	5671	111	chr9:107538207-107539380	1431174_at
Aadacl1	View	View		809	-	-	0.20	-			ARYLACETAMIDE DEACETYLASE-LIKE 1	92	118	502	504	92	465	297	468	chr3:27374073-27475525	1435135_at
Abca13	View	View		-	-	10.82	9.47	12.27			ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 13	625	650	552	51	625	66	589	48	chr11:9091969-9583635	1446715_at, 1440370_at
Abca4	View	View		350	-	4.34	1.88	-	Link		ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 4	10378	8800	4388	1011	10378	5527	7383	2445	chr3:122036482-122172083	1449588_at
Abi3	View	View		206	-	0.39	0.10	0.06			ABI GENE FAMILY, MEMBER 3	38	185	85	219	38	391	62	1014	chr11:95646162-95658250	1452928_at
Acbd6	View	View		2732	0.54	0.35	0.21	0.31			ACYL-COENZYME A BINDING DOMAIN CONTAINING 6	641	1187	742	2146	641	3089	692	2261	chr1:157320337-157449450	1452601_a_at, 1453199_at
Accn4	View	View		1792	-	0.32	0.06	0.15			AMILORIDE-SENSITIVE CATION CHANNEL 4, PITUITARY	125	113	566	1780	125	2058	346	2298	chr1:75333847-75357488	1437091_at
Acoxl	View	View		-	-	-	13.55	-			ACYL-COENZYME A OXIDASE-LIKE	149	78	30	10	149	11	90	12	chr2:127546069-127815314	1460470_at
Actb	View	View		-	-	-	0.29	-			ACTIN, BETA, CYTOPLASMIC	1387	1612	4491	4187	1387	4834	2939	4694	chr5:143168256-143171864	1419734_at
Acvr2b	View	View		-	-	-	3.20	-			ACTIVIN RECEPTOR IIB	1131	912	528	353	1131	353	830	332	chr9:119251215-119282213	1439856_at
Adcy1	View	View		441	1.52	1.65	3.85	2.98			ADENYLATE CYCLASE 1	7016	4628	3998	2428	7016	1820	5507	1848	chr11:6963492-7078509	1456487_at
Adipor1	View	View		-	-	3.46	2.62	3.01			ADIPONECTIN RECEPTOR 1	10985	10322	10259	2969	10985	4198	10622	3533	chr1:136231891-136248748	1439017_x_at, 1424312_at, 1451311_a_at
Adrb1	View	View		1023	0.28	0.57	0.15	0.19	Link		ADRENERGIC RECEPTOR, BETA 1	1385	5018	1561	2743	1385	9023	1473	7919	chr19:56775622-56777022	1423420_at
Adrb2	View	View		312	-	-	0.11	0.02			ADRENERGIC RECEPTOR, BETA 2	31	22	5	19	31	270	18	783	chr18:62303865-62305121	1437302_at
Agpat3	View	View		-	-	2.51	1.65	1.92			1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 3	6827	6210	7234	2887	6827	4134	7031	3670	chr10:77674692-77754829	1433819_s_at
Agr2	View	View		-	-	5.08	-	-			ANTERIOR GRADIENT 2 (XENOPUS LAEVIS)	36	90	132	26	36	20	84	26	chr12:36503173-36514346	1419268_at
AI847670	View	View		265	0.22	-	-	-			EXPRESSED SEQUENCE AI847670	385	1756	411	411	385	498	398	423	chr5:20936992-20993948	1434266_at
AI852064	-	-		-	-	3.95	4.39	6.00			EXPRESSED SEQUENCE AI852064	9552	9923	6366	1610	9552	2178	7959	1327	chr2	1440838_at
Aipl1	View	View		-	-	-	0.28	-	Link		ARYL HYDROCARBON RECEPTOR-INTERACTING PROTEIN-LIKE 1	4572	3537	7361	8565	4572	16164	5967	7449	chr11:71845360-71853653	1425590_s_at
Ak3l1	View	View		775	-	-	0.17	-			ADENYLATE KINASE 3 ALPHA-LIKE 1	25	67	163	136	25	144	94	104	chr2:72434775-72435446	1421829_at
Akp2	View	View		-	1.24	5.90	3.94	14.82			ALKALINE PHOSPHATASE 2, LIVER	2794	2259	1741	295	2794	710	2268	153	chr4:137013809-137068395	1423611_at
Aldh2	View	View		249	-	-	0.20	-			ALDEHYDE DEHYDROGENASE 2, MITOCHONDRIAL	122	117	598	623	122	622	360	536	chr5:121828319-121854203	1448143_at
Amigo1	View	View		1765	-	-	0.09	-			ADHESION MOLECULE WITH IG LIKE DOMAIN 1	20	116	124	168	20	220	72	239	chr3:108314391-108319832	1425851_a_at
Ampd2	View	View		256	0.67	0.50	0.28	0.35	Link		ADENOSINE MONOPHOSPHATE DEAMINASE 2 (ISOFORM L)	865	1295	707	1428	865	3056	786	2276	chr3:108202971-108209197	1426757_at, 1438941_x_at
Ankrd11	View	View		-	-	-	0.16	-			ANKYRIN REPEAT DOMAIN 11	165	242	762	748	165	1043	464	904	chr8:125770244-125786243	1437633_at
Ankrd33	View	View		448	-	14.41	-	-			ANKYRIN REPEAT DOMAIN 33	5830	7952	4019	279	5830	8037	4925	2894	chr15:100943789-100948062	1451636_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Anxa2	View	View		287	-	0.33	-	-			ANNEXIN A2	607	627	515	1582	607	595	561	462	chr9:69252847-69290959	1419091_a_at
Aof1	View	View		247	0.12	-	-	-			AMINE OXIDASE, FLAVIN CONTAINING 1	487	4131	568	528	487	589	528	459	chr13:47054541-47095585	1433649_at
Ap2a2	View	View		-	1.30	1.36	2.36	2.17			ADAPTOR PROTEIN COMPLEX AP-2, ALPHA 2 SUBUNIT	5871	4508	4568	3366	5871	2488	5220	2405	chr7:141413558-141484333	1435869_s_at, 1455482_at
Ap2b1	View	View		465	-	-	0.21	-			ADAPTOR-RELATED PROTEIN COMPLEX 2, BETA 1 SUBUNIT	468	591	1947	1530	468	2280	1208	1911	chr11:82933040-83221234	1452292_at
Aplp2	View	View		896	-	-	0.32	-			AMYLOID BETA (A4) PRECURSOR-LIKE PROTEIN 2	2264	1811	6545	5295	2264	7164	4405	6008	chr9:30899122-30961358	1421889_a_at
Apobec2	View	View		-	6.14	0.12	1.83	-			APOLIPOPROTEIN B EDITING COMPLEX 2	706	115	161	1315	706	385	434	872	chr17:47884798-47898295	1417889_at
Aqp1	View	View		240	16.32	42.55	15.49	49.32			AQUAPORIN 1	1828	112	2808	66	1828	118	2318	47	chr6:55266010-55278133	1416203_at
Arg2	View	View		-	-	23.81	2.59	10.32			ARGINASE TYPE II	733	623	857	36	733	283	795	77	chr12:80049664-80075138	1418847_at, 1438841_s_at
Arhgap10	View	View		-	-	5.12	-	-			RHO GTPASE ACTIVATING PROTEIN 10	60	67	128	25	60	81	94	41	chr8:80146991-80413860	1459609_at, 1426027_a_at
Arhgdib	View	View		291	0.12	-	0.20	-			RHO, GDP DISSOCIATION INHIBITOR (GDI) BETA	321	2763	128	182	321	1640	225	421	chr6:136887905-136905913	1426454_at
Arl13b	View	View		287	1.62	2.45	5.41	4.27			ADP-RIBOSYLATION FACTOR-LIKE 13B	1142	703	908	370	1142	211	1025	240	chr16:62735941-62789253	1437021_at
Arl2bp	View	View		351	-	-	0.11	-			ADP-RIBOSYLATION FACTOR-LIKE 2 BINDING PROTEIN	291	327	2086	2250	291	2674	1189	2332	chr8:97555780-97563546	1429859_a_at
Arpc3	View	View		263	-	-	0.15	-			ACTIN RELATED PROTEIN 2/3 COMPLEX, SUBUNIT 3	386	379	2066	2379	386	2624	1226	2631	chr5:122657428-122666607	1448279_at
Arr3	View	View		266	0.59	2.02	0.22	-	Link		ARRESTIN 3, RETINAL	4257	7245	4313	2140	4257	19723	4285	5975	chrX:96808275-96821106	1450329_a_at, 1425232_x_at
Atp1a1	View	View		455	-	-	2.97	-			ATPASE, NA+/K+ TRANSPORTING, ALPHA 1 POLYPEPTIDE	5107	4775	3724	4313	5107	1717	4416	2566	chr3:101705286-101733745	1423653_at, 1451071_a_at
Atp1b2	View	View		286	-	0.67	0.46	0.56			ATPASE, NA+/K+ TRANSPORTING, BETA 2 POLYPEPTIDE	3952	3683	5863	8766	3952	8568	4908	8835	chr11:69415937-69422137	1422009_at
Atp6ap1	View	View		-	-	-	0.47	-			ATPASE, H+ TRANSPORTING, LYSOSOMAL (VACUOLAR PROTON PUMP), SUBUNIT 1	3582	3325	6146	7165	3582	7599	4864	7478	chrX:70549826-70557410	1449622_s_at
Atp6v0a1	View	View		640	-	-	0.17	-			ATPASE, H+ TRANSPORTING, LYSOSOMAL V0 SUBUNIT A1	294	206	857	1087	294	1775	576	1168	chr11:100825545-100879804	1425227_a_at
AW547186	View	View		861	0.13	-	-	-			EXPRESSED SEQUENCE AW547186	216	1716	371	387	216	310	294	306	chrX:137927784-138089716	1433854_at, 1454741_s_at
Azin1	View	View		261	-	-	0.15	-			ANTIZYME INHIBITOR 1	134	128	729	711	134	919	432	961	chr15:38432019-38463855	1430984_at
B230343A10Rik	View	View		-	-	3.10	-	-			RIKEN CDNA B230343A10 GENE	311	295	1301	420	311	355	806	317	chr11:67503316-67505125	1442019_at
B3gnt2	View	View		625	-	0.25	0.42	-			UDP-GLCNAC:BETAGAL BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1	163	141	314	1256	163	389	239	327	chr11:22734734-22760336	1420852_a_at, 1450026_a_at
B4galt2	View	View		471	1.97	13.75	2.25	10.76			COILED-COIL DOMAIN CONTAINING 24	1730	880	2227	162	1730	769	1979	184	chr4:117367196-117381401	1456905_at
Bach2	View	View		2021	0.26	0.30	0.40	0.33			BTB AND CNC HOMOLOGY 2	262	1010	246	821	262	653	254	778	chr4:32830238-32909894	1437667_a_at, 1441657_at
Bax	View	View		-	-	0.70	0.32	-			BCL2-ASSOCIATED X PROTEIN	374	355	931	1337	374	1159	653	1150	chr7:45329742-45334871	1416837_at
Bbs2	View	View		742	-	-	1.91	1.88		Link	BARDET-BIEDL SYNDROME 2 HOMOLOG (HUMAN)	1797	1301	1391	927	1797	941	1594	850	chr8:96957083-96987940	1424478_at
Bbs5	View	View		644	-	2.90	-	2.20		Link	BARDET-BIEDL SYNDROME 5 (HUMAN)	2866	2168	3735	1290	2866	2265	3301	1502	chr2:69448094-69468408	1429762_a_at
Bbs7	View	View		772	1.46	-	3.23	-			BARDET-BIEDL SYNDROME 7	3702	2531	1643	2007	3702	1147	2673	1329	chr3:36764695-36804897	1454684_at
BC038479	View	View		-	1.49	1.80	8.61	14.30			CDNA SEQUENCE BC038479	2212	1487	2794	1551	2212	257	2503	175	chr9:26512490-26555867	1433728_at, 1433727_at
BC060957	View	View		-	-	7.62	-	-			CDNA SEQUENCE BC060957	199	238	221	29	199	140	210	101	chr8:98423229-98448017	1436285_at
BC067067	View	View		-	-	0.03	-	0.13			CDNA SEQUENCE BC067067	39	64	40	1479	39	63	40	310	chr15:101621342-101630366	1436557_at
Bcl2l2	View	View		290	-	-	0.17	-			BCL2-LIKE 2	18	48	77	92	18	109	48	113	chr14:53837600-53842435	1430454_x_at
Bcl3	View	View		1145	-	0.13	-	-			B-CELL LEUKEMIA/LYMPHOMA 3	70	101	14	108	70	8	42	23	chr7:18966984-18981237	1418133_at
Birc4	View	View		246	-	2.25	-	-			BACULOVIRAL IAP REPEAT-CONTAINING 4	10381	11821	10853	4831	10381	9482	10617	7392	chrX:38315952-38350134	1437533_at
Bpnt1	View	View		-	-	-	0.32	0.48			BISPHOSPHATE 3'-NUCLEOTIDASE 1	476	455	712	870	476	1491	594	1227	chr1:187032947-187058557	1418764_a_at
Brcc3	View	View		287	-	-	0.05	-			BRCA1/BRCA2-CONTAINING COMPLEX, SUBUNIT 3	9	38	233	199	9	193	121	228	chrX:71669439-71706720	1426605_at
Bspry	View	View		608	-	-	0.08	0.14			B-BOX AND SPRY DOMAIN CONTAINING	46	163	53	46	46	543	50	355	chr4:61966428-61983659	1450131_a_at
Btg2	View	View		-	-	0.49	0.49	0.30			B-CELL TRANSLOCATION GENE 2, ANTI-PROLIFERATIVE	2896	3068	2854	5768	2896	5942	2875	9501	chr1:135891276-135895566	1416250_at
Bub1b	View	View		590	0.17	-	0.50	-			BUDDING UNINHIBITED BY BENZIMIDAZOLES 1 HOMOLOG, BETA (S. CEREVISIAE)	819	4852	134	11	819	1634	477	53	chr2:118289708-118333032	1416961_at, 1447363_s_at
Bzw1	View	View		-	-	-	0.24	-			BASIC LEUCINE ZIPPER AND W2 DOMAINS 1	441	374	1876	2383	441	1815	1159	2146	chr1:58337673-58351098	1450846_at
C130076O07Rik	View	View		375	-	-	0.17	0.38			RIKEN CDNA C030017F07 GENE	74	73	123	212	74	446	99	260	chr12:45199270-45469135	1442587_at, 1434709_at
C1ql3	View	View		1447	-	0.46	0.75	0.42			C1Q-LIKE 3	2381	2223	2905	6334	2381	3171	2643	6234	chr2:12921293-12929600	1451620_at
C230014O12Rik	View	View		1903	-	-	0.16	-			RIKEN CDNA C230014O12 GENE	22	42	51	10	22	137	37	66	chr2:33840298-33929738	1446877_at
C4b	View	View		-	-	0.22	-	-			COMPLEMENT COMPONENT 4B (CHILDO BLOOD GROUP)	622	763	230	1052	622	619	426	212	chr17:34336443-34351939	1418021_at
C530024P05Rik	View	View		245	-	-	0.32	-			RIKEN CDNA 4933413A10 GENE	646	707	651	698	646	2041	649	858	chr5:113731055-113850662	1435796_at
C79127	View	View		253	-	14.92	-	11.05			EXPRESSED SEQUENCE C79127	1507	1572	746	50	1507	810	1127	102	chr7:18435328-18438571	1442242_at
C81521	-	-		-	-	-	-	-			EXPRESSED SEQUENCE C81521									-	1441013_at
Cabp4	View	View		218	-	7.75	-	13.00		Link	CALCIUM BINDING PROTEIN 4	2606	2212	3216	415	2606	2168	2911	224	chr19:4135423-4139609	1425878_at, 1456936_at
Cabp5	View	View		446	-	-	0.29	-	Link		CALCIUM BINDING PROTEIN 5	3163	3297	5555	4428	3163	10768	4359	6306	chr7:12298311-12309059	1451826_at, 1421780_a_at
Cacna1f	View	View		995	-	1.64	-	1.84		Link	CALCIUM CHANNEL, VOLTAGE-DEPENDENT, ALPHA 1F SUBUNIT	3307	3669	2219	1351	3307	2689	2763	1499	chrX:6764079-6792152	1449955_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Cacna2d4	View	View		-	-	-	0.47	-			CALCIUM CHANNEL, VOLTAGE-DEPENDENT, ALPHA 2/DELTA SUBUNIT 4	767	687	1211	1656	767	1642	989	1377	chr6:119202145-119316175	1442863_at
