1. # Here is the Map of BaySha Markers... -s -f 1 Map function [1,8]: Haldane is 1 -p 0.0000 Extra parameter for map functions [4-8] -u c The units of measurement is centiMorgans. # # Markermap parameters # -c 5 Number of chromosomes. -i 69 Total number of markers. -m 13 Mean, and... -vm 3.4205 ...standard deviation for Markers/Chromosome. -d 6.2778 Mean, and... -vd 3.1337 ...standard deviation for the intermarker distance. -t 0.0000 Mean length of material outside the flanking markers. # | Chromosome----> ---------------------------------------------------- Marker | 1 2 3 4 5 ---------------------------------------------------- -l 0 | 0.0000 0.0000 0.0000 0.0000 0.0000 -l 1 | 3.5375 8.2046 3.3626 2.0750 9.2062 -l 2 | 5.8538 4.8928 3.6127 8.9050 3.0736 -l 3 | 5.7640 1.6576 1.3022 5.1289 5.4434 -l 4 | 3.7160 13.9474 17.8573 8.9986 9.0548 -l 5 | 2.4663 8.4192 5.5865 9.4745 3.5577 -l 6 | 4.9074 3.0312 11.0412 11.7466 11.7560 -l 7 | 5.8528 4.9749 8.9986 2.0356 3.7275 -l 8 | 6.5514 8.6020 5.4434 8.9943 6.6322 -l 9 | 10.9622 6.5310 5.7249 6.5068 6.5484 -l 10 | 5.7640 7.0888 5.2035 7.7585 4.7233 -l 11 | 6.5719 0.0000 9.0548 0.0000 5.2522 -l 12 | 2.4528 0.0000 4.2361 -l 13 | 2.3071 2.6285 -l 14 | 3.5176 4.8213 -l 15 | 6.7174 5.8714 -l 16 | 6.6343 6.4862 -l 17 | 9.0244 0.0000 -l 18 | 0.0000 ---------------------------------------------------- -Number | 18 11 12 11 17 Names and positions of the markers Chrom Mark Name -b MarkerNames 1 1 MSAT100008 1 2 T1G11 1 3 F21M12 1 4 IND4992 1 5 IND6375 1 6 MSAT1.10 1 7 MSAT108193 1 8 NGA248 1 9 IND1136 1 10 T27K12 1 11 MSAT1.42 1 12 NGA128 1 13 IND2188 1 14 dCAPsAPR2 1 15 F5I14 1 16 MSAT1.13 1 17 MSAT127088 1 18 MSAT1.5 2 1 MSAT2.5 2 2 MSAT200897 2 3 MSAT2.38 2 4 IND628 2 5 MSAT2.36 2 6 MSAT2.41 2 7 CZSOD2 2 8 MSAT2.7 2 9 IND216199 2 10 MSAT2.10 2 11 MSAT2.22 3 1 NGA172 3 2 MSAT3.99 3 3 ATHCHIB2 3 4 MSAT305754 3 5 MSAT3.19 3 6 MSAT3.117 3 7 MSAT3.32 3 8 MSAT3.21 3 9 MSAT318406 3 10 MSAT3.65 3 11 MSAT3.18 3 12 MSAT3.70 4 1 MSAT4.39 4 2 MSAT4.8 4 3 MSAT4.43 4 4 NGA8 4 5 MSAT4.35 4 6 MSAT4.15 4 7 CIW7 4 8 MSAT4.18 4 9 MSAT4.9 4 10 MSAT4.68 4 11 MSAT4.37 5 1 MSAT500027 5 2 NGA225 5 3 NGA249 5 4 NGA151 5 5 MSAT5.14 5 6 NGA139 5 7 MSAT512110 5 8 MSAT5.22 5 9 MSAT5.59 5 10 MSAT5.9 5 11 MSAT518662 5 12 MSAT520037 5 13 MSAT5.12 5 14 JV6162 5 15 JV7576 5 16 MSAT5.19 5 17 K9I9 -e MarkerNames ---------------------------------------------------------------------- 2. # Here is the Map of ColLer Markers... -s -f 1 Map function [1,8]: Haldane is 1 -p 0.0000 Extra parameter for map functions [4-8] -u c The units of measurement is centiMorgans. # # Markermap parameters # -c 5 Number of chromosomes. -i 77 Total number of markers. -m 15 Mean, and... -vm 5.5946 ...standard deviation for Markers/Chromosome. -d 