IRAK-M Expression Limits Dendritic Cell Activation and Proinflammatory Cytokine Production in Response to Helicobacter pylori

Helicobacter pylori (H. pylori) infects the gastric mucosa and persists for the life of the host. Bacterial persistence may be due to the induction of regulatory T cells (Tregs) whichmay have protective effects against other diseases such as asthma. It has been shown that H. pylori modulates the T cell response through dendritic cell reprogramming but the molecular pathways involved are relatively unknown. The goal of this study was to identify critical elements of dendritic cell (DC) activation and evaluate potential influence on immune activation. Microarray analysis was used to demonstrate limited gene expression changes in H. pylori stimulated bone marrow derived DCs (BMDCs) compared to the BMDCs stimulated with E. coli. IRAK-M, a negative regulator of TLR signaling, was upregulated and we selectedit for investigation of its role in modulating the DC and T cell responses. IRAK-M−/− and wild type BMDC were compared for their response to H. pylori. Cells lacking IRAK-M produced significantly greater amounts of proinflammatory MIP-2 and reduced amounts of immunomodulatory IL-10 than wild type BMDC. IRAK-M−/− cells also demonstrated increased MHC II expression upon activation. However, IRAK-M−/− BMDCs were comparable to wild type BMDCs in inducing T-helper 17 (TH17) and Treg responses as demonstrated in vitro using BMDC CD4+ T cells co-culture assays,and in vivo though the adoptive transfer of CD4+ FoxP3-GFP T cells into H. pylori infected IRAK-M−/− mice. These results suggest that H. pylori infection leads to the upregulation of anti-inflammatory molecules like IRAK-M and that IRAK-M has a direct impact on innate functions in DCs such as cytokine and costimulation molecule upregulation but may not affect T cell skewing.


Introduction
Helicobacter pylori (H. pylori) colonizes the gastric mucosa of over half of the world's population [1]. Infection lasts for life and is associated with a variety of gastric diseases including peptic ulcer disease, gastric adenocarcinoma, and MALT lymphoma [1][2][3][4][5][6][7]. Greater than 80% of infected people do not develop disease but even asymptomatic individuals develop histologic gastritis [8,9]. The lack of disease in most individuals was originally believed to be due in part to variations in bacterial virulence mechanisms between H. pylori strains. It is becoming increasingly evident however that limited disease is due in large part to host immunoregulatory mechanisms, a response that also favors bacterial persistence [10][11][12][13][14][15][16][17].
The development of histologic gastritis is T cell-dependent and is predominantly driven by a mix of T H 1 and T H 17 responses [18][19][20][21][22][23]. Despite the role of these T helper subsets in promoting inflammation, it has been shown that regulatory T cells (T regs ) accumulate in the gastric mucosa during chronic H. pylori infection and contribute to persistent H. pylori colonization [10,[13][14][15]17]. The loss of regulatory T cell function in murine models of Helicobacter infection results in significantly increased inflammation and reduced bacterial loads, demonstrating that these H. pylori-mediated immunomodulatory effects may be beneficial to the host and the bacteria [10,15,16]. The benefits to the host extend beyond the stomach as H. pylori infection has been inversely correlated with esophageal cancer in adults and wheezing in children. The protective effects of H.pylori infection maybe dependent on T regs [24][25][26][27].
Down regulation of the host immune response is mediated by regulatory T cells but the bacterial, environmental, and cellular factors that promote the activation of regulatory T cells remain illdefined for H. pylori infection. Dendritic cells (DCs) are potent antigen-presenting cells that are critical for the induction of downstream adaptive immune responses [28,29] and they have been demonstrated to play an important role in H. pylori infection. DCs sense H. pylori primarily through Toll-like receptors (TLR) 2 and 4 in a MyD88 dependent manner [30,31]. H. pylori infection however may skew the DC response to favor the generation of T regs cells via IL-18 dependent mechanisms [12,27]. This Treg response, influenced by DCs, also protects against asthma in mice [32].
A better understanding of how H. pylori affects DC function and how DCs regulate downstream immune events may provide additional insight into H. pylori pathogenesis and persistence but may also enhance our understanding of the host response to mucosal bacteria in general. One of the mechanisms employed by the host to limit microbial induced activation of APCs is the expression of interleukin-1 receptor-associated kinase M (IRAK-M), a negative regulator or TLR [33]. IRAK-M expression has been demonstrated to limit immune activation to specific pathogens, and to play a role in maintaining immune homeostasis in the gut through its inducement by commensal bacteria [33][34][35][36].
We observed upregulation of IRAK-M in a transcriptome analysis of H. pylori stimulated DCs, one of only ten genes to be induced. The purpose of the present study therefore was to characterize the role of IRAK-M in H. pylori-activated DCs and to determine whether IRAK-M influences activation of the T cell response.We now report that IRAK-M expression in DCs is dependent upon TLR activation, and its expression is associated with limiting the innate proinflammatory activity of the DC, as well as maturation as measured by MHC II expression.