Cadps2	View	View		596	-	0.14	-	-			CEREBELLUM POSTNATAL DEVELOPMENT ASSOCIATED PROTEIN 2	294	323	329	2275	294	368	312	379	chr6:23212799-23789139	1451499_at
Calu	View	View		1040	-	0.72	3.14	0.66			CALUMENIN	2113	2027	1830	2542	2113	674	1972	2977	chr6:29298191-29326677	1415870_at
Camk2b	View	View		390	-	-	0.16	0.03			CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE II, BETA	338	450	59	31	338	2128	199	7826	chr11:5869675-5965751	1455869_at, 1448676_at
Camsap1l1	View	View		248	-	-	0.19	-			CALMODULIN REGULATED SPECTRIN-ASSOCIATED PROTEIN 1-LIKE 1	30	34	111	179	30	162	71	121	chr1:138084664-138162515	1459385_at
Casp7	View	View		-	-	2.07	0.11	0.36	Link		CASPASE 7	498	658	775	375	498	4684	637	1748	chr19:56457666-56494345	1426062_a_at, 1448659_at
Cbx7	View	View		-	-	0.13	0.56	-			CHROMOBOX HOMOLOG 7	197	100	14	104	197	349	106	154	chr15:79743065-79759894	1420039_s_at
Ccdc64	View	View		879	-	-	3.18	4.48			COILED-COIL DOMAIN CONTAINING 64	2391	2411	1772	802	2391	751	2082	465	chr5:115909177-115992551	1426816_at
Cckbr	View	View		486	0.15	0.19	0.03	0.06			CHOLECYSTOKININ B RECEPTOR	70	452	109	576	70	2375	90	1451	chr7:105299638-105344719	1460663_at, 1454770_at
Ccl21c	View	View		-	0.04	-	-	-			CHEMOKINE (C-C MOTIF) LIGAND 21B	9	204	7	6	9	8	8	6	chr4:42015844-42016974	1419426_s_at
Ccndbp1	View	View		1279	-	2.03	-	-			CYCLIN D-TYPE BINDING-PROTEIN 1	5235	5212	7248	3572	5235	5433	6242	4374	chr2:120699913-120708332	1420745_a_at
Ccnt2	View	View		486	1.15	-	0.31	-			CYCLIN T2	539	468	1542	1988	539	1753	1041	1786	chr1:129601763-129631105	1453399_at
Cd47	View	View		346	-	0.47	-	-			CD47 ANTIGEN (RH-RELATED ANTIGEN, INTEGRIN-ASSOCIATED SIGNAL TRANSDUCER)	2118	2408	2679	5675	2118	2285	2399	2841	chr16:49775413-49826444	1449507_a_at
Cd8a	View	View		238	0.15	-	-	-			CD8 ANTIGEN, ALPHA CHAIN	79	519	44	52	79	78	62	49	chr6:71303062-71307116	1444078_at, 1425335_at
Cdh23	View	View		988	-	-	-	-			CADHERIN 23 (OTOCADHERIN)	27	40	9	29	27	21	18	7	chr10:59698656-60052690	1452028_a_at
Cdr2	View	View		325	-	5.62	6.44	37.81			CEREBELLAR DEGENERATION-RELATED 2	5429	4433	5837	1038	5429	843	5633	149	chr7:120748185-120773433	1417430_at
Cds1	View	View		273	1.53	4.02	-	2.03			CDP-DIACYLGLYCEROL SYNTHASE 1	4334	2824	3685	916	4334	3462	4010	1975	chr5:102005432-102064154	1428680_at
Cebpd	View	View		324	-	0.20	-	-			CCAAT/ENHANCER BINDING PROTEIN (C/EBP), DELTA	871	1049	432	2149	871	960	652	473	chr16:15800903-15803123	1423233_at
Cep290	View	View		502	-	-	-	-			CENTROSOMAL PROTEIN 290	1467	1185	1397	1094	1467	1535	1432	1348	chr10:99917995-100003343	1425642_at
Chd4	View	View		975	-	-	0.17	-			CHROMODOMAIN HELICASE DNA BINDING PROTEIN 4	27	52	126	147	27	155	77	173	chr6:125061782-125096133	1438476_a_at
Chrnb4	View	View		-	-	0.17	0.20	0.04			CHOLINERGIC RECEPTOR, NICOTINIC, BETA POLYPEPTIDE 4	106	201	117	702	106	531	112	2764	chr9:54826293-54846727	1457008_at, 1425849_at
Clca3	View	View		-	0.06	-	0.06	0.33	Link		CHLORIDE CHANNEL CALCIUM ACTIVATED 3	230	3926	133	76	230	3669	182	558	chr3:144941923-144970158	1416306_at
Cldn7	View	View		844	-	7.38	0.56	3.76			CLAUDIN 7	170	205	236	32	170	305	203	54	chr11:69781696-69784073	1448393_at
Clic4	View	View		249	0.51	-	0.32	0.27			CHLORIDE INTRACELLULAR CHANNEL 4 (MITOCHONDRIAL)	663	1291	769	1143	663	2055	716	2654	chr4:134486045-134544836	1438606_a_at
Clpb	View	View		362	-	-	0.32	0.38			CLPB CASEINOLYTIC PEPTIDASE B HOMOLOG (E. COLI)	420	578	483	652	420	1328	452	1204	chr7:101537589-101663989	1416541_at
Cltb	View	View		-	-	0.28	0.21	0.24	Link		CLATHRIN, LIGHT POLYPEPTIDE (LCB)	2026	2333	2683	9553	2026	9475	2355	9784	chr13:54602561-54620896	1453063_at, 1460740_at, 1456797_at
Cnga1	View	View		1573	-	3.33	3315.50	1600.88		Link	CYCLIC NUCLEOTIDE GATED CHANNEL ALPHA 1	13262	10718	12352	3708	13262	4	12807	8	chr5:72883250-72916981	1451763_at
Cnga3	View	View		340	NA	NA	NA	NA			CYCLIC NUCLEOTIDE GATED CHANNEL ALPHA 3									chr1:37163807-37207932
Cngb1b	View	View		464	-	9.63	17.23	75.75	Link	Link	CYCLIC NUCLEOTIDE GATED CHANNEL BETA 1B	7513	7150	5364	557	7513	436	6439	85	chr8:98128177-98195714	1451549_at
Cngb3	View	View		1661	0.35	0.62	0.07	0.06			CYCLIC NUCLEOTIDE GATED CHANNEL BETA 3	520	1480	503	817	520	7755	512	7983	chr4:19208080-19432497	1450492_at
Col19a1	View	View		633	2.35	14.68	9.78	8.81			PROCOLLAGEN, TYPE XIX, ALPHA 1	479	204	279	19	479	49	379	43	chr1:24218269-24541686	1421698_a_at
Col4a4	View	View		305	-	-	7.36	-			PROCOLLAGEN, TYPE IV, ALPHA 4	331	107	95	52	331	45	213	42	chr1:82331582-82465816	1440250_at
Cplx2	View	View		-	-	0.59	0.22	-			COMPLEXIN 2	395	470	1459	2461	395	1822	927	1815	chr13:54380974-54389837	1421477_at
Cpm	View	View		237	4.20	8.25	31.50	25.80			CARBOXYPEPTIDASE M	252	60	264	32	252	8	258	10	chr10:117032498-117088295	1453009_at, 1429413_at
Crb1	View	View		786	0.28	7.98	1.73	9.17			CRUMBS HOMOLOG 1 (DROSOPHILA)	2076	7535	7700	965	2076	1200	4888	533	chr1:141014754-141193511	1441330_at
Crot	View	View		-	-	0.38	0.32	0.42			CARNITINE O-OCTANOYLTRANSFERASE	1565	1619	1621	4265	1565	4861	1593	3780	chr5:8972045-9003167	1450966_at
Crx	View	View		253	-	1.87	-	2.05	Link	Link	CONE-ROD HOMEOBOX CONTAINING GENE	13926	15097	14279	7632	13926	12985	14103	6888	chr7:15024471-15038416	1418705_at
Crxos1	View	View		-	0.66	1.48	0.19	0.37			CRX OPPOSITE STRAND TRANSCRIPT 1	606	922	621	420	606	3195	614	1650	chr7:15054646-15062531	1460605_at
Crym	View	View		-	-	0.37	-	-			CRYSTALLIN, MU	3232	2718	2128	5721	3232	3535	2680	3324	chr7:119977533-119993137	1416776_at
Csda	View	View		442	-	1.99	2.74	3.08			COLD SHOCK DOMAIN PROTEIN A	15518	14644	13721	6899	15518	5667	14620	4748	chr6:131330551-131354143	1435800_a_at, 1451012_a_at
Ctdsp2	View	View		254	-	-	0.16	-			CTD (CARBOXY-TERMINAL DOMAIN, RNA POLYMERASE II, POLYPEPTIDE A) SMALL PHOSPHATASE 2	43	59	182	235	43	269	113	160	chr10:126398560-126402918	1423660_at
Cth	View	View		248	-	-	0.31	-			CYSTATHIONASE (CYSTATHIONINE GAMMA-LYASE)	329	257	518	410	329	1052	424	369	chr3:157829541-157860356	1426243_at
Ctnnd1	View	View		476	-	-	0.21	-			CATENIN (CADHERIN ASSOCIATED PROTEIN), DELTA 1	22	89	22	105	22	106	22	76	chr2:84401622-84451514	1445830_at
Cxx1c	View	View		-	0.67	0.34	0.25	0.37	Link		CAAX BOX 1 HOMOLOG C (HUMAN)	2274	3376	2747	8043	2274	9245	2511	6714	chrX:49802659-49803053	1450080_at
Cyr61	View	View		359	-	-	0.20	-			CYSTEINE RICH PROTEIN 61	68	159	121	92	68	337	95	87	chr3:145584362-145587367	1438133_a_at
D130004H04Rik	View	View		710	-	-	0.17	-			RIKEN CDNA D130004H04 GENE	114	128	595	765	114	658	355	656	chr4:82270712-82273600	1435104_at
D13Wsu177e	View	View		-	-	-	0.17	0.49			DNA SEGMENT, CHR 13, WAYNE STATE UNIVERSITY 177, EXPRESSED	171	207	507	624	171	992	339	685	chr13:54593813-54599696	1424620_at
D1Bwg0212e	View	View		-	-	-	0.19	-			DNA SEGMENT, CHR 1, BRIGHAM & WOMEN'S GENETICS 0212 EXPRESSED	51	64	209	196	51	262	130	178	chr1:39480348-39491437	1452824_at
D1Ertd622e	View	View		-	1.53	2.95	3.63	3.64			DNA SEGMENT, CHR 1, ERATO DOI 622, EXPRESSED	1309	854	1319	447	1309	361	1314	361	chr1:99474307-99492382	1448721_at
D230044M03Rik	View	View		677	-	0.00	-	-			RIKEN CDNA D230044M03 GENE	16	31	3	1340	16	4	10	3	chr10:14405824-14408412	1430110_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
D330010C22Rik	View	View		1618	-	8.84	-	-			RIKEN CDNA 330010C22 GENE	258	91	672	76	258	91	465	46	chr4:151150823-151162408	1444404_at, 1436277_at
D430039N05Rik	View	View		298	-	-	0.29	-			RIKEN CDNA D430039N05 GENE	1227	1635	4359	4109	1227	4167	2793	3496	chr2:83613567-83682197	1436350_at
D6Wsu176e	View	View		-	-	3.33	-	2.94			DNA SEGMENT, CHR 6, WAYNE STATE UNIVERSITY 176, EXPRESSED	2973	2740	4027	1210	2973	1705	3500	1189	chr6:22258450-22289388	1448904_at, 1417953_at
D730039F16Rik	View	View		-	-	13.00	-	-			RIKEN CDNA D730039F16 GENE	101	57	117	9	101	85	109	8	chr2:34696405-34714142	1425746_at
D9Ertd292e	-	-		-	-	-	0.17	-			DNA SEGMENT, CHR 9, ERATO DOI 292, EXPRESSED	22	7	50	49	22	127	36	63	chr9	1446102_at
Dcamkl1	View	View		370	-	-	0.11	-			DOUBLE CORTIN AND CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-LIKE 1	11	14	90	103	11	103	51	114	chr3:55330557-55624607	1451917_a_at
Ddit3	View	View		529	-	-	0.19	-			DNA-DAMAGE INDUCIBLE TRANSCRIPT 3	40	28	58	164	40	216	49	142	chr10:126693757-126699237	1443897_at
Dgkd	View	View		-	-	-	0.07	-	Link		DIACYLGLYCEROL KINASE, DELTA	8	5	42	134	8	121	25	165	chr1:89711545-89775660	1443781_at, 1442254_at
Dhrs3	View	View		262	1.72	1.81	4.78	8.83			DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 3	1224	711	1126	621	1224	256	1175	133	chr4:144159764-144194896	1448390_a_at
Dleu7	View	View		-	-	6.60	2.84	4.28			DELETED IN LYMPHOCYTIC LEUKEMIA, 7	179	235	376	57	179	63	278	65	chr14:61230339-61247073	1442180_at
Dnajc9	View	View		-	-	-	0.28	-			DNAJ (HSP40) HOMOLOG, SUBFAMILY C, MEMBER 9	427	380	1516	1438	427	1520	972	1671	chr14:19173190-19177432	1426473_at
Dnm1l	View	View		-	-	-	0.18	-			DYNAMIN 1-LIKE	108	80	690	656	108	588	399	659	chr16:16225811-16272608	1452638_s_at
Dock6	View	View		-	-	0.20	-	-			DEDICATOR OF CYTOKINESIS 6	52	37	25	122	52	128	39	70	chr9:21550590-21603018	1427240_at
Dock8	View	View		240	-	5.44	-	-			DEDICATOR OF CYTOKINESIS 8	224	150	484	89	224	113	354	178	chr19:25066626-25269529	1449419_at
Dock9	View	View		226	0.06	-	0.02	-			DEDICATOR OF CYTOKINESIS 9	16	273	621	552	16	794	319	464	chr14:120677334-120873642	1439200_x_at
Dpf3	View	View		-	1.63	4.97	3.40	6.86			D4, ZINC AND DOUBLE PHD FINGERS, FAMILY 3	747	457	1173	236	747	220	960	140	chr12:84188281-84260507	1450162_at, 1442686_at
Drd4	View	View		-	-	2.22	-	19.94			DOPAMINE RECEPTOR 4	7173	8399	7942	3571	7173	7084	7558	379	chr7:141143350-141147783	1422830_s_at
Dynlt3	View	View		217	-	-	0.20	-			DYNEIN LIGHT CHAIN TCTEX-TYPE 3	457	416	2169	2157	457	2331	1313	2065	chrX:8811229-8819942	1449928_at
Dyrk2	View	View		1035	-	1.66	3.66	2.64			DUAL-SPECIFICITY TYROSINE-(Y)-PHOSPHORYLATION REGULATED KINASE 2	4463	3322	2271	1370	4463	1221	3367	1276	chr10:118262338-118271896	1436918_at, 1428637_at
E130012K09	View	View		903	-	-	0.39	-	Link		HYPOTHETICAL PROTEIN E130012K09	5206	6100	208	201	5206	13197	2707	4519	chr10:93723464-93728502	1457737_at
E130304F04Rik	-	-		-	-	5.79	3.73	6.37			RIKEN CDNA E130304F04 GENE	1130	783	1187	205	1130	303	1159	182	chrNT_110857:66905-112693	1434297_at
Ebpl	View	View		686	-	0.57	8.15	3.49			EMOPAMIL BINDING PROTEIN-LIKE	611	911	513	903	611	75	562	161	chr14:60294860-60314549	1458177_at, 1417298_at
Ece1	View	View		1397	0.47	0.63	0.29	0.32			ENDOTHELIN CONVERTING ENZYME 1	709	1516	619	980	709	2435	664	2068	chr4:137185658-137237301	1455741_a_at, 1434177_at, 1441423_at
Edn2	View	View		439	-	-	9.63	-			ENDOTHELIN 2	770	796	102	121	770	80	436	34	chr4:119658836-119664996	1449161_at
Egf	View	View		246	-	8.46	0.77	11.22			EPIDERMAL GROWTH FACTOR	553	677	457	54	553	715	505	45	chr3:129669600-129747338	1443066_at
Egr1	View	View		1608	0.42	0.21	-	0.15			EARLY GROWTH RESPONSE 1	697	1671	1557	7420	697	1348	1127	7591	chr18:34987181-34990930	1417065_at
Eif2s3x	View	View		-	-	-	0.33	-			EUKARYOTIC TRANSLATION INITIATION FACTOR 2, SUBUNIT 3, STRUCTURAL GENE X-LINKED	575	486	1851	1774	575	1755	1213	1802	chrX:90441422-90465370	1421895_at