6.6842 Mean, and... -vd 5.7972 ...standard deviation for the intermarker distance. -t 0.0000 Mean length of material outside the flanking markers. # | Chromosome----> ---------------------------------------------------- Marker | 1 2 3 4 5 ---------------------------------------------------- -l 0 | 0.0000 0.0000 0.0000 0.0000 0.0000 -l 1 | 3.5309 2.2731 7.9112 7.1087 4.1941 -l 2 | 5.5959 7.1087 3.5309 18.2322 4.1941 -l 3 | 2.8910 4.8819 2.2731 3.5309 8.7471 -l 4 | 7.1087 6.3376 4.8819 15.7541 2.2731 -l 5 | 7.1087 25.7907 4.1941 11.4787 3.5309 -l 6 | 7.9112 2.2731 12.4730 2.2731 3.5309 -l 7 | 5.5959 12.4730 10.5282 2.8910 3.5309 -l 8 | 6.3376 2.2731 4.8819 16.9608 2.2731 -l 9 | 9.6186 33.8699 2.8910 13.5145 15.7541 -l 10 | 2.2731 3.5309 11.4787 2.2731 14.6068 -l 11 | 2.2731 2.2731 7.1087 0.0000 9.6186 -l 12 | 7.9112 8.7471 0.0000 4.8819 -l 13 | 2.2731 2.2731 4.8819 -l 14 | 4.8819 1.6761 0.0000 -l 15 | 2.8910 0.0000 -l 16 | 13.5145 -l 17 | 4.1941 -l 18 | 1.6761 -l 19 | 2.2731 -l 20 | 1.6761 -l 21 | 5.5959 -l 22 | 2.8910 -l 23 | 1.6761 -l 24 | 5.5959 -l 25 | 0.0000 ---------------------------------------------------- -Number | 25 15 12 11 14 Names and positions of the markers Chrom Mark Name -b MarkerNames 1 1 C1_1 1 2 C1_6 1 3 C1_14 1 4 C1_21 1 5 C1_29 1 6 C1_40 1 7 C1_53 1 8 C1_63 1 9 C1_74 1 10 C1_86 1 11 C1_90 1 12 C1_92 1 13 C1_101 1 14 C1_97 1 15 C1_110 1 16 C1_115 1 17 C1_137 1 18 C1_143 1 19 C1_145 1 20 C1_148 1 21 C1_151 1 22 C1_155 1 23 C1_160 1 24 C1_163 1 25 C1_172 2 1 C5_1 2 2 C5_4 2 3 C5_17 2 4 C5_22 2 5 C5_33 2 6 C5_65 2 7 C5_69 2 8 C5_92 2 9 C5_96 2 10 C5_132 2 11 C5_137 2 12 C5_140 2 13 C5_161 2 14 C5_164 2 15 C5_167 3 1 C2_1 3 2 C2_8 3 3 C2_14 3 4 C2_17 3 5 C2_28 3 6 C2_33 3 7 C2_53 3 8 C2_67 3 9 C2_74 3 10 C2_76 3 11 C2_89 3 12 C2_106 4 1 C3_1 4 2 C3_16 4 3 C3_39 4 4 C3_33 4 5 C3_57 4 6 C3_76 4 7 C3_78 4 8 C3_81 4 9 C3_103 4 10 C3_117 4 11 C3_120 5 1 C4_1 5 2 C4_4 5 3 C4_8 5 4 C4_19 5 5 C4_22 5 6 C4_30 5 7 C4_36 5 8 C4_40 5 9 C4_43 5 10 C4_68 5 11 C4_88 5 12 C4_101 5 13 C4_107 5 14 C4_111 -e MarkerNames -------------------------------------------------------------------- 3. # Here is the Map of CviLer Low Fe Markers... -s -f 1 Map function [1,8]: Haldane is 1 -p 0.0000 Extra parameter for map functions [4-8] -u c The units of measurement is centiMorgans. # # Markermap parameters # -c 5 Number of chromosomes. -i 93 Total number of markers. -m 18 Mean, and... -vm 4.8270 ...standard deviation for Markers/Chromosome. -d 5.5847 Mean, and... -vd 2.6668 ...standard deviation for the intermarker distance. -t 0.0000 Mean length of material outside the flanking markers. # | Chromosome----> ---------------------------------------------------- Marker | 1 2 3 4 5 ---------------------------------------------------- -l 