Ethics Statement
This study was carried out in strict accordance with the recommendations in the Guide for the Care and Use of Laboratory Animals of the National Institutes of Health. The protocols were approved by the Institutional Animal Care and Use Committee of the University of Maryland in Baltimore (#0809004). All efforts were made to minimize pain and suffering.

Mice
Six-to thirteen-week-old C57BL/6, TLR2 2/2 , and TLR4 2/2 mice were obtained fromJackson Laboratory (Bar Harbor, ME). IRAK-M deficient mice were derived on a C57BL/6 background as described previously [33] and were bred homozygously at the University of Maryland School of Medicine (Baltimore, MD, USA). C57BL/6 FoxP3-GFP mice and C57BL/6 OT-II Foxp3-GFP mice were a generous gift from David Scott (Bethesda, MD, USA) [37]. All animals were housed under pathogen-free conditions in microisolater cages at the University of Maryland Baltimore animal facilities. Mice were euthanized for tissue collection by CO 2 asphyxiation followed by thoracotomy.

Bacterial Strains and Infection
E. coli K12 was purchased from ATCC (#29425) (Manassas, VA) and grown on LB plates supplemented with amphotericin B (2.5 mg/ml). The mouse-adapted H. pylori Sydney Strain 1 (SS1) [38]and strain 26695 (ATCC #700392) were grown on Columbia agar (Difco, Detroit, MI) supplemented with7% horse blood and antibiotics at 37uC. For inoculation of mice, bacteria were transferred to 10 ml Brucella broth (Difco) supplemented with 10% fetal bovine serum (Invitrogen, Carlsbad, CA) and amphotericin B (2.5 mg/ml). Liquid cultures were established in T25 flasks and maintained at 37uC with 10% CO 2 . Infections with H. pylori SS1 were performed by delivering 1610 7 CFU in 0.5 ml Brucella broth by oral gavage using a 20 G feeding needle attached to a 1cc syringe. Antigen lysates were prepared as previously described [39].

Generation of BMDCs and in Vitrostimulation Assays
Femurs and tibias were removed from 6-14 week old C57BL/6 WT, TLR2 2/2 , TLR4 2/2 , and IRAK-M 2/2 mice at necropsy. Bone marrow was flushed out with a syringe filled with RPMI 1640 and cells were cultured in RPMI medium supplemented with either 100 gg/mL Flt3L (R&D Systems, Minneapolis, MN) or 7 gg/ml GM-CSF, and 10% heat inactivated FBS. Bone marrow derived DC (BMDC) were recovered after 8-9 days and plated in 48 well plates at 1610 6 cells/well. Stimulation of BMDCs was performed with 10 mg/mL of either H. pylori SS1 lysate, H. pylori 26695lysate or E. coli K12 lysate. For stimulation with live bacteria, bacterial density was determined by optical