Eif3s8	View	View		-	-	-	0.22	-			EUKARYOTIC TRANSLATION INITIATION FACTOR 3, SUBUNIT 8	523	507	1871	2003	523	2330	1197	2187	chr7:126338055-126357551	1415859_at
Elovl2	View	View		432	0.20	0.71	0.24	0.21			ELONGATION OF VERY LONG CHAIN FATTY ACIDS (FEN1/ELO2, SUR4/ELO3, YEAST)-LIKE 2	1155	5685	1054	1484	1155	4799	1105	5257	chr13:41196268-41208172	1416444_at
Elovl4	View	View		230	-	-	1.48	1.37		Link	ELONGATION OF VERY LONG CHAIN FATTY ACIDS (FEN1/ELO2, SUR4/ELO3, YEAST)-LIKE 4	9352	9868	8148	6914	9352	6306	8750	6401	chr9:83575418-83602883	1424306_at
Elovl7	View	View		-	-	-	0.14	0.08			ELOVL FAMILY MEMBER 7, ELONGATION OF LONG CHAIN FATTY ACIDS (YEAST)	43	60	88	67	43	303	66	829	chr13:109335180-109405803	1424098_at, 1440312_at, 1441891_x_at
En2	View	View		973	-	-	0.09	-			ENGRAILED 2	40	59	59	35	40	466	50	93	chr5:28497267-28502960	1418868_at
Enpp5	View	View		-	-	-	0.35	-	Link		ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE 5	1805	1716	4606	4076	1805	5164	3206	4912	chr17:43541924-43549614	1425702_a_at
Epas1	View	View		-	2.14	-	2.09	2.11			ENDOTHELIAL PAS DOMAIN PROTEIN 1	6613	3090	4819	5100	6613	3158	5716	2704	chr17:86662228-86739907	1435436_at
Epb4.1l1	View	View		-	0.33	-	-	-			ERYTHROCYTE PROTEIN BAND 4.1-LIKE 1	1063	3257	1069	1113	1063	1422	1066	1221	chr2:156112525-156228930	1460592_at
Epha10	View	View		-	0.12	-	0.17	0.51			EPH RECEPTOR A10	342	2748	266	135	342	1994	304	591	chr4:124384128-124388812	1436093_at
Erdr1	-	-		-	0.24	-	0.07	-			ERYTHROID DIFFERENTIATION REGULATOR 1	282	1192	3068	2590	282	4323	1675	2566	-	1452406_x_at
Ermap	View	View		363	-	-	0.12	0.01			ERYTHROBLAST MEMBRANE-ASSOCIATED PROTEIN	33	96	89	147	33	268	61	7786	chr4:118673522-118687908	1418909_at
Esrrb	View	View		1503	-	5.20	6.67	14.13	Link		ESTROGEN RECEPTOR RELATED 2	580	448	946	182	580	87	763	54	chr12:87250220-87410725	1422986_at, 1436926_at, 1441921_x_at
Ewsr1	View	View		448	-	5.91	1.74	-			EWING SARCOMA BREAKPOINT REGION 1	643	445	880	149	643	370	762	205	chr11:4969701-4999070	1425919_at
Ext1	View	View		260	2.14	-	3.71	-			EXOSTOSES (MULTIPLE) 1	1801	841	870	1239	1801	485	1336	532	chr15:52898747-53175446	1417730_at
Eya1	View	View		1389	-	-	0.09	0.04			EYES ABSENT 1 HOMOLOG (DROSOPHILA)	17	27	24	72	17	182	21	594	chr1:14154172-14295413	1443117_at, 1457424_at, 1421727_at
Fabp5	View	View		-	-	0.42	-	-			FATTY ACID BINDING PROTEIN 5, EPIDERMAL	3568	3786	3441	8212	3568	3083	3505	4571	chr3:9995121-9999139	1416021_a_at
Fabp7	View	View		-	0.03	0.04	0.02	0.02			FATTY ACID BINDING PROTEIN 7, BRAIN	118	3761	261	6229	118	5796	190	10899	chr10:57473338-57476865	1450779_at
Faim	View	View		507	-	5.36	4.04	4.98			FAS APOPTOTIC INHIBITORY MOLECULE	3846	4244	5220	973	3846	951	4533	910	chr9:98795725-98811370	1418029_at
Fbxw11	View	View		259	-	-	0.17	-			F-BOX AND WD-40 DOMAIN PROTEIN 11	20	28	158	138	20	116	89	142	chr11:32542748-32646816	1438336_at
Fgf11	View	View		757	-	-	0.17	-			FIBROBLAST GROWTH FACTOR 11	24	42	120	115	24	140	72	124	chr11:69612264-69617911	1421793_at
Fin15	View	View		-	-	0.57	0.23	0.35			FIBROBLAST GROWTH FACTOR INDUCIBLE 15	1007	1124	1597	2820	1007	4382	1302	3754	chr6:50131321-50131584	1421534_at, 1439263_at
Fkbp5	View	View		-	-	0.33	-	-			FK506 BINDING PROTEIN 5	681	655	562	1685	681	602	622	859	chr17:28126686-28213738	1416125_at
Fkbp9	View	View		627	-	0.61	0.30	-			FK506 BINDING PROTEIN 9	843	849	990	1619	843	2854	917	1193	chr6:56761637-56808935	1437687_x_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Fntb	View	View		-	-	5.61	-	-			FARNESYLTRANSFERASE, CAAX BOX, BETA	65	37	393	70	65	26	229	39	chr12:77756307-77840254	1459043_at
Frmd6	View	View		984	-	-	0.17	-			FERM DOMAIN CONTAINING 6	46	79	92	237	46	264	69	327	chr12:71744119-71820839	1457184_at
Frmpd1	View	View		-	-	7.41	3.96	7.69			FERM AND PDZ DOMAIN CONTAINING 1	2708	3041	1749	236	2708	684	2229	290	chr4:45265731-45307036	1435189_at
Fscn2	View	View		-	-	111.17	10.04	14.32	Link		FASCIN HOMOLOG 2, ACTIN-BUNDLING PROTEIN, RETINAL (STRONGYLOCENTROTUS PURPURATUS)	1767	1976	667	6	1767	176	1217	85	chr11:120177624-120184261	1440605_at
Fus	View	View		919	-	-	0.38	-			FUSION, DERIVED FROM T(12;16) MALIGNANT LIPOSARCOMA (HUMAN)	2281	2140	4382	4652	2281	5936	3332	5534	chr7:95337213-95338638	1451285_at
Gabra2	View	View		583	-	-	0.19	-			GAMMA-AMINOBUTYRIC ACID (GABA-A) RECEPTOR, SUBUNIT ALPHA 2	81	67	608	486	81	418	345	406	chr5:71240192-71374984	1421738_at
Galnt10	View	View		-	0.69	1.90	3.65	2.47			UDP-N-ACETYL-ALPHA-D-GALACTOSAMINE:POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE 10	1127	1623	820	432	1127	309	974	394	chr11:57461637-57603696	1418195_at
Galnt13	View	View		314	-	0.43	0.17	0.27			UDP-N-ACETYL-ALPHA-D-GALACTOSAMINE:POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE 13	289	399	470	1090	289	1714	380	1404	chr2:54331926-54928347	1457045_at
Gas7	View	View		-	0.74	8.49	2.83	4.09			GROWTH ARREST SPECIFIC 7	1009	1356	781	92	1009	357	895	219	chr11:67363349-67501169	1417859_at
Gckr	View	View		-	0.30	3.77	0.52	2.73			GLUCOKINASE REGULATORY PROTEIN	869	2933	1249	331	869	1674	1059	388	chr5:31574162-31603883	1426059_at
Gfap	View	View		780	-	0.13	1.93	-			GLIAL FIBRILLARY ACIDIC PROTEIN	680	875	155	1210	680	353	418	187	chr11:102703437-102713221	1426509_s_at, 1440142_s_at, 1426508_at
Gfra1	View	View		1193	-	-	0.19	-			GLIAL CELL LINE DERIVED NEUROTROPHIC FACTOR FAMILY RECEPTOR ALPHA 1	30	17	121	124	30	154	76	97	chr19:58288862-58508567	1421973_at
Ggtl3	View	View		367	-	-	0.32	-			GAMMA-GLUTAMYLTRANSFERASE-LIKE 3	334	368	898	1176	334	1030	616	1088	chr2:155181828-155206284	1451094_at
Gja9	View	View		467	-	-	0.31	-			GAP JUNCTION MEMBRANE CHANNEL PROTEIN ALPHA 9	345	333	1048	793	345	1105	697	871	chr2:113701037-113705060	1423019_at
Glipr2	View	View		1020	-	0.17	-	-			GLI PATHOGENESIS-RELATED 2	22	13	36	214	22	51	29	29	chr4:43978802-44000218	1428492_at
Glo1	View	View		534	0.63	0.78	0.36	0.53			GLYOXALASE 1	5766	9219	11834	15228	5766	15812	8800	16667	chr17:30319878-30339627	1424109_a_at, 1424108_at, 1451240_a_at
Glra1	View	View		886	-	-	0.18	-			GLYCINE RECEPTOR, ALPHA 1 SUBUNIT	97	173	254	224	97	532	176	430	chr11:55358236-55417834	1437139_at
Gls	View	View		319	-	-	0.19	-			GLUTAMINASE	160	161	512	495	160	848	336	692	chr1:52129826-52177777	1435708_at
Gm1582	View	View		-	1.68	22.18	3.31	25.33			GENE MODEL 1582, (NCBI)	4230	2520	3926	177	4230	1279	4078	161	chr14:32394390-32404346	1458506_at
Gm1683	View	View		645	-	0.16	-	-			GENE MODEL 1683, (NCBI)	9	25	39	245	9	4	24	38	chr5:64872998-64889834	1449600_at
Gnat1	View	View		449	-	32.25	1095.62	583.00	Link	Link	GUANINE NUCLEOTIDE BINDING PROTEIN, ALPHA TRANSDUCING 1	37251	37675	31543	978	37251	34	34397	59	chr9:107532576-107537716	1460212_at
Gnat2	View	View		774	0.21	-	0.22	0.30	Link		GUANINE NUCLEOTIDE BINDING PROTEIN, ALPHA TRANSDUCING 2	6558	31411	6786	8343	6558	29421	6672	22199	chr3:108221124-108229485	1422907_at
Gnb1	View	View		666	-	4.68	30.09	9.04	Link		GUANINE NUCLEOTIDE BINDING PROTEIN, BETA 1	18627	16893	30106	6432	18627	619	24367	2695	chr4:154335170-154401616	1417432_a_at, 1454696_at
Gnb2	View	View		813	-	0.33	0.54	0.59			GUANINE NUCLEOTIDE BINDING PROTEIN, BETA 2	2863	3324	2752	8402	2863	5291	2808	4734	chr5:137757915-137763022	1450623_at
Gnb3	View	View		640	0.52	0.48	0.40	0.51	Link		GUANINE NUCLEOTIDE BINDING PROTEIN, BETA 3	8936	17104	6396	13273	8936	22620	7666	15134	chr6:124799859-124805894	1449159_at
Gng11	View	View		849	-	0.30	-	-			GUANINE NUCLEOTIDE BINDING PROTEIN (G PROTEIN), GAMMA 11	478	477	375	1241	478	452	427	920	chr6:3953987-3958445	1448942_at
Gngt1	View	View		849	-	3.15	2.03	2.34	Link		GUANINE NUCLEOTIDE BINDING PROTEIN (G PROTEIN), GAMMA TRANSDUCING ACTIVITY POLYPEPTIDE 1	13938	10711	12013	3811	13938	6870	12976	5539	chr6:3944012-3947436	1425167_a_at, 1451633_a_at, 1425168_at
Gngt2	View	View		206	-	0.31	0.18	0.13	Link		GUANINE NUCLEOTIDE BINDING PROTEIN (G PROTEIN), GAMMA TRANSDUCING ACTIVITY POLYPEPTIDE 2	115	268	148	472	115	634	132	1002	chr11:95658760-95661819	1428733_at
Gosr1	View	View		372	-	-	0.10	-			GOLGI SNAP RECEPTOR COMPLEX MEMBER 1	17	27	121	146	17	163	69	128	chr11:76542797-76579750	1448256_at
Gpr178	View	View		410	-	-	0.28	-			G PROTEIN-COUPLED RECEPTOR 178	299	211	1161	1216	299	1065	730	713	chr17:6213432-6408178	1440862_at, 1452848_at
Gpr98	View	View		-	-	1.75	1.45	2.31			G PROTEIN-COUPLED RECEPTOR 98	931	967	995	570	931	640	963	416	chr13:81558819-82072776	1425314_at
Gpsm2	View	View		505	0.58	7.96	6.18	10.86			G-PROTEIN SIGNALLING MODULATOR 2 (AGS3-LIKE, C. ELEGANS)	4416	7616	4771	599	4416	714	4594	423	chr3:108806694-108850199	1424895_at
Greb1	View	View		2313	-	-	0.17	-			GENE REGULATED BY ESTROGEN IN BREAST CANCER PROTEIN	49	81	192	263	49	284	121	214	chr12:16697094-16765652	1419593_at
Grk1	View	View		-	-	2.62	-	-	Link		G PROTEIN-COUPLED RECEPTOR KINASE 1	674	529	2195	837	674	626	1435	799	chr8:13405058-13417557	1421361_at
Grtp1	View	View		-	-	5.75	3.81	5.40			GH REGULATED TBC PROTEIN 1	2210	2288	1339	233	2210	580	1775	329	chr8:13176846-13200601	1439150_x_at, 1425891_a_at
Gtf2i	View	View		-	-	-	0.12	-			GENERAL TRANSCRIPTION FACTOR II I	38	25	220	238	38	329	129	275	chr5:134522470-134599357	1431675_a_at, 1431676_x_at
Guca1a	View	View		927	0.61	-	0.78	-			GUANYLATE CYCLASE ACTIVATOR 1A (RETINA)	21635	35667	21160	18177	21635	27715	21398	22325	chr17:46857749-46863775	1421061_at
Guca1b	View	View		226	-	23.30	5.56	12.43	Link		GUANYLATE CYCLASE ACTIVATOR 1B	22046	19720	9485	407	22046	3964	15766	1268	chr17:46750145-46856158	1425138_at, 1425441_at
Gucy2e	View	View		290	-	2.35	-	-		Link	GUANYLATE CYCLASE 2E	136	125	348	148	136	205	242	119	chr11:69039230-69053217	1422193_at
Gulo	View	View		300	0.06	0.18	0.11	0.08	Link		GULONOLACTONE (L-) OXIDASE	522	8088	640	3535	522	4641	581	7237	chr14:64941676-64962250	1451297_at
Gzmm	View	View		-	0.61	2.24	0.12	0.55			GRANZYME M (LYMPHOCYTE MET-ASE 1)	1168	1913	1598	714	1168	9803	1383	2522	chr10:79092149-79098389	1449501_a_at
H2-Q6	View	View		-	-	0.07	-	-			HISTOCOMPATIBILITY 2, Q REGION LOCUS 1	35	24	23	318	35	58	29	64	chr17:35032930-35038102	1451644_a_at
Hcls1	View	View		357	-	39.78	-	9.86			HEMATOPOIETIC CELL SPECIFIC LYN SUBSTRATE 1	213	115	358	9	213	113	286	29	chr16:36856526-36881988	1418842_at
Hcrtr1	View	View		-	-	0.20	-	-			HYPOCRETIN (OREXIN) RECEPTOR 1	51	94	93	473	51	37	72	156	chr4:129633145-129639932	1436295_at
Herc3	View	View		-	-	3.29	2.46	2.66			HECT DOMAIN AND RLD 3	2089	1729	2019	613	2089	850	2054	771	chr6:58761467-58849978	1433590_at
Hes5	View	View		-	-	-	0.15	-			HAIRY AND ENHANCER OF SPLIT 5 (DROSOPHILA)	35	87	127	111	35	230	81	214	chr4:153804723-153806171	1423146_at
Hist1h1c	View	View		968	-	3.13	-	-			HISTONE CLUSTER 1, H1C	2235	1657	4158	1329	2235	1766	3197	1297	chr13:23746272-23747831	1436994_a_at, 1416101_a_at
Hist3h2a	View	View		357	0.59	0.64	0.37	-			HISTONE CLUSTER 3, H2A	3733	6280	2610	4057	3733	10082	3172	4618	chr11:58770880-58789293	1435865_at, 1435866_s_at, 1455712_at
Hist3h2ba	View	View		362	0.50	0.69	0.18	0.29	Link		HISTONE CLUSTER 3, H2BA	990	1964	3696	5386	990	5576	2343	8108	chr11:58765106-58765727	1449482_at