0 | 0.0000 0.0000 0.0000 0.0000 0.0000 -l 1 | 5.9358 2.9205 7.3302 7.0657 8.4950 -l 2 | 6.8935 9.6792 5.0235 13.1596 4.1533 -l 3 | 3.7331 5.1025 2.1280 5.8892 4.5486 -l 4 | 7.3905 10.3507 8.3527 5.4742 5.8892 -l 5 | 2.9205 5.5613 2.5276 2.5095 4.0915 -l 6 | 7.8349 5.6972 3.2979 5.8432 4.9470 -l 7 | 0.6849 5.6059 5.9358 4.1850 4.5143 -l 8 | 6.0314 5.0627 13.4132 5.0627 3.6781 -l 9 | 4.2171 5.0627 3.7331 2.9205 4.5143 -l 10 | 6.0314 3.7054 4.1850 5.3898 4.9470 -l 11 | 5.9832 5.8432 5.5613 4.0915 3.6781 -l 12 | 6.5133 8.8841 5.9832 4.0915 5.4317 -l 13 | 5.5613 5.4742 3.7331 7.7707 7.3302 -l 14 | 4.1850 5.0627 3.7612 7.9002 6.8379 -l 15 | 7.3905 1.4085 4.5834 0.0000 0.0000 -l 16 | 10.1670 0.0000 6.8935 -l 17 | 1.0453 7.5775 -l 18 | 10.3507 16.8236 -l 19 | 0.6945 3.7612 -l 20 | 6.4606 3.3223 -l 21 | 1.7670 0.0000 -l 22 | 6.3578 -l 23 | 3.7054 -l 24 | 4.6545 -l 25 | 7.1853 -l 26 | 0.0000 ---------------------------------------------------- -Number | 26 16 21 15 15 Names and positions of the markers Chrom Mark Name -b MarkerNames 1 1 HH.360L_Col 1 2 GH.127L_Col_ADH 1 3 CD.173L_175C_Col 1 4 CC.318C 1 5 GH.157L_Col 1 6 BF.116C 1 7 CH.215L 1 8 HH.375L 1 9 GD.160C 1 10 EC.88C 1 11 CH.200C 1 12 BF.206L_Col 1 13 CD.89C 1 14 EG.113L_115C 1 15 GD.97L 1 16 GB.112L 1 17 AD.106L_Col 1 18 AD.121C 1 19 CC.98L_Col_101C 1 20 CH.160L_Col 1 21 GD.86L 1 22 EC.66C 1 23 EC.480C 1 24 HH.335C_Col_PhyA 1 25 AXR_1 1 26 PVV4 2 1 DF.77C 2 2 GB.120C_Col_GAPC 2 3 FD.111L_Col_136C 2 4 BF.270L_Col_271C 2 5 EC.83C_84L 2 6 AD.92L 2 7 GB.210L 2 8 BH.225C_Col 2 9 HH.440L 2 10 HH.117C 2 11 GD.296C_Col 2 12 FD.98C 2 13 AD.182C 2 14 HH.171C_Col_173L 2 15 BH.109L_Col 2 16 HH.90L_Col 3 1 HH.122C_120L 3 2 DF.119L 3 3 BF.168L_Col 3 4 HH.143C 3 5 GB.102L_Col_105C 3 6 CC.262C 3 7 HH.445L_Col 3 8 AD.75C_Col 3 9 CD.116L 3 10 CD.179L 3 11 CH.60C 3 12 BH.96L_Col 3 13 HH.480C 3 14 AD.129L_Col 3 15 GH.121L_Col 3 16 GH.117C 3 17 DF.184L_Col 3 18 AD.114C_Col 3 19 BH.144L 3 20 CH.690C 3 21 FD.207L 4 1 ANL2 4 2 GH.250C_GA1 4 3 CH.169C 4 4 EC.306L 4 5 BH.92L_Col 4 6 FD.154L 4 7 CD.84C_Col_85L 4 8 g4539 4 9 CD.329C_Col_CH42 4 10 FD.167L_Col 4 11 CH.70L_71C_Col 4 12 HH.159C_Col 4 13 GB.490C 4 14 GB.750C 4 15 BH.342C_347L_Col 5 1 EC.235L_Col_247C 5 2 DF.140C 5 3 BH.120L_Col 5 4 GD.298C 5 5 Erecta_GPA1 5 6 FD.150C 5 7 FD.85C 5 8 BF.221L 5 9 CH.65C 5 10 FD.222L_Col 5 11 CH.284C 5 12 FD.81L 5 13 GH.580L 5 14 BF.325L 5 15 AD.156C -e MarkerNames --------------------------------------------------------------------- 4. # Here is the Map of CviLer High Fe Markers... -s -f 1 Map function [1,8]: Haldane is 1 -p 0.0000 Extra parameter for map functions [4-8] -u c The units of measurement is centiMorgans. # # Markermap parameters # -c 5 Number of chromosomes. -i 93 