Hk2	View	View		-	0.34	2.56	0.41	-			HEXOKINASE 2	2841	8290	7314	2853	2841	6934	5078	4991	chr6:82690705-82740117	1422612_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Hlrc1	View	View		303	-	6.41	1.63	5.01			HEAT-LIKE (PBS LYASE) REPEAT CONTAINING 1	3738	3695	3710	579	3738	2300	3724	744	chr10:80787592-80797094	1436402_at
Hmg20a	View	View		-	-	-	0.08	-			HIGH MOBILITY GROUP 20A	10	24	53	55	10	118	32	108	chr9:56216781-56295021	1438043_at
Hmgb2	View	View		365	-	3.43	-	2.65			HIGH MOBILITY GROUP BOX 2	720	1052	1125	328	720	572	923	348	chr8:60404049-60406636	1452534_a_at
Hnrpa1	View	View		537	-	-	0.19	-			HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1	67	81	226	217	67	354	147	189	chr15:103068451-103072048	1455740_at
Hrasls	View	View		1596	0.25	-	0.14	0.19			HRAS-LIKE SUPPRESSOR	71	282	130	79	71	502	101	518	chr16:29137359-29147981	1422919_at
Hspa1b	View	View		-	1.50	8.78	2.25	5.56			HEAT SHOCK PROTEIN 1B	2644	1764	1896	216	2644	1175	2270	408	chr17:34565135-34567063	1427127_x_at, 1427126_at, 1452318_a_at
Hspa9a	View	View		655	-	-	0.11	-			HEAT SHOCK PROTEIN 9A	41	25	343	391	41	358	192	300	chr18:35063391-35080287	1431274_a_at
Ibrdc2	View	View		216	0.49	9.95	4.07	8.56			IBR DOMAIN CONTAINING 2	285	584	657	66	285	70	471	55	chr13:47133692-47257448	1456834_at
Icmt	View	View		767	1.24	2.68	1.78	2.37			ISOPRENYLCYSTEINE CARBOXYL METHYLTRANSFERASE	7196	5826	6791	2536	7196	4053	6994	2948	chr4:151141104-151150919	1426500_at
Ier3	View	View		-	-	4.80	-	5.29			IMMEDIATE EARLY RESPONSE 3	2174	1636	3431	715	2174	3298	2803	530	chr17:35429737-35430969	1419647_a_at
Ier5	View	View		815	-	-	0.14	-			IMMEDIATE EARLY RESPONSE 5	23	18	64	119	23	161	44	188	chr1:156860722-156861648	1417613_at
Igsf3	View	View		687	-	-	0.28	0.31			IMMUNOGLOBULIN SUPERFAMILY, MEMBER 3	312	413	318	451	312	1125	315	1027	chr3:101506186-101589911	1431322_at
Igsf4a	View	View		1218	-	-	2.12	1.89			IMMUNOGLOBULIN SUPERFAMILY, MEMBER 4A	9307	9951	6519	5151	9307	4392	7913	4193	chr9:47281252-47602023	1417378_at
Ilvbl	View	View		-	-	-	0.14	-			ILVB (BACTERIAL ACETOLACTATE SYNTHASE)-LIKE	137	124	751	603	137	1014	444	620	chr10:77977671-77987622	1454658_at
Impdh1	View	View		372	-	2.00	-	2.11		Link	INOSINE 5'-PHOSPHATE DEHYDROGENASE 1	7065	7939	4803	2397	7065	5558	5934	2818	chr6:29150447-29166360	1423239_at
Inhbb	View	View		599	-	0.18	-	0.11			INHIBIN BETA-B	211	265	212	1197	211	190	212	1958	chr1:121243011-121249794	1426858_at
Insm2	View	View		729	-	0.07	-	0.12			INSULINOMA-ASSOCIATED 2	38	99	15	222	38	65	27	223	chr12:56517603-56519083	1422269_at, 1437781_at
Ipmk	View	View		-	1.42	3.02	-	2.15			INOSITOL POLYPHOSPHATE MULTIKINASE	1915	1351	1722	570	1915	1525	1819	845	chr10:70743093-70781185	1456200_at, 1436215_at, 1437856_at
Ipo4	View	View		254	0.20	0.59	0.59	-			IMPORTIN 4	1578	7777	1320	2226	1578	2658	1449	1674	chr14:54579824-54590028	1436420_a_at, 1450814_a_at
Iqcb1	View	View		-	-	-	-	-			IQ CALMODULIN-BINDING MOTIF CONTAINING 1	577	474	560	612	577	608	569	651	chr16:36747647-36791952	1434770_at
Iqsec3	View	View		597	0.44	-	-	-			IQ MOTIF AND SEC7 DOMAIN 3	4126	9400	3893	5409	4126	3248	4010	3085	chr6:121338552-121439297	1437912_at
Itpr3	View	View		247	0.13	-	-	-			INOSITOL 1,4,5-TRIPHOSPHATE RECEPTOR 3	93	726	135	99	93	199	114	63	chr17:26785125-26849812	1417297_at
Jam3	View	View		268	-	0.25	0.19	0.20			JUNCTION ADHESION MOLECULE 3	442	593	598	2359	442	2311	520	2620	chr9:26846831-26904839	1423503_at, 1444895_at
Kcnab1	View	View		234	-	0.42	-	0.33			POTASSIUM VOLTAGE-GATED CHANNEL, SHAKER-RELATED SUBFAMILY, BETA MEMBER 1	1364	1638	2151	5066	1364	1841	1758	5292	chr3:65197313-65466155	1448468_a_at
Kcnb1	View	View		-	-	4.01	5.10	6.59	Link		POTASSIUM VOLTAGE GATED CHANNEL, SHAB-RELATED SUBFAMILY, MEMBER 1	6738	5714	7719	1925	6738	1321	7229	1097	chr2:166794583-166880004	1423180_at, 1423179_at
Kcne2	View	View		275	-	7.45	0.20	5.75			POTASSIUM VOLTAGE-GATED CHANNEL, ISK-RELATED SUBFAMILY, GENE 2	2914	3505	3181	427	2914	14364	3048	530	chr16:92181248-92186988	1449421_a_at
Kcnj14	View	View		956	1.61	49.25	96.57	121.67			POTASSIUM INWARDLY-RECTIFYING CHANNEL, SUBFAMILY J, MEMBER 14	7629	4725	9160	186	7629	79	8395	69	chr7:45684503-45692798	1452243_at
Kcnv2	View	View		224	-	2.86	-	2.05	Link	Link	POTASSIUM CHANNEL, SUBFAMILY V, MEMBER 2	2127	1657	2650	925	2127	2086	2389	1165	chr19:27389685-27404275	1440537_at
Khsrp	View	View		289	-	-	3.95	-			KH-TYPE SPLICING REGULATORY PROTEIN	1368	1619	426	350	1368	346	897	309	chr17:56706180-56716603	1428174_x_at
Kif1b	View	View		616	1.65	1.97	3.48	3.21			KINESIN FAMILY MEMBER 1B	1191	721	551	279	1191	342	871	271	chr4:148020119-148151498	1425270_at
Kif5c	View	View		1040	-	-	0.20	-			KINESIN FAMILY MEMBER 5C	135	140	830	873	135	664	483	839	chr2:49441323-49596787	1422945_a_at
Klf3	View	View		314	0.58	0.56	0.32	0.44			KRUPPEL-LIKE FACTOR 3 (BASIC)	451	784	658	1176	451	1409	555	1264	chr5:65082658-65109264	1454666_at
Klf9	View	View		248	-	-	2.60	2.08			KRUPPEL-LIKE FACTOR 9	5099	5245	3548	4422	5099	1964	4324	2079	chr19:23208323-23234008	1428289_at
Klhl18	View	View		-	-	2.71	3.12	3.10			KELCH-LIKE 18 (DROSOPHILA)	3527	3607	2483	916	3527	1130	3005	969	chr9:110271094-110321510	1455543_at
Klhl4	View	View		-	0.48	0.44	0.20	0.15			KELCH-LIKE 4 (DROSOPHILA)	208	429	260	597	208	1035	234	1551	chrX:110591464-110677642	1439078_at
Kpna2	View	View		-	1.45	4.74	1.67	3.69	Link		KARYOPHERIN (IMPORTIN) ALPHA 2	10686	7372	10834	2287	10686	6393	10760	2916	chr11:106804719-106815615	1415860_at
Krt1-18	View	View		1607	2.81	4.72	1.90	2.63			KERATIN COMPLEX 1, ACIDIC, GENE 18	2676	953	3522	746	2676	1409	3099	1179	chr15:101856259-101860055	1448169_at
Laptm4a	View	View		-	-	-	0.27	-			LYSOSOMAL-ASSOCIATED PROTEIN TRANSMEMBRANE 4A	2257	1927	7532	8859	2257	8323	4895	7449	chr12:8947672-8964735	1423368_at
Laptm4b	View	View		-	-	1.97	-	-			LYSOSOMAL-ASSOCIATED PROTEIN TRANSMEMBRANE 4B	13420	14672	13040	6622	13420	14144	13230	11219	chr15:34182615-34228884	1416148_at
Leng9	View	View		-	-	-	0.16	-			LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER 9	22	67	78	100	22	134	50	84	chr7:3751305-3752762	1440191_s_at
Lgr5	View	View		2078	0.10	0.06	0.06	0.05			LEUCINE RICH REPEAT CONTAINING G PROTEIN COUPLED RECEPTOR 5	55	545	116	1956	55	937	86	1655	chr10:114855736-114991603	1441809_at
Lin7c	View	View		612	-	-	0.32	-			LIN-7 HOMOLOG C (C. ELEGANS)	332	245	1177	1083	332	1037	755	1198	chr2:109691707-109701815	1449262_s_at
Llgl2	View	View		-	-	3.23	2.52	2.77			LETHAL GIANT LARVAE HOMOLOG 2 (DROSOPHILA)	1633	1542	1092	338	1633	649	1363	492	chr11:115650918-115671348	1423938_at
Lmnb2	View	View		-	-	-	0.19	-			LAMIN B2	27	19	82	89	27	142	55	73	chr10:80304493-80321362	1451849_a_at
Lmo1	View	View		772	-	1.50	5.58	2.80			LIM DOMAIN ONLY 1	1065	1397	1495	998	1065	191	1280	457	chr7:108930048-108934847	1418478_at
LOC236220	-	-		-	-	0.11	-	-			HYPOTHETICAL LOC236220	11	48	21	192	11	35	16	30	chrNT_164885:814-1330	1425220_x_at
Lrfn2	View	View		399	0.24	-	0.21	-			LEUCINE RICH REPEAT AND FIBRONECTIN TYPE III DOMAIN CONTAINING 2	361	1480	282	255	361	1717	322	370	chr17:48397946-48563155	1453126_at
Lrrc2	View	View		-	1.44	-	6.34	11.71			LEUCINE RICH REPEAT CONTAINING 2	1134	786	317	252	1134	179	726	62	chr9:110796361-110828878	1453628_s_at, 1427388_at
Lrrc22	View	View		237	-	3.77	1.48	3.04			LEUCINE RICH REPEAT CONTAINING 22	3099	3210	2883	764	3099	2088	2991	983	chr14:35979290-35984976	1443940_at
Lrrc4	View	View		1340	-	0.28	-	0.28			LEUCINE RICH REPEAT CONTAINING 4	305	306	340	1199	305	402	323	1135	chr6:28779666-28781624	1416097_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Lrtm1	View	View		875	-	-	0.27	0.49			LEUCINE-RICH REPEATS AND TRANSMEMBRANE DOMAINS 1	789	601	2764	2601	789	2959	1777	3599	chr14:27845265-27854891	1443866_at
Maf	View	View		827	-	0.15	-	0.32			AVIAN MUSCULOAPONEUROTIC FIBROSARCOMA (V-MAF) AS42 ONCOGENE HOMOLOG	83	54	73	481	83	83	78	245	chr8:118568919-118592849	1437473_at, 1456060_at, 1447849_s_at
Malat1	-	-		-	-	-	0.21	-			METASTASIS ASSOCIATED LUNG ADENOCARCINOMA TRANSCRIPT 1 (NON-CODING RNA)	383	375	1436	1781	383	1795	910	1728	chr19	1427285_s_at
Mapk1	View	View		458	-	-	0.14	-			MITOGEN ACTIVATED PROTEIN KINASE 1	110	154	808	654	110	789	459	678	chr16:16896945-16961015	1419568_at
Mapk4	View	View		-	-	-	0.27	-			MITOGEN-ACTIVATED PROTEIN KINASE 4	391	459	415	374	391	1442	403	661	chr18:74053858-74190298	1435367_at
Marveld3	View	View		-	-	-	7.98	6.61			MARVEL (MEMBRANE-ASSOCIATING) DOMAIN CONTAINING 3	407	203	200	119	407	51	304	46	chr8:112837034-112851301	1453264_at
Mast4	View	View		357	-	0.20	-	-			MICROTUBULE ASSOCIATED SERINE/THREONINE KINASE FAMILY MEMBER 4	112	130	120	605	112	181	116	206	chr13:103852873-104454843	1445866_at
Mc1r	View	View		331	-	19.14	-	-			MELANOCORTIN 1 RECEPTOR	105	86	134	7	105	11	120	11	chr8:126293586-126294846	1422069_at
Mcc	View	View		264	-	0.21	0.32	0.19			MUTATED IN COLORECTAL CANCERS	315	384	400	1881	315	980	358	1890	chr18:44555218-44937494	1438081_at
Mdm1	View	View		290	-	3.75	-	2.69			TRANSFORMED MOUSE 3T3 CELL DOUBLE MINUTE 1	2469	2087	3788	1011	2469	1984	3129	1162	chr10:117532014-117571990	1451053_a_at
Mef2c	View	View		1489	-	10.74	5.63	9.86			MYOCYTE ENHANCER FACTOR 2C	675	613	1138	106	675	120	907	92	chr13:83981532-84141286	1421027_a_at, 1421028_a_at, 1424852_at, 1439946_at, 1451507_at
Mfng	View	View		-	0.43	-	0.18	0.22			MANIC FRINGE HOMOLOG (DROSOPHILA)	220	516	368	377	220	1204	294	1309	chr15:78583137-78600713	1416992_at
Mknk1	View	View		-	1.94	1.40	3.04	1.99			MAP KINASE-INTERACTING SERINE/THREONINE KINASE 1	1298	668	873	624	1298	427	1086	546	chr4:115337178-115377180	1417630_at
Mlf1	View	View		1262	-	-	5.08	7.93			MYELOID LEUKEMIA FACTOR 1	376	308	543	617	376	74	460	58	chr3:67462026-67487932	1418589_a_at
Moxd1	View	View		615	0.50	-	0.18	-			MONOOXYGENASE, DBH-LIKE 1	336	668	297	305	336	1818	317	342	chr10:23912933-23992199	1422643_at
Mpp4	View	View		-	-	2.34	-	3.64			MEMBRANE PROTEIN, PALMITOYLATED 4 (MAGUK P55 SUBFAMILY MEMBER 4)	15563	14536	14219	6073	15563	14817	14891	4087	chr1:59065489-59181765	1460368_at
Mpp6	View	View		1177	-	-	0.26	-			MEMBRANE PROTEIN, PALMITOYLATED 6 (MAGUK P55 SUBFAMILY MEMBER 6)	439	465	354	547	439	1669	397	687	chr6:50039835-50128173	1441546_at, 1440396_at, 1449348_at
Msl2l1	View	View		213	-	-	0.19	-			MALE-SPECIFIC LETHAL 2-LIKE 1 (DROSOPHILA)	218	236	1155	1258	218	1129	687	1069	chr9:100887852-100958425	1429109_at
Mt1	View	View		420	0.63	0.42	-	1.90			METALLOTHIONEIN 1	3653	5757	2716	6398	3653	4704	3185	1677	chr8:97068356-97069453	1422557_s_at
Mt2	View	View		237	0.56	0.31	-	2.09			METALLOTHIONEIN 2	1834	3290	1354	4308	1834	2503	1594	764	chr8:97061913-97062691	1428942_at
Mtac2d1	View	View		850	-	-	0.04	-			MEMBRANE TARGETING (TANDEM) C2 DOMAIN CONTAINING 1	12	49	12	20	12	278	12	11	chr12:102050117-102110540	1443933_at
Mtap2	View	View		312	-	1.46	0.31	-			MICROTUBULE-ASSOCIATED PROTEIN 2	655	739	1723	1183	655	2123	1189	1441	chr1:66184870-66375789	1421328_at, 1421327_at
Mtap6	View	View		563	-	-	0.30	0.40			MICROTUBULE-ASSOCIATED PROTEIN 6	1178	1549	991	1939	1178	3935	1085	2714	chr7:99141577-99211219	1422550_a_at
Mtpn	View	View		-	-	-	0.17	-			MYOTROPHIN	141	98	571	661	141	821	356	753	chr6:35439058-35469939	1420472_at
Mxra7	View	View		-	-	0.33	-	-			MATRIX-REMODELLING ASSOCIATED 7	1209	1682	622	1866	1209	1577	916	1089	chr11:116619494-116644136	1447509_at, 1440975_at
Mylk	View	View		620	0.44	3.46	0.50	-			MYOSIN, LIGHT POLYPEPTIDE KINASE	2346	5320	2732	789	2346	4719	2539	1247	chr16:34704668-34920340	1425506_at, 1425505_at
Myo7a	View	View		1014	1.86	-	1.54	-		Link	MYOSIN VIIA	1090	586	73	44	1090	708	582	258	chr7:97926593-97984444	1421385_a_at
Myocd	View	View		280	-	0.11	0.04	0.05			MYOCARDIN	11	22	21	191	11	275	16	350	chr11:64992756-65021661	1425808_a_at, 1425978_at
Nab2	View	View		277	-	0.23	-	0.37			NGFI-A BINDING PROTEIN 2	275	390	292	1258	275	201	284	774	chr10:127063868-127069627	1417930_at
Napb	View	View		-	0.70	-	0.30	-			N-ETHYLMALEIMIDE SENSITIVE FUSION PROTEIN ATTACHMENT PROTEIN BETA	1071	1525	4071	3227	1071	3531	2571	3174	chr2:148386098-148423861	1452444_at, 1427470_s_at
Nat1	View	View		249	0.03	-	-	-			N-ACETYLTRANSFERASE 1 (ARYLAMINE N-ACETYLTRANSFERASE)	49	1431	133	33	49	105	91	17	chr8:70419747-70421093	1421758_at
Ncam1	View	View		609	46.18	-	2.06	2.43			NEURAL CELL ADHESION MOLECULE 1	508	11	351	233	508	247	430	177	chr9:49257298-49322170	1442680_at
Ndn	View	View		-	-	-	0.44	-			NECDIN	3123	3326	6527	6749	3123	7132	4825	6379	chr7:62227270-62228875	1438625_s_at
Ndrg1	View	View		294	-	1.57	2.71	1.72			N-MYC DOWNSTREAM REGULATED GENE 1	5940	4450	5066	3225	5940	2190	5503	3195	chr15:66758991-66799308	1456174_x_at, 1420760_s_at
Neurod1	View	View		1423	-	-	0.38	0.57	Link		NEUROGENIC DIFFERENTIATION 1	8168	6999	14102	21777	8168	21398	11135	19677	chr2:79253480-79257479	1426413_at
Nfasc	View	View		309	-	-	3.33	2.47			NEUROFASCIN	3395	2815	2878	2374	3395	1020	3137	1268	chr1:134397537-134569303	1436205_at, 1459357_at
Nfkb1	View	View		350	-	0.33	0.18	0.39			NUCLEAR FACTOR OF KAPPA LIGHT CHAIN GENE ENHANCER IN B-CELLS 1, P105	346	400	465	1402	346	1911	406	1047	chr3:135522081-135628718	1427705_a_at
Nphp1	View	View		-	-	-	-	-			NEPHRONOPHTHISIS 1 (JUVENILE) HOMOLOG (HUMAN)	328	376	284	201	328	301	306	297	chr2:127432173-127480295	1416919_a_at
Npm3	View	View		1951	-	-	0.13	-			NUCLEOPLASMIN 3	17	44	101	122	17	132	59	133	chr19:45801047-45802874	1423522_at
Nr2e3	View	View		1882	0.27	-	183.64	17.23	Link	Link	NUCLEAR RECEPTOR SUBFAMILY 2, GROUP E, MEMBER 3	4040	15144	6158	5646	4040	22	5099	296	chr9:59740777-59748085	1423631_at
Nr4a1	View	View		-	-	-	0.13	0.40			NUCLEAR RECEPTOR SUBFAMILY 4, GROUP A, MEMBER 1	473	920	1399	1920	473	3576	936	2336	chr15:101094887-101102826	1416505_at
Nrl	View	View		860	-	2.78	974.91	3083.70	Link	Link	NEURAL RETINA LEUCINE ZIPPER GENE	31197	29946	30476	10946	31197	32	30837	10	chr14:54473589-54479052	1450946_at
Nrxn3	View	View		456	-	-	0.12	0.32			NEUREXIN III	297	298	1146	1260	297	2383	722	2251	chr12:89308664-90737434	1460101_at
Nsg1	View	View		290	-	-	0.30	-			NEURON SPECIFIC GENE FAMILY MEMBER 1	643	715	2134	2222	643	2131	1389	1818	chr5:38425442-38447716	1423055_at
Nsun3	View	View		455	-	-	0.19	-			NOL1/NOP2/SUN DOMAIN FAMILY 3	30	62	132	159	30	159	81	198	chr16:62674701-62745920	1444634_at
Nt5e	View	View		-	-	2.03	5.02	7.39			5' NUCLEOTIDASE, ECTO	3711	3944	5212	2564	3711	739	4462	604	chr9:88125533-88169982	1428547_at
Nup62	View	View		-	-	2.17	2.18	2.69			NUCLEOPORIN 62	6860	6158	8216	3786	6860	3152	7538	2805	chr7:44684381-44698846	1447905_x_at
Nupr1	View	View		-	0.68	0.16	-	-			NUCLEAR PROTEIN 1	204	299	144	885	204	271	174	103	chr7:126414397-126416637	1419665_a_at
Obox6	View	View		-	-	0.06	-	0.07			OOCYTE SPECIFIC HOMEOBOX 6	52	85	94	1472	52	90	73	1071	chr7:14991997-14993469	1440257_at
Olfm1	View	View		363	0.40	0.49	0.39	0.37	Link		OLFACTOMEDIN 1	3769	9399	3443	7006	3769	9708	3606	9684	chr2:28015102-28052745	1425784_a_at, 1455796_x_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Opn1mw	View	View		1119	-	494.33	0.63	72.63	Link		OPSIN 1 (CONE PIGMENTS), MEDIUM-WAVE-SENSITIVE (COLOR BLINDNESS, DEUTAN)	6269	7775	5932	12	6269	9928	6101	84	chrX:70380184-70403476	1419723_at
Opn1sw	View	View		542	0.41	24.13	0.26	-	Link		OPSIN 1 (CONE PIGMENTS), SHORT-WAVE-SENSITIVE (COLOR BLINDNESS, TRITAN)	8727	21454	13153	545	8727	33451	10940	12900	chr6:29326667-29330490	1449132_at, 1418552_at
Osgep	View	View		-	-	2.81	0.27	-	Link		O-SIALOGLYCOPROTEIN ENDOPEPTIDASE	1946	1788	2550	908	1946	7236	2248	1598	chr14:49828429-49846785	1418529_at
Otop3	View	View		536	0.07	-	0.07	0.20			OTOPETRIN 3	230	3429	225	178	230	3428	228	1113	chr11:115150869-115163016	1429036_at
Otx2	View	View		2011	0.74	0.48	-	0.46	Link		ORTHODENTICLE HOMOLOG 2 (DROSOPHILA)	6193	8398	4535	9484	6193	6905	5364	11720	chr14:47580137-47589457	1425926_a_at
Pacsin2	View	View		-	-	2.01	1.80	2.80			PROTEIN KINASE C AND CASEIN KINASE SUBSTRATE IN NEURONS 2	7853	7089	7305	3635	7853	4362	7579	2709	chr15:83203373-83292336	1417810_a_at
Parvb	View	View		-	0.65	-	0.20	-			PARVIN, BETA	531	822	372	460	531	2683	452	676	chr15:84059809-84140797	1438672_at
Parvg	View	View		-	-	-	0.15	-			PARVIN, GAMMA	23	89	49	21	23	157	36	29	chr15:84152486-84170705	1416875_at
Pbx3	View	View		2018	0.69	0.72	0.50	0.39			PRE B-CELL LEUKEMIA TRANSCRIPTION FACTOR 3	2720	3949	2434	3368	2720	5444	2577	6560	chr2:33993768-34193945	1447640_s_at
Pcdh15	View	View		372	0.53	-	0.18	0.23	Link		PROTOCADHERIN 15	807	1528	1266	1933	807	4590	1037	4562	chr10:73342356-74089930	1444317_at
Pcolce	View	View		-	-	0.20	3.75	-			PROCOLLAGEN C-ENDOPEPTIDASE ENHANCER PROTEIN	841	1011	188	951	841	224	515	270	chr5:137834897-137841156	1437165_a_at
Pdap1	View	View		247	-	-	0.30	-			PDGFA ASSOCIATED PROTEIN 1	366	355	1217	1275	366	1210	792	1473	chr5:145383183-145390524	1434020_at
Pde1c	View	View		627	-	-	0.09	-			PHOSPHODIESTERASE 1C	12	41	41	52	12	134	27	92	chr6:55999382-56291970	1429643_a_at
Pde6a	View	View		429	-	3.39	5.48	42.90	Link		PHOSPHODIESTERASE 6A, CGMP-SPECIFIC, ROD, ALPHA	4287	4494	4034	1190	4287	783	4161	97	chr18:61345868-61415119	1450415_at
Pde6b	View	View		929	-	1.90	44.67	2.93			PHOSPHODIESTERASE 6B, CGMP, ROD RECEPTOR, BETA POLYPEPTIDE	26492	27523	25086	13175	26492	593	25789	8796	chr5:108628694-108672034	1419740_at
Pde6c	View	View		264	0.14	-	0.13	0.11	Link		PHOSPHODIESTERASE 6C, CGMP SPECIFIC, CONE, ALPHA PRIME	2386	17230	826	1176	2386	17939	1606	14126	chr19:38198090-38248883	1450830_a_at
Pde6g	View	View		-	-	5.03	1.75	3.34	Link		PHOSPHODIESTERASE 6G, CGMP-SPECIFIC, ROD, GAMMA	33458	34101	28141	5597	33458	19145	30800	9233	chr11:120263700-120269573	1425100_a_at, 1450453_a_at
Pde6h	View	View		-	0.30	21.40	0.28	0.37	Link		PHOSPHODIESTERASE 6H, CGMP-SPECIFIC, CONE, GAMMA	7915	26118	6185	289	7915	28151	7050	18811	chr6:136918719-136933052	1450766_at, 1450765_a_at
Pdha1	View	View		-	0.63	-	0.33	-			PYRUVATE DEHYDROGENASE E1 ALPHA 1	582	928	1212	1250	582	1756	897	1270	chrX:155466324-155482441	1449137_at
Pdia3	View	View		441	-	0.78	0.06	-			PROTEIN DISULFIDE ISOMERASE ASSOCIATED 3	276	311	3888	4985	276	4843	2082	4633	chr2:121105386-121129419	1423423_at
Pdia5	View	View		212	1.28	13.21	8.72	10.39			PROTEIN DISULFIDE ISOMERASE ASSOCIATED 5	2293	1795	2048	155	2293	263	2171	209	chr16:35317205-35386404	1424650_at
Pex2	View	View		605	-	2.08	0.12	-			PEROXIN 2	374	210	3989	1917	374	3038	2182	1887	chr3:33142161-33274578	1438399_at
Pfkfb2	View	View		552	-	5.20	3.23	4.34			6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BIPHOSPHATASE 2	252	155	260	50	252	78	256	59	chr1:132516728-132543360	1431901_a_at, 1422090_a_at, 1429486_at, 1422091_at
Pfkl	View	View		-	1.44	1.40	1.97	2.16			PHOSPHOFRUCTOKINASE, LIVER, B-TYPE	5916	4109	3836	2747	5916	3006	4876	2253	chr10:77390400-77412878	1450269_a_at, 1439148_a_at
Pftk1	View	View		642	-	-	0.19	-			PFTAIRE PROTEIN KINASE 1	56	30	388	414	56	301	222	390	chr5:4809739-5386209	1453956_a_at
Phf20	View	View		-	-	-	0.32	-			PHD FINGER PROTEIN 20	362	434	1355	1678	362	1145	859	1371	chr2:155888172-155998877	1452259_at
Phr1	View	View		-	-	-	0.18	-			PAM, HIGHWIRE, RPM 1	101	100	472	527	101	548	287	540	chr14:101999559-102232127	1456715_at
Pik3ap1	View	View		-	-	-	0.11	-			PHOSPHOINOSITIDE-3-KINASE ADAPTOR PROTEIN 1	21	144	13	19	21	199	17	97	chr19:41327607-41429589	1421285_at, 1429831_at
Pik3r1	View	View		845	-	-	0.31	-			PHOSPHATIDYLINOSITOL 3-KINASE, REGULATORY SUBUNIT, POLYPEPTIDE 1 (P85 ALPHA)	401	501	1869	2307	401	1291	1135	1509	chr13:102781018-102868441	1438682_at
Pip5k1b	View	View		228	-	-	0.15	-			PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE, TYPE 1 BETA	166	223	858	929	166	1081	512	965	chr3:95145888-95191855	1455191_x_at, 1435039_a_at, 1426009_a_at
Pitpnc1	View	View		-	-	-	0.19	-			PHOSPHATIDYLINOSITOL TRANSFER PROTEIN, CYTOPLASMIC 1	38	15	319	199	38	196	179	285	chr11:107023982-107286810	1428879_at
Pitpnm3	View	View		-	-	2.15	7.56	4.74			PITPNM FAMILY MEMBER 3	3971	3784	3752	1744	3971	525	3862	814	chr11:71863723-71951973	1455140_at, 1458956_at
Pkp4	View	View		681	-	-	0.34	-			PLAKOPHILIN 4	372	355	864	1133	372	1110	618	1044	chr2:59015522-59156047	1438677_at
Plec1	View	View		-	0.70	0.28	0.36	0.25			PLECTIN 1	575	817	555	1957	575	1577	565	2256	chr15:75998231-76058633	1419835_s_at, 1434610_at
Plekha2	View	View		-	2.47	-	5.52	4.04			PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING, FAMILY A (PHOSPHOINOSITIDE BINDING SPECIFIC) MEMBER 2	685	277	341	510	685	124	513	127	chr8:26506385-26567739	1436177_at, 1417288_at
Plekha8	View	View		374	1.37	3.02	-	2.63			PLECKSTRIN HOMOLOGY DOMAIN CONTAINING, FAMILY A (PHOSPHOINOSITIDE BINDING SPECIFIC) MEMBER 8	2495	1816	3326	1101	2495	2264	2911	1105	chr6:54524689-54572670	1454819_at
Plekhf2	View	View		471	-	5.33	2.34	5.00			PLECKSTRIN HOMOLOGY DOMAIN CONTAINING, FAMILY F (WITH FYVE DOMAIN) MEMBER 2	636	528	1513	284	636	272	1075	215	chr4:10915810-10934717	1423862_at
Plekhh2	View	View		1135	-	-	0.10	-			PLECKSTRIN HOMOLOGY DOMAIN CONTAINING, FAMILY H (WITH MYTH4 DOMAIN) MEMBER 2	14	20	34	22	14	135	24	45	chr17:84420221-84530455	1427597_at
Pnn	View	View		1243	-	-	0.22	-			PININ	328	289	1238	1227	328	1474	783	1226	chr12:59985004-59991917	1423325_at
Pnp	View	View		289	-	-	0.21	0.27			PURINE-NUCLEOSIDE PHOSPHORYLASE	996	1043	1497	2094	996	4669	1247	4640	chr14:49777557-49875363	1416530_a_at, 1453299_a_at
Podxl	View	View		475	-	-	0.20	-			PODOCALYXIN-LIKE	78	68	254	242	78	388	166	258	chr6:31449656-31494074	1417396_at
Polg2	View	View		557	2.28	4.23	8.16	7.30			POLYMERASE (DNA DIRECTED), GAMMA 2, ACCESSORY SUBUNIT	3379	1484	2231	527	3379	414	2805	384	chr11:106584396-106595532	1450816_at
Ppap2c	View	View		-	1.87	5.65	14.29	7.55	Link		PHOSPHATIDIC ACID PHOSPHATASE TYPE 2C	3557	1906	4020	711	3557	249	3789	502	chr10:78929564-78936892	1451210_at
Ppargc1b	View	View		351	-	1.82	5.07	3.69			PEROXISOME PROLIFERATIVE ACTIVATED RECEPTOR, GAMMA, COACTIVATOR 1 BETA	3952	3616	2350	1292	3952	780	3151	853	chr18:61423505-61525800	1449945_at
Ppm1j	View	View		248	-	0.34	0.24	0.22			PROTEIN PHOSPHATASE 1J	522	607	481	1433	522	2218	502	2328	chr3:104909112-104914004	1453127_at
Ppp2r5e	View	View		282	2.63	-	3.86	-			PROTEIN PHOSPHATASE 2, REGULATORY SUBUNIT B (B56), EPSILON ISOFORM	1105	420	390	270	1105	286	748	385	chr12:76369721-76515040	1443533_at
Prcd	View	View		253	-	5.96	1.69	3.02		Link	PROGRESSIVE ROD-CONE DEGENERATION	9351	9679	8813	1479	9351	5543	9082	3004	chr11:116473308-116477593	1436657_at