Total number of markers. -m 18 Mean, and... -vm 4.8270 ...standard deviation for Markers/Chromosome. -d 5.5377 Mean, and... -vd 2.5894 ...standard deviation for the intermarker distance. -t 0.0000 Mean length of material outside the flanking markers. # | Chromosome----> ---------------------------------------------------- Marker | 1 2 3 4 5 ---------------------------------------------------- -l 0 | 0.0000 0.0000 0.0000 0.0000 0.0000 -l 1 | 5.9329 2.7218 7.2369 7.4648 9.3388 -l 2 | 6.8288 8.8943 5.9329 13.2346 4.2579 -l 3 | 3.8616 5.1516 1.9870 5.5000 4.6296 -l 4 | 7.2926 10.6787 7.7075 5.1139 5.4600 -l 5 | 2.7218 5.6239 2.3573 2.7218 3.8081 -l 6 | 7.7075 5.7535 3.4496 5.4205 5.4205 -l 7 | 0.6410 5.6664 6.3757 4.6966 4.1983 -l 8 | 5.5820 4.6966 12.2346 5.1139 4.1983 -l 9 | 4.3192 5.1139 3.8616 3.0938 4.5969 -l 10 | 5.5820 3.8346 4.2883 5.4600 4.5969 -l 11 | 5.9773 5.4205 5.5820 3.8346 4.1983 -l 12 | 6.0223 8.1895 6.8811 4.1983 5.0402 -l 13 | 5.1516 5.0768 3.8616 8.6150 7.2369 -l 14 | 3.8889 5.1139 3.4979 7.2926 7.2369 -l 15 | 7.2926 1.3159 4.6629 0.0000 0.0000 -l 16 | 9.8680 0.0000 6.3757 -l 17 | 0.9772 7.4648 -l 18 | 10.5879 15.9227 -l 19 | 0.6494 3.8889 -l 20 | 5.9773 3.4736 -l 21 | 1.6503 0.0000 -l 22 | 5.8892 -l 23 | 3.8346 -l 24 | 4.7308 -l 25 | 8.0821 -l 26 | 0.0000 ---------------------------------------------------- -Number | 26 16 21 15 15 Names and positions of the markers Chrom Mark Name -b MarkerNames 1 1 HH.360LCol 1 2 GH.127LColADH 1 3 CD.173L175CCol 1 4 CC.318C 1 5 GH.157LCol 1 6 BF.116C 1 7 CH.215L 1 8 HH.375L 1 9 GD.160C 1 10 EC.88C 1 11 CH.200C 1 12 BF.206LCol 1 13 CD.89C 1 14 EG.113L115C 1 15 GD.97L 1 16 GB.112L 1 17 AD.106LCol 1 18 AD.121C 1 19 CC.98LCol101C 1 20 CH.160LCol 1 21 GD.86L 1 22 EC.66C 1 23 EC.480C 1 24 HH.335CColPhyA 1 25 AXR1 1 26 PVV4 2 1 DF.77C 2 2 GB.120CColGAPC 2 3 FD.111LCol136C 2 4 BF.270LCol271C 2 5 EC.83C84L 2 6 AD.92L 2 7 GB.210L 2 8 BH.225CCol 2 9 HH.440L 2 10 HH.117C 2 11 GD.296CCol 2 12 FD.98C 2 13 AD.182C 2 14 HH.171CCol173L 2 15 BH.109LCol 2 16 HH.90LCol 3 1 HH.122C120L 3 2 DF.119L 3 3 BF.168LCol 3 4 HH.143C 3 5 GB.102LCol105C 3 6 CC.262C 3 7 HH.445LCol 3 8 AD.75CCol 3 9 CD.116L 3 10 CD.179L 3 11 CH.60C 3 12 BH.96LCol 3 13 HH.480C 3 14 AD.129LCol 3 15 GH.121LCol 3 16 GH.117C 3 17 DF.184LCol 3 18 AD.114CCol 3 19 BH.144L 3 20 CH.690C 3 21 FD.207L 4 1 ANL2 4 2 GH.250CGA1 4 3 CH.169C 4 4 EC.306L 4 5 BH.92LCol 4 6 FD.154L 4 7 CD.84CCol85L 4 8 g4539 4 9 CD.329CColCH42 4 10 FD.167LCol 4 11 CH.70L71CCol 4 12 HH.159CCol 4 13 GB.490C 4 14 GB.750C 4 15 BH.342C347LCol 5 1 EC.235LCol247C 5 2 DF.140C 5 3 BH.120LCol 5 4 GD.298C 5 5 ErectaGPA1 5 6 FD.150C 5 7 FD.85C 5 8 BF.221L 5 9 CH.65C 5 10 FD.222LCol 5 11 CH.284C 5 12 FD.81L 5 13 GH.580L 5 14 BF.325L 5 15 AD.156C -e MarkerNames