Prdm1	View	View		3732	0.44	0.47	0.32	0.19			PR DOMAIN CONTAINING 1, WITH ZNF DOMAIN	501	1136	524	1123	501	1563	513	2748	chr10:44125592-44147163	1420425_at
Prmt1	View	View		420	-	-	0.21	-			PROTEIN ARGININE N-METHYLTRANSFERASE 1	810	734	3794	3961	810	3827	2302	3836	chr7:44844800-44854398	1452787_a_at
Prmt8	View	View		-	0.52	0.50	0.33	0.30			PROTEIN ARGININE N-METHYLTRANSFERASE 8	944	1808	942	1888	944	2819	943	3104	chr6:127654626-127734366	1435204_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Prom1	View	View		-	-	1.26	1.40	1.69	Link		PROMININ 1	23602	21904	20115	15936	23602	16881	21859	12965	chr5:44281869-44389964	1419700_a_at
Prpf19	View	View		-	-	-	0.17	-			PRP19/PSO4 PRE-MRNA PROCESSING FACTOR 19 HOMOLOG (S. CEREVISIAE)	243	258	960	1363	243	1397	602	1339	chr19:10955201-10972575	1460633_at
Prph1	View	View		437	-	0.19	-	-			PERIPHERIN 1	108	196	102	533	108	116	105	70	chr15:98883215-98887000	1422530_at
Prtg	View	View		691	0.54	0.36	0.28	0.44			PROTOGENIN HOMOLOG (GALLUS GALLUS)	397	735	185	512	397	1414	291	661	chr9:72606024-72710423	1456329_at
Psap	View	View		-	-	-	0.44	-			PROSAPOSIN	3369	3385	6099	6249	3369	7642	4734	6361	chr10:59673071-59697954	1421813_a_at
Ptgds	View	View		-	0.44	2.51	-	-			PROSTAGLANDIN D2 SYNTHASE (BRAIN)	4007	9182	7382	2936	4007	4234	5695	3914	chr2:25288721-25291758	1423859_a_at
Ptp4a3	View	View		446	-	0.62	2.11	-			PROTEIN TYROSINE PHOSPHATASE 4A3	8545	9382	5102	8225	8545	4049	6824	5468	chr15:73552053-73584482	1418181_at
Ptplad1	View	View		-	-	-	0.13	-			PROTEIN TYROSINE PHOSPHATASE-LIKE A DOMAIN CONTAINING 1	310	324	1621	1593	310	2445	966	1549	chr9:64784992-64819719	1452427_s_at
Pygm	View	View		663	0.15	-	0.39	0.19			MUSCLE GLYCOGEN PHOSPHORYLASE	1055	7204	799	1470	1055	2717	927	4887	chr19:6384429-6398459	1448602_at
Q3URA8_MOUSE	View	View		300	-	-	0.18	0.33			HYPOTHETICAL PROTEIN 6330405H19	213	358	252	337	213	1162	233	714	chr5:108611116-108612694	1436265_at
Q8CBC5_MOUSE	View	View		-	-	-	0.19	-			HYPOTHETICAL GENE SUPPORTED BY AK036329	49	44	37	71	49	257	43	131	chr18:74190471-74190953	1446217_at
Qscn6	View	View		-	-	-	0.11	0.24			QUIESCIN Q6	183	368	294	398	183	1709	239	985	chr1:157540373-157575117	1420831_at
Rab18	View	View		-	-	-	0.31	-			RAB18, MEMBER RAS ONCOGENE FAMILY	623	510	2002	2238	623	2025	1313	2402	chr18:6765203-6790229	1420899_at
Rabgef1	View	View		-	-	4.50	1.69	3.11			RAB GUANINE NUCLEOTIDE EXCHANGE FACTOR (GEF) 1	4573	3800	5458	1213	4573	2707	5016	1613	chr5:130471883-130499040	1419067_a_at, 1419069_at, 1419068_at
Rasal2	View	View		519	-	-	0.20	-			RAS PROTEIN ACTIVATOR LIKE 2	24	33	104	86	24	122	64	94	chr1:158977391-159248561	1444671_at
Rasgrf2	View	View		456	-	-	0.04	-			RAS PROTEIN-SPECIFIC GUANINE NUCLEOTIDE-RELEASING FACTOR 2	13	31	213	254	13	289	113	354	chr13:92358674-92462287	1421621_at
Rbp4	View	View		264	-	0.03	-	0.14			RETINOL BINDING PROTEIN 4, PLASMA	90	138	150	5259	90	155	120	833	chr19:38181773-38190392	1426225_at
Rcvrn	View	View		2128	-	17.55	1.52	3.11	Link		RECOVERIN	24722	27261	22206	1265	24722	16247	23464	7542	chr11:67511521-67519528	1450215_at
Rdh12	View	View		492	1.39	12.42	2.78	8.40	Link	Link	RETINOL DEHYDROGENASE 12	12548	9040	11861	955	12548	4517	12205	1453	chr12:80127754-80141501	1424256_at, 1431010_a_at
Rdh5	View	View		445	0.47	2.98	-	-			RETINOL DEHYDROGENASE 5	541	1154	1191	400	541	659	866	399	chr10:128316537-128322222	1418808_at
Rds	View	View		449	-	6.88	0.41	-		Link	RETINAL DEGENERATION, SLOW (RETINITIS PIGMENTOSA 7)	177	107	2086	303	177	427	1132	342	chr17:46373676-46388117	1420511_at
Reep6	View	View		-	-	34.01	16.93	40.04	Link		RECEPTOR ACCESSORY PROTEIN 6	19573	14211	15100	444	19573	1156	17337	433	chr10:79733360-79737930	1430128_a_at
Rgl3	View	View		-	-	0.25	0.13	-			RAL GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR-LIKE 3	219	356	281	1126	219	1738	250	1765	chr9:21721929-21739855	1431829_a_at
Rgr	View	View		237	0.33	3.91	-	-			RETINAL G PROTEIN COUPLED RECEPTOR	542	1666	2046	523	542	925	1294	501	chr14:35948731-35960205	1422832_at
Rgs20	View	View		-	-	3.32	-	-			REGULATOR OF G-PROTEIN SIGNALING 20	1407	1031	1487	448	1407	1350	1447	1087	chr1:4900326-5009507	1443694_at
Rgs9	View	View		445	-	-	-	-	Link	Link	REGULATOR OF G-PROTEIN SIGNALING 9	277	224	244	236	277	289	261	202	chr11:109041445-109114219	1418691_at
Rgs9bp	View	View		622	-	4.09	1.75	2.99	Link	Link	REGULATOR OF G-PROTEIN SIGNALLING 9 BINDING PROTEIN	9348	8361	8748	2139	9348	5354	9048	3023	chr7:35293267-35293980	1440256_at
Rhbdf2	View	View		-	-	0.11	-	-			RHOMBOID, VEINLET-LIKE 6 (DROSOPHILA)	264	91	17	149	264	216	141	70	chr11:116414259-116443109	1434774_at
Rho	View	View		1044	-	2.77	626.03	686.31	Link	Link	RHODOPSIN	40692	40160	38920	14064	40692	65	39806	58	chr6:115897546-115904449	1425172_at, 1451617_at, 1425171_at, 1451618_at
Rian	View	View		279	-	-	0.11	-			RNA IMPRINTED AND ACCUMULATED IN NUCLEUS	232	258	2776	2973	232	2198	1504	2168	chr12:110093969-110100035	1452899_at
Ric8b	View	View		1694	2.15	3.84	7.31	6.72			RESISTANCE TO INHIBITORS OF CHOLINESTERASE 8 HOMOLOG B (C. ELEGANS)	5397	2512	4017	1047	5397	738	4707	700	chr10:84347415-84446246	1435096_at
Rims1	View	View		543	-	-	1.54	-			REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS 1	3224	3900	2863	2765	3224	2096	3044	2524	chr1:22271402-22759999	1435667_at
Ris2	View	View		-	0.20	-	0.32	-			RETROVIRAL INTEGRATION SITE 2	133	673	116	200	133	414	125	237	chr8:125454116-125459644	1424144_at, 1424143_a_at
Rnf14	View	View		1299	-	-	0.30	-			RING FINGER PROTEIN 14	499	393	1710	1837	499	1688	1105	1943	chr18:38422658-38443821	1431030_a_at
Rnf149	View	View		-	-	-	0.33	0.52			RING FINGER PROTEIN 149	414	697	1606	1848	414	1256	1010	1939	chr1:39495847-39521951	1429321_at
Rnf25	View	View		408	-	-	0.15	-			RING FINGER PROTEIN 25	166	146	915	962	166	1085	541	972	chr1:74526960-74534604	1448674_at
Rom1	View	View		1095	-	1.96	3.19	2.21		Link	ROD OUTER SEGMENT MEMBRANE PROTEIN 1	19815	17812	17650	8994	19815	6218	18733	8492	chr19:8994443-8996401	1448996_at
Rp1h	View	View		830	-	2.63	2.97	3.41		Link	RETINITIS PIGMENTOSA 1 HOMOLOG (HUMAN)	12129	11175	11985	4556	12129	4081	12057	3532	chr1:4334224-4350473	1424963_at
Rpe65	View	View		485	0.28	5.01	0.47	-			RETINAL PIGMENT EPITHELIUM 65	124	437	972	194	124	262	548	110	chr3:159535602-159560092	1450197_at
Rpgr	View	View		298	-	-	0.61	-			RETINITIS PIGMENTOSA GTPASE REGULATOR	674	637	856	904	674	1099	765	1113	chrX:9194936-9373697	1427467_a_at
Rpgrip1	View	View		596	-	5.12	0.39	-	Link	Link	RETINITIS PIGMENTOSA GTPASE REGULATOR INTERACTING PROTEIN 1	1422	1551	2736	534	1422	3602	2079	1136	chr14:51032873-51082881	1451785_at, 1421144_at, 1454231_a_at, 1431357_a_at
Rps6ka2	View	View		-	-	-	2.48	2.11			RIBOSOMAL PROTEIN S6 KINASE, RELATED SEQUENCE 1	5835	6780	3892	3346	5835	2351	4864	2301	chr17:7019773-7152975	1417542_at
Rs1h	View	View		287	-	16.42	0.26	-	Link	Link	RETINOSCHISIS 1 HOMOLOG (HUMAN)	579	451	3925	239	579	2214	2252	504	chrX:156112118-156143768	1421085_at, 1421084_at
Rtbdn	View	View		-	-	12.72	-	10.14	Link		RETBINDIN	15475	17630	11324	890	15475	14707	13400	1321	chr8:87837096-87846708	1451603_at
Rtn1	View	View		342	-	-	2.08	-			RETICULON 1	6607	7294	3848	4526	6607	3169	5228	3672	chr12:73130586-73327777	1429761_at
Rtn4	View	View		521	-	-	0.23	-	Link		RETICULON 4	3003	2253	12304	11194	3003	13133	7654	12897	chr11:29592955-29644255	1421116_a_at
Rufy3	View	View		889	-	-	0.29	-			RUN AND FYVE DOMAIN CONTAINING 3	1714	1695	5743	6415	1714	5870	3729	4819	chr5:89639710-89724536	1424402_at
Rwdd4a	View	View		250	-	2.19	-	-			RWD DOMAIN CONTAINING 4A	4102	3959	8075	3688	4102	3507	6089	3046	chr8:49032509-49049544	1457983_s_at
Rxrg	View	View		405	-	0.15	0.18	0.23			RETINOID X RECEPTOR GAMMA	182	329	204	1325	182	988	193	844	chr1:169435059-169476298	1418782_at
Sag	View	View		325	-	-	-	1.26	Link		RETINAL S-ANTIGEN	35796	38136	35681	28028	35796	32205	35739	28426	chr1:89634851-89676194	1419025_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Samd7	View	View		1013	-	0.33	-	15.73			STERILE ALPHA MOTIF DOMAIN CONTAINING 7	748	833	1832	5494	748	730	1290	82	chr3:30937131-30958004	1455782_at
Scamp1	View	View		355	-	-	0.32	-			RIKEN CDNA 4930505M11 GENE	482	418	1579	1531	482	1527	1031	1697	chr13:95302187-95385980	1453054_at
Scg3	View	View		-	0.70	0.72	0.44	0.44			SECRETOGRANIN III	5147	7321	5127	7142	5147	11604	5137	11553	chr9:75429283-75469926	1448628_at
Sec14l2	View	View		681	1.57	2.35	2.99	3.50			SEC14-LIKE 2 (S. CEREVISIAE)	1134	724	586	249	1134	379	860	246	chr11:3997034-4018732	1424530_at
Sec22c	View	View		-	-	-	3.10	3.23			SEC22 VESICLE TRAFFICKING PROTEIN-LIKE 3 (S. CEREVISIAE)	2300	1995	893	620	2300	743	1597	495	chr9:121531768-121553727	1436102_at
Sema6d	View	View		1094	-	0.27	-	-			SEMA6D	624	557	562	2088	624	500	593	729	chr2:124301737-124359213	1453055_at
Sema7a	View	View		870	-	-	0.05	-			SEMA DOMAIN, IMMUNOGLOBULIN DOMAIN (IG), AND GPI MEMBRANE ANCHOR, (SEMAPHORIN) 7A	6	17	182	163	6	133	94	139	chr9:57738272-57761002	1422040_at
Serinc1	View	View		-	-	-	0.43	-			SERINE INCORPORATOR 1	3193	2826	8453	8597	3193	7453	5823	8372	chr10:57204197-57220919	1437513_a_at
Serpina3n	View	View		-	-	0.21	-	-			SERINE (OR CYSTEINE) PEPTIDASE INHIBITOR, CLADE A, MEMBER 3N	116	230	475	2215	116	84	296	372	chr12:104807779-104815378	1419100_at
Serping1	View	View		-	-	0.17	-	0.32			SERINE (OR CYSTEINE) PEPTIDASE INHIBITOR, CLADE G, MEMBER 1	425	437	204	1180	425	502	315	986	chr2:84566224-84576243	1416625_at
Sfrs1	View	View		916	-	-	0.46	-			SPLICING FACTOR, ARGININE/SERINE-RICH 1 (ASF/SF2)	2704	2333	5665	5700	2704	5819	4185	5668	chr11:87863880-87867803	1452430_s_at
Sgcg	View	View		358	-	262.50	-	-			SARCOGLYCAN, GAMMA (DYSTROPHIN-ASSOCIATED GLYCOPROTEIN)	9	18	525	2	9	1	267	11	chr14:60175169-60212543	1437523_s_at, 1421254_a_at
Sh2d1a	View	View		325	6.63	140.33	33.13	171.50			SH2 DOMAIN PROTEIN 1A	265	40	421	3	265	8	343	2	chrX:38747189-38766724	1449393_at
Six6os1	View	View		1081	0.69	0.60	0.22	0.27			SIX6 OPPOSITE STRAND TRANSCRIPT 1	977	1412	1477	2455	977	4344	1227	4498	chr12:73799947-73836603	1431393_at, 1431896_at
Slc16a6	View	View		358	-	2.91	6.77	-			SOLUTE CARRIER FAMILY 16 (MONOCARBOXYLIC ACID TRANSPORTERS), MEMBER 6	1306	1312	422	145	1306	193	864	142	chr11:109266945-109289686	1417884_at
Slc17a1	View	View		-	-	13.40	-	-			SOLUTE CARRIER FAMILY 17 (SODIUM PHOSPHATE), MEMBER 1	513	598	536	40	513	679	525	312	chr13:23877797-23903195	1417280_at
Slc17a7	View	View		311	-	2.61	1.50	1.77			SOLUTE CARRIER FAMILY 17 (SODIUM-DEPENDENT INORGANIC PHOSPHATE COTRANSPORTER), MEMBER 7	9150	7766	6765	2594	9150	6085	7958	4496	chr7:45032065-45043086	1428986_at
Slc1a1	View	View		276	-	-	0.18	-			SOLUTE CARRIER FAMILY 1 (NEURONAL/EPITHELIAL HIGH AFFINITY GLUTAMATE TRANSPORTE , SYSTEM XAG), MEMBER 1 [+/-]Show full name	87	105	609	615	87	484	348	381	chr19:28901132-28979956	1425415_a_at, 1460386_a_at
Slc24a1	View	View		778	1.57	17.69	14.73	111.40	Link		SOLUTE CARRIER FAMILY 24 (SODIUM/POTASSIUM/CALCIUM EXCHANGER), MEMBER 1	5670	3604	15495	876	5670	385	10583	95	chr9:64720865-64749613	1451647_at
Slc24a4	View	View		-	0.35	-	0.28	0.27			SOLUTE CARRIER FAMILY 24 (SODIUM/POTASSIUM/CALCIUM EXCHANGER), MEMBER 4	308	876	453	465	308	1113	381	1421	chr12:102530469-102667799	1435206_at
Slc25a25	View	View		388	-	3.11	2.10	3.52			SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER, PHOSPHATE CARRIER), MEMBER 25	1674	1645	1578	507	1674	799	1626	462	chr2:32236493-32273431	1424735_at
Slc26a4	View	View		314	-	0.15	-	0.17			SOLUTE CARRIER FAMILY 26, MEMBER 4	26	36	34	231	26	51	30	174	chr12:32105579-32145728	1419725_at
Slc2a4	View	View		316	-	-	0.13	0.16			SOLUTE CARRIER FAMILY 2 (FACILITATED GLUCOSE TRANSPORTER), MEMBER 4	14	42	37	52	14	109	26	160	chr11:69758738-69764344	1415959_at
Slc38a1	View	View		1332	0.49	0.73	0.59	0.55			SOLUTE CARRIER FAMILY 38, MEMBER 1	5279	10798	5603	7650	5279	8953	5441	9866	chr15:96404032-96470947	1454764_s_at, 1415903_at
Slc6a6	View	View		-	-	1.96	0.66	-			SOLUTE CARRIER FAMILY 6 (NEUROTRANSMITTER TRANSPORTER, TAURINE), MEMBER 6	7260	9211	10896	5549	7260	11053	9078	9098	chr6:91649599-91724570	1437149_at, 1421346_a_at
Slc8a3	View	View		518	-	-	0.14	0.47			SOLUTE CARRIER FAMILY 8 (SODIUM/CALCIUM EXCHANGER), MEMBER 3	173	311	381	296	173	1210	277	588	chr12:82118342-82252028	1450311_at, 1440962_at
Slco4a1	View	View		-	-	3.14	3.67	7.91	Link		SOLUTE CARRIER ORGANIC ANION TRANSPORTER FAMILY, MEMBER 4A1	2905	2407	1775	565	2905	791	2340	296	chr2:180385742-180404260	1455803_at, 1438160_x_at
Slit3	View	View		444	0.10	-	-	-			SLIT HOMOLOG 3 (DROSOPHILA)	31	325	26	21	31	52	29	11	chr11:34964938-35551565	1452296_at
Smad3	View	View		750	-	-	0.13	-			MAD HOMOLOG 3 (DROSOPHILA)	20	48	88	146	20	153	54	147	chr9:63444773-63556000	1450471_at
Smarcb1	View	View		-	-	-	0.27	-			SWI/SNF RELATED, MATRIX ASSOCIATED, ACTIN DEPENDENT REGULATOR OF CHROMATIN, SUBFAMILY B, MEMBER 1	305	469	577	382	305	1131	441	977	chr10:75340491-75365312	1435856_x_at
Smoc2	View	View		321	-	0.07	-	-			SPARC RELATED MODULAR CALCIUM BINDING 2	79	80	88	1184	79	94	84	125	chr17:14016132-14138248	1415935_at, 1431362_a_at
Smpdl3a	View	View		-	0.35	0.34	0.19	0.14			SPHINGOMYELIN PHOSPHODIESTERASE, ACID-LIKE 3A	180	516	218	639	180	955	199	1375	chr10:57483015-57500236	1416635_at
Smug1	View	View		654	0.25	2.80	0.43	-			SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE	2173	8769	2502	895	2173	5061	2338	1727	chr15:102981341-102985963	1428763_at
Snapc4	View	View		-	-	-	0.15	-			SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 4	16	28	65	76	16	110	41	48	chr2:26184783-26202628	1441795_at
Snrpn	View	View		972	-	-	0.49	-			SMALL NUCLEAR RIBONUCLEOPROTEIN N	4709	4211	9825	9740	4709	9685	7267	9826	chr7:59862190-59866513	1421063_s_at
Snta1	View	View		772	-	2.40	3.01	4.21			SYNTROPHIN, ACIDIC 1	1314	1205	999	417	1314	437	1157	275	chr2:154067769-154099522	1416825_at
Sntg2	View	View		-	-	8.42	3.18	8.03			SYNTROPHIN, GAMMA 2	506	345	522	62	506	159	514	64	chr12:30761046-30959380	1418789_at
Snx15	View	View		-	-	-	0.19	-			SORTING NEXIN 15	21	51	88	96	21	113	55	81	chr19:6119399-6128215	1456649_at
Socs3	View	View		-	-	0.12	0.17	-			SUPPRESSOR OF CYTOKINE SIGNALING 3	138	250	113	909	138	835	126	61	chr11:117782179-117785276	1455899_x_at, 1456212_x_at, 1416576_at
Spop	View	View		1376	-	-	0.28	-			SPECKLE-TYPE POZ PROTEIN	735	695	2103	1338	735	2671	1419	2764	chr11:95230204-95309103	1447827_x_at
Srp72	View	View		288	-	-	0.28	0.50			SIGNAL RECOGNITION PARTICLE 72	977	1062	3014	3527	977	3531	1996	3963	chr5:78049483-78074707	1428877_at
Srpk2	View	View		-	-	-	0.33	-			SERINE/ARGININE-RICH PROTEIN SPECIFIC KINASE 2	525	686	1604	1612	525	1607	1065	1391	chr5:23019360-23077091	1417136_s_at
St3gal1	View	View		251	-	2.89	5.15	-			ST3 BETA-GALACTOSIDE ALPHA-2,3-SIALYLTRANSFERASE 1	206	108	202	70	206	40	204	49	chr15:66932544-66943661	1418946_at
St3gal3	View	View		-	-	0.28	0.11	0.28			ST3 BETA-GALACTOSIDE ALPHA-2,3-SIALYLTRANSFERASE 3	130	187	208	742	130	1161	169	603	chr4:117430086-117632822	1421915_a_at, 1450406_a_at
St8sia1	View	View		365	-	6.30	5.47	5.58			ST8 ALPHA-N-ACETYL-NEURAMINIDE ALPHA-2,8-SIALYLTRANSFERASE 1	235	173	189	30	235	43	212	38	chr6:142778763-142921674	1419695_at, 1455695_at, 1419694_at
Stard7	View	View		606	-	2.67	2.10	2.48			START DOMAIN CONTAINING 7	8276	6524	8047	3009	8276	3941	8162	3291	chr2:126961680-126990381	1449628_s_at
Steap4	View	View		413	-	0.13	-	-			STEAP FAMILY MEMBER 4	20	19	24	182	20	42	22	19	chr5:7966478-7988219	1460197_a_at
Stk17b	View	View		464	4.45	5.68	7.44	13.39			SERINE/THREONINE KINASE 17B (APOPTOSIS-INDUCING)	409	92	341	60	409	55	375	28	chr1:53700057-53729699	1450997_at
Stk35	View	View		628	-	2.69	3.49	2.46			SERINE/THREONINE KINASE 35	4620	4316	7181	2667	4620	1325	5901	2398	chr2:129492002-129523728	1439802_at
Stk36	View	View		408	-	-	0.13	-			SERINE/THREONINE KINASE 36 (FUSED HOMOLOG, DROSOPHILA)	15	10	11	9	15	114	13	37	chr1:74534662-74570103	1453584_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Stom	View	View		-	-	1.55	0.29	-			STOMATIN	301	293	584	376	301	1049	443	432	chr2:35135999-35159018	1419098_at, 1449341_a_at, 1419099_x_at
Supt16h	View	View		304	-	-	0.16	-			SUPPRESSOR OF TY 16 HOMOLOG (S. CEREVISIAE)	101	66	712	716	101	627	407	671	chr14:51082365-51119152	1449578_at
Susd3	View	View		-	1.51	45.63	21.62	93.97			SUSHI DOMAIN CONTAINING 3	3589	2381	2236	49	3589	166	2913	31	chr13:49242627-49260643	1428975_at
Syt1	View	View		482	-	-	0.29	-			SYNAPTOTAGMIN I	1866	1706	5884	6683	1866	6437	3875	6921	chr10:107901762-108415063	1421990_at, 1431191_a_at
Taf4b	View	View		781	4.44	1.78	5.97	4.53			TAF4B RNA POLYMERASE II, TATA BOX BINDING PROTEIN (TBP)-ASSOCIATED FACTOR	1599	360	838	472	1599	268	1219	269	chr18:14984630-15043377	1435303_at
Tagln2	View	View		1235	-	0.20	-	-			TRANSGELIN 2	58	65	39	200	58	17	49	27	chr1:174336722-174344047	1439407_x_at
Taok3	View	View		-	-	-	0.17	-			TAO KINASE 3	23	10	85	60	23	133	54	83	chr5:117381159-117534864	1436261_at
Tbc1d2	View	View		1135	-	-	0.14	-			TBC1 DOMAIN FAMILY, MEMBER 2	18	25	19	15	18	130	19	12	chr4:46625490-46671299	1456792_at
Tdrd7	View	View		476	1.52	2.94	3.46	4.99			TUDOR DOMAIN CONTAINING 7	9477	6228	9100	3094	9477	2741	9289	1862	chr4:46008560-46055861	1426716_at
Tecta	View	View		694	-	0.04	-	-			TECTORIN ALPHA	17	29	54	1329	17	38	36	37	chr9:42080617-42150924	1419632_at
Tef	View	View		-	-	-	0.27	-			THYROTROPH EMBRYONIC FACTOR	355	291	795	896	355	1292	575	955	chr15:81630072-81654118	1450184_s_at
Tgm3	View	View		-	-	7.30	-	-			TRANSGLUTAMINASE 3, E POLYPEPTIDE	58	53	416	57	58	46	237	22	chr2:129703790-129740002	1440150_at
Thoc3	View	View		-	-	-	0.09	-			THO COMPLEX 3	44	38	423	495	44	468	234	483	chr13:54469140-54478441	1423971_at
Thoc5	View	View		434	-	3.14	4.41	4.52			FMS INTERACTING PROTEIN	3538	3352	1977	630	3538	802	2758	610	chr11:4795346-4828868	1452672_at
Thrap2	View	View		978	1.41	1.57	4.42	2.65			THYROID HORMONE RECEPTOR ASSOCIATED PROTEIN 2	5362	3801	1769	1124	5362	1214	3566	1345	chr5:118821773-119024010	1434603_at
Timm44	View	View		634	1.95	-	3.21	-			TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 44	4116	2108	1344	1134	4116	1281	2730	1211	chr8:4259888-4275895	1439371_x_at
Tkt	View	View		-	-	-	0.31	-			TRANSKETOLASE	1350	1257	4482	4751	1350	4376	2916	4533	chr14:29378158-29403731	1451015_at, 1439443_x_at
Tmed9	View	View		342	-	-	0.28	-			TRANSMEMBRANE EMP24 PROTEIN TRANSPORT DOMAIN CONTAINING 9	648	543	2109	2127	648	2335	1379	2063	chr13:55602765-55607310	1448268_at
Tmem108	View	View		-	-	1.71	3.40	4.03			TRANSMEMBRANE PROTEIN 108	1402	1116	864	505	1402	412	1133	281	chr9:103342589-103619967	1454729_at
Tmem136	View	View		297	-	5.96	1.58	4.41			TRANSMEMBRANE PROTEIN 136	3877	2581	4293	720	3877	2459	4085	926	chr9:42859648-42867565	1457701_at
Tmem142a	View	View		1539	-	-	0.27	-			TRANSMEMBRANE PROTEIN 142A	272	616	320	457	272	1023	296	540	chr5:123275691-123290773	1424990_at
Tmem20	View	View		493	0.40	0.44	0.18	0.20			TRANSMEMBRANE PROTEIN 20	157	397	248	568	157	895	203	1015	chr19:38461124-38470751	1435452_at
Tmem26	View	View		1080	0.18	-	-	-			TRANSMEMBRANE PROTEIN 26	517	2818	182	110	517	641	350	198	chr10:68119103-68175968	1435409_at
Tmlhe	-	-		-	-	6.91	-	2.56			TRIMETHYLLYSINE HYDROXYLASE, EPSILON	404	279	608	88	404	483	506	198	chrX	1420726_x_at, 1420725_at, 1420727_a_at
Tmod1	View	View		-	-	0.16	-	-			TROPOMODULIN 1	132	118	80	508	132	117	106	245	chr4:46082066-46135904	1422754_at
Tnfaip3	View	View		475	0.68	11.30	4.77	10.49			TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3	1031	1507	1989	176	1031	216	1510	144	chr10:18690335-18704826	1450829_at, 1433699_at
Tnfrsf12a	View	View		319	-	0.04	-	0.03			TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY, MEMBER 12A	26	99	48	1337	26	112	37	1448	chr17:23403063-23405066	1418571_at, 1418572_x_at
Tnfsf13	View	View		212	-	3.01	-	2.33			TUMOR NECROSIS FACTOR (LIGAND) SUPERFAMILY, MEMBER 13	2295	2597	2287	759	2295	1951	2291	985	chr11:69498772-69512293	1418345_at
Tnnt2	View	View		-	-	-	5.38	-			TROPONIN T2, CARDIAC	129	127	14	32	129	24	72	8	chr1:137657286-137668671	1418726_a_at, 1424967_x_at
Tnpo1	View	View		261	-	-	2.35	2.21			TRANSPORTIN 1	6650	7278	4324	3514	6650	2827	5487	2483	chr13:99942895-100026541	1433585_at
Tob1	View	View		1326	-	-	0.43	0.55			TRANSDUCER OF ERBB-2.1	3790	4684	4340	5200	3790	8912	4065	7429	chr11:94027544-94031585	1423176_at, 1440844_at
Tom1l2	View	View		224	-	-	0.20	-			TARGET OF MYB1-LIKE 2 (CHICKEN)	105	108	222	256	105	526	164	283	chr11:60046211-60169079	1451795_at
Traf3ip3	View	View		247	2.50	13.61	-	5.34			TRAF3 INTERACTING PROTEIN 3	513	205	449	33	513	226	481	90	chr1:194876230-194902210	1434573_at
Trak2	View	View		-	-	-	0.17	0.34			TRAFFICKING PROTEIN, KINESIN BINDING 2	66	77	229	291	66	378	148	437	chr1:58844996-58917976	1429607_at
Trappc3	View	View		261	-	-	0.16	-			TRAFFICKING PROTEIN PARTICLE COMPLEX 3	515	543	3113	2932	515	3246	1814	3331	chr4:125764709-125778187	1416771_at
Trim17	View	View		357	-	-	0.20	-			TRIPARTITE MOTIF PROTEIN 17	44	95	51	58	44	218	48	63	chr11:58770880-58789293	1427507_at
Trim36	View	View		-	-	-	5.21	5.04			TRIPARTITE MOTIF-CONTAINING 36	745	335	697	226	745	143	721	143	chr18:46291176-46337856	1441969_at
Trp53	View	View		-	-	0.44	0.19	-			TRANSFORMATION RELATED PROTEIN 53	25	46	86	196	25	135	56	189	chr11:69396600-69407992	1426538_a_at
Tspan33	View	View		454	-	-	0.17	-			TETRASPANIN 33	34	63	118	158	34	200	76	224	chr6:29644266-29668572	1451609_at
Tspan7	View	View		326	-	-	0.46	-			TETRASPANIN 7	4596	3871	8080	6346	4596	10093	6338	7943	chrX:9642075-9753565	1417502_at
Tspan9	View	View		1232	-	0.45	0.17	0.33			TETRASPANIN 9	63	61	138	308	63	380	101	303	chr6:127927019-128109197	1441968_at
ttc21a	View	View		-	-	18.45	-	-			TETRATRICOPEPTIDE REPEAT DOMAIN 21A	140	82	203	11	140	61	172	23	chr9:119786304-119816491	1442472_at, 1441218_at
Ttc9c	View	View		246	-	-	0.20	-			TETRATRICOPEPTIDE REPEAT DOMAIN 9C	182	245	305	354	182	898	244	416	chr19:8878341-8886333	1432245_s_at, 1434001_at, 1430569_at
Ttr	View	View		1097	0.47	2.48	-	3.38			TRANSTHYRETIN	7409	15626	13758	5546	7409	8176	10584	3131	chr18:20808423-20817331	1454608_x_at, 1451580_a_at, 1459737_s_at, 1455913_x_at
Ttyh2	View	View		-	-	-	0.17	0.19			TWEETY HOMOLOG 2 (DROSOPHILA)	81	64	50	195	81	469	66	339	chr11:114491558-114537074	1421179_at
Tub	View	View		-	-	1.65	2.27	2.65			TUBBY CANDIDATE GENE	5228	4758	3968	2401	5228	2305	4598	1732	chr7:108741785-108825636	1420925_at
Tubb6	View	View		-	-	0.08	-	-			TUBULIN, BETA 6	54	91	32	390	54	65	43	149	chr18:67516088-67528117	1416431_at
Tulp1	View	View		-	-	1.81	-	-	Link	Link	TUBBY LIKE PROTEIN 1	21316	21597	16140	8907	21316	16709	18728	14692	chr17:28079105-28092737	1451582_at
Txndc13	View	View		-	-	-	0.17	-			THIOREDOXIN DOMAIN CONTAINING 13	76	86	504	526	76	449	290	453	chr2:134285949-134335562	1453787_at
Txnip	View	View		550	-	-	0.08	-			THIOREDOXIN INTERACTING PROTEIN	19	16	159	264	19	245	89	109	chr3:96643362-96655007	1415997_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
Txnl6	View	View		614	-	22.06	3.49	29.76			THIOREDOXIN-LIKE 6	4172	3558	1125	51	4172	1197	2649	89	chr8:74489544-74495590	1425696_at
U2af1	View	View		304	-	-	0.27	-			U2 SMALL NUCLEAR RIBONUCLEOPROTEIN AUXILIARY FACTOR (U2AF) 1	827	758	3263	3181	827	3023	2045	3073	chr17:31375793-31387432	1422509_at
Uckl1	View	View		-	-	3.46	-	-			URIDINE-CYTIDINE KINASE 1-LIKE 1	6121	5366	5425	1569	6121	5307	5773	4641	chr2:181498559-181511380	1424646_at
Unc119	View	View		879	-	1.42	1.29	1.30	Link	Link	UNC-119 HOMOLOG (C. ELEGANS)	27076	28427	25073	17674	27076	20962	26075	19985	chr11:78159717-78165351	1418123_at
Ush1g	View	View		264	NA	NA	NA	NA			USHER SYNDROME 1G HOMOLOG (HUMAN)									chr11:115134071-115137946
Ush2a	View	View		1126	-	-	-	-	Link		USHER SYNDROME 2A (AUTOSOMAL RECESSIVE, MILD) HOMOLOG (HUMAN)									chr1:189962811-190665716
Ush3a	View	View		779	-	-	-	-		Link	USHER SYNDROME 3A HOMOLOG (HUMAN)	59	70	149	184	59	154	104	172	chr3:58933144-58973141	1438347_at
Usp2	View	View		310	0.45	0.60	0.75	-			UBIQUITIN SPECIFIC PEPTIDASE 2	2712	6053	2015	3333	2712	3621	2364	2865	chr9:43818134-43845472	1417168_a_at
Vamp4	View	View		-	-	0.64	0.43	0.49			VESICLE-ASSOCIATED MEMBRANE PROTEIN 4	2383	3065	3011	4698	2383	5565	2697	5531	chr1:164407398-164435753	1422895_at
Vax2os1	View	View		457	1.53	5.70	6.83	21.68	Link		VAX2 OPPOSITE STRAND TRANSCRIPT 1	1229	805	1373	241	1229	180	1301	60	chr6:83667784-83676590	1446754_a_at, 1443232_at
Vps35	View	View		565	-	-	0.26	-			VACUOLAR PROTEIN SORTING 35	326	357	1521	1547	326	1246	924	1592	chr8:88151235-88185062	1415784_at
Vtn	View	View		661	-	22.51	1.52	6.90	Link		VITRONECTIN	17518	16702	13575	603	17518	11532	15547	2254	chr11:78315315-78318518	1420484_a_at, 1455098_a_at
Wdfy1	View	View		-	5.77	-	0.55	-			WD REPEAT AND FYVE DOMAIN CONTAINING 1	1229	213	2142	2264	1229	2219	1686	2470	chr1:79584403-79601262	1437358_at, 1435588_at
Wdr17	View	View		-	-	1.96	2.00	2.25			WD REPEAT DOMAIN 17	7037	6153	3810	1948	7037	3523	5424	2408	chr8:56128319-56223065	1435392_at
Wdr31	View	View		608	0.50	4.02	0.21	-			WD REPEAT DOMAIN 31	639	1281	1607	400	639	2992	1123	1323	chr4:61940095-61957238	1423636_at, 1459664_at
Wdr63	View	View		205	-	69.67	-	-			WD REPEAT DOMAIN 63	36	38	209	3	36	18	123	11	chr3:145977913-146045422	1436675_at
Wdr66	View	View		-	-	25.12	-	27.39			WD REPEAT DOMAIN 66	833	1114	427	17	833	600	630	23	chr5:123532219-123587412	1430112_at
Wisp1	View	View		-	1.69	28.03	59.17	25.93			WNT1 INDUCIBLE SIGNALING PATHWAY PROTEIN 1	1361	804	869	31	1361	23	1115	43	chr15:66721062-66752868	1448594_at, 1448593_at
Wwc1	View	View		285	-	0.24	0.16	-			WW, C2 AND COILED-COIL DOMAIN CONTAINING 1	212	498	257	1069	212	1357	235	2217	chr11:35681827-35823890	1420008_s_at, 1427261_at
Ykt6	View	View		-	-	-	0.16	0.41			YKT6 HOMOLOG (S. CEREVISIAE)	184	186	667	724	184	1159	426	1032	chr11:5855835-5867785	1460191_at
Ypel2	View	View		602	-	-	5.78	-			YIPPEE-LIKE 2 (DROSOPHILA)	439	272	160	111	439	76	300	107	chr11:86756305-86809902	1440560_at
Ywhab	View	View		-	-	-	0.28	-			TYROSINE 3-MONOOXYGENASE/TRYPTOPHAN 5-MONOOXYGENASE ACTIVATION PROTEIN, BETA POLYPEPTIDE	357	368	2508	2445	357	1269	1433	2312	chr2:163686638-163710028	1420878_a_at
Ywhag	View	View		516	-	-	0.09	-			3-MONOOXYGENASE/TRYPTOPHAN 5-MONOOXYGENASE ACTIVATION PROTEIN, GAMMA POLYPEPTIDE	58	51	614	745	58	617	336	667	chr5:136193038-136219180	1420816_at
Zbtb7c	View	View		554	-	0.09	-	-			ZINC FINGER AND BTB DOMAIN CONTAINING 7C	81	110	17	189	81	60	49	21	chr18:75945543-76273929	1436365_at
Zc3h11a	View	View		736	-	-	0.31	-			ZINC FINGER CCCH TYPE CONTAINING 11A	334	328	833	772	334	1067	584	851	chr1:135449041-135488902	1426361_at
Zdhhc14	View	View		276	0.29	0.37	0.38	0.36			ZINC FINGER, DHHC DOMAIN CONTAINING 14	1219	4169	403	1096	1219	3210	811	2244	chr17:5449082-5710373	1437614_x_at, 1438619_x_at, 1438975_x_at, 1423668_at
Zfp146	View	View		-	-	-	0.16	-			ZINC FINGER PROTEIN 146	74	68	452	455	74	453	263	427	chr7:29870034-29878487	1422135_at
Zfp316	View	View		-	-	-	0.19	-			ZINC FINGER PROTEIN 316	45	34	251	268	45	239	148	295	chr5:143516867-143529793	1450151_at
Zfp36l2	View	View		-	-	2.58	5.31	6.39			ZINC FINGER PROTEIN 36, C3H TYPE-LIKE 2	3880	3168	3410	1323	3880	731	3645	570	chr17:84092250-84096273	1437626_at
Zfp664	View	View		-	-	-	0.12	-			ZINC FINGER PROTEIN 664	23	47	204	201	23	198	114	160	chr5:125151743-125191672	1437047_at
Zfyve28	View	View		245	4.29	6.18	8.18	8.83			ZINC FINGER, FYVE DOMAIN CONTAINING 28	695	162	346	56	695	85	521	59	chr5:34511729-34605183	1443669_at, 1434504_at
1425288_at	-	-		-	-	3.35	14.18	41.66			STERILE ALPHA MOTIF DOMAIN CONTAINING 11	7855	6558	6475	1930	7855	554	7165	172	-	1425288_at
1435462_at	-	-		-	-	1.79	2.46	-			HYPOTHETICAL LOC433022	6785	6066	2974	1658	6785	2763	4880	2134	-	1435462_at
1435819_at	-	-		-	-	0.28	-	0.38			HYPOTHETICAL LOC230602	250	286	375	1323	250	271	313	826	-	1435819_at
1436287_at	-	-		-	1.85	10.97	-	8.76			,GB:BF466943 /DB_XREF=GI:11536126 /DB_XREF=UI-M-CG0P-BRB-G-11-0-UI.S1 /CLONE=UI M-CG0P-BRB-G-11-0-UI /FEA=EST /CNT=10 /TID=MM.58847.1 /TIER=STACK /STK=10 /UG=MM.58847 /UG_TITLE=ESTS [+/-]Show full name	277	150	318	29	277	223	298	34	-	1436287_at
1436633_at	-	-		-	0.50	3.17	0.13	0.24			GENE MODEL 1567, (NCBI)	159	316	279	88	159	1212	219	897	-	1436633_at
1437003_at	-	-		-	2.14	3.60	3.45	3.76			,GB:BB323930 /DB_XREF=GI:16403486 /DB_XREF=BB323930 /CLONE=B430101L16 /FEA=EST CNT=35 /TID=MM.17706.1 /TIER=STACK /STK=30 /UG=MM.17706 /UG_TITLE=ESTS [+/-]Show full name	1297	607	953	265	1297	376	1125	299	-	1437003_at
1438068_at	View	View		300	-	-	0.15	0.27			,GB:BB251859 /DB_XREF=GI:8944605 /DB_XREF=BB251859 /CLONE=A730048G08 /FEA=EST / NT=21 /TID=MM.100454.1 /TIER=STACK /STK=12 /UG=MM.100454 /UG_TITLE=ESTS [+/-]Show full name	192	284	348	455	192	1266	270	982	chr5:108605857-108606670	1438068_at
1439911_at	View	View		205	0.38	-	0.18	0.14			SIMILAR TO SYNDECAN 2	136	356	292	322	136	744	214	1546	chr15:32736771-32743720	1439911_at
1439936_at	View	View		543	0.21	5.12	0.30	-			,GB:BE949265 /DB_XREF=GI:10527024 /DB_XREF=UI-M-BH3-AVF-A-04-0-UI.S1 /CLONE=UI- -BH3-AVF-A-04-0-UI /FEA=EST /CNT=7 /TID=MM.150542.1 /TIER=CONSEND /STK=6 /UG=MM.150542 /UG_TITLE=ESTS [+/-]Show full name	398	1863	471	92	398	1343	435	356	chr17:45194709-45195799	1439936_at
1441518_at	View	View		-	2.46	11.76	3.31	10.78			,GB:BB277231 /DB_XREF=GI:16400956 /DB_XREF=BB277231 /CLONE=A930003C13 /FEA=EST CNT=4 /TID=MM.115892.1 /TIER=CONSEND /STK=4 /UG=MM.115892 /UG_TITLE=ESTS [+/-]Show full name	295	120	200	17	295	89	248	23	chr11:118921222-118921885	1441518_at
1442190_at	View	View		-	-	275.00	50.20	326.00			,GB:BI736087 /DB_XREF=GI:15713100 /DB_XREF=603359238F1 /CLONE=IMAGE:5366529 /FE =EST /CNT=6 /TID=MM.35149.1 /TIER=CONSEND /STK=3 /UG=MM.35149 /UG_TITLE=ESTS, WEAKLY SIMILAR TO POL2 MOUSE RETROVIRUS-RELATED POL POLYPROTEIN (M.MUSCULUS) [+/-]Show full name	753	493	550	2	753	15	652	2	chr13:24343734-24378868	1442190_at
1442249_at	View	View		367	-	8.91	-	3.37			,GB:BB283887 /DB_XREF=GI:16401406 /DB_XREF=BB283887 /CLONE=A930103L05 /FEA=EST CNT=5 /TID=MM.134465.1 /TIER=CONSEND /STK=3 /UG=MM.134465 /UG_TITLE=ESTS [+/-]Show full name	326	340	205	23	326	248	266	79	chr4:148418770-148419475	1442249_at
1442304_at	View	View		822	-	-	6.55	-			,GB:BB520468 /DB_XREF=GI:16443408 /DB_XREF=BB520468 /CLONE=D830044D09 /FEA=EST CNT=5 /TID=MM.74650.1 /TIER=CONSEND /STK=3 /UG=MM.74650 /UG_TITLE=ESTS [+/-]Show full name	131	49	57	21	131	20	94	36	chr19:27327829-27329420	1442304_at
1443238_at	-	-		-	-	-	0.13	-			,GB:BB370461 /DB_XREF=GI:16406876 /DB_XREF=BB370461 /CLONE=C130053G19 /FEA=EST CNT=3 /TID=MM.209048.1 /TIER=CONSEND /STK=3 /UG=MM.209048 /UG_TITLE=ESTS [+/-]Show full name	21	77	5	8	21	163	13	65	-	1443238_at
1443306_at	View	View		419	-	-	3.07	2.41			,GB:BB380163 /DB_XREF=GI:16407890 /DB_XREF=BB380163 /CLONE=C230004E12 /FEA=EST CNT=3 /TID=MM.80674.1 /TIER=CONSEND /STK=3 /UG=MM.80674 /UG_TITLE=ESTS [+/-]Show full name	1193	1206	712	483	1193	389	953	395	chr12:84124017-84124650	1443306_at
1443552_at	View	View		350	-	15.85	12.52	-			SIMILAR TO HYPOTHETICAL PROTEIN LOC57653	313	98	206	13	313	25	260	32	chr4:45967300-45971875	1443552_at
1444095_a_at	View	View		630	-	19.89	-	-			,GB:BE986579 /DB_XREF=GI:10661053 /DB_XREF=UI-M-CG0P-BEW-B-11-0-UI.S1 /CLONE=UI M-CG0P-BEW-B-11-0-UI /FEA=EST /CNT=6 /TID=MM.40852.1 /TIER=CONSEND /STK=2 /UG=MM.40852 /UG_TITLE=ESTS [+/-]Show full name	2298	2486	2924	147	2298	2260	2611	2728	chr2:128869589-128872073	1444095_a_at
1444552_at	View	View		350	-	-	0.14	-			,GB:BB730792 /DB_XREF=GI:16114067 /DB_XREF=BB730792 /CLONE=E860130C01 /FEA=EST CNT=4 /TID=MM.218148.1 /TIER=CONSEND /STK=2 /UG=MM.218148 /UG_TITLE=ESTS, WEAKLY SIMILAR TO TYROSINE-PROTEIN KINASE JAK3 (M.MUSCULUS) [+/-]Show full name	56	61	254	260	56	390	155	272	chr17:46316950-46317484	1444552_at
1444603_at	View	View		-	-	11.71	2.66	7.12			,GB:AI648973 /DB_XREF=GI:4729807 /DB_XREF=UK33F01.X1 /CLONE=IMAGE:1970809 /FEA= ST /CNT=4 /TID=MM.74819.1 /TIER=CONSEND /STK=2 /UG=MM.74819 /UG_TITLE=ESTS [+/-]Show full name	287	236	410	35	287	108	349	49	chr8:13201411-13201767	1444603_at
Gene Symbol	Large Image Gene +/- 15kb	Closeup Image TSS +/- 15kb	Links	Max Score (threshold of 200)	Nr2e3 -/-	Crx -/-	Nrl -/-	Crx;Nrl -/-	In situ hybridization	Electroporation	Full Name	Averaged Affy Scores								Locus	Affy Mouse 430 2
												B6	Nr2e3 -/-	129	Crx -/-	B6	Nrl -/-	B6;129	Crx;Nrl -/-
1447191_at	View	View		-	-	-	0.09	-			,GB:AI875120 /DB_XREF=GI:5549169 /DB_XREF=UL29G01.X1 /CLONE=IMAGE:2099760 /FEA= ST /CNT=2 /TID=MM.139154.1 /TIER=CONSEND /STK=2 /UG=MM.139154 /UG_TITLE=ESTS [+/-]Show full name	9	10	22	17	9	101	16	20	chr15:99970442-99970934	1447191_at
1449609_at	-	-		-	2.94	0.06	0.65	0.15			HYPOTHETICAL LOC433755	238	81	25	402	238	364	132	875	-	1449609_at
1456101_at	View	View		503	0.01	0.23	0.05	-			SIMILAR TO FERRITIN LIGHT CHAIN (FERRITIN L SUBUNIT)	3	244	19	82	3	57	11	37	chr12:73019876-73027758	1456101_at
1457284_at	View	View		794	-	-	0.15	-			,GB:BB766038 /DB_XREF=GI:16208999 /DB_XREF=BB766038 /CLONE=G370060B20 /FEA=EST CNT=12 /TID=MM.45553.1 /TIER=CONSEND /STK=4 /UG=MM.45553 /UG_TITLE=ESTS [+/-]Show full name	137	204	548	553	137	919	343	670	chr17:56295029-56296073	1457284_at
1459721_at	View	View		1179	-	1.24	0.20	-			,GB:BF662619 /DB_XREF=GI:11927753 /DB_XREF=MAA80H06.X1 /CLONE=IMAGE:3823331 /FE =EST /CNT=2 /TID=MM.32079.1 /TIER=CONSEND /STK=2 /UG=MM.32079 /UG_TITLE=ESTS [+/-]Show full name	82	81	273	221	82	414	178	332	chr19:60230891-60231255	1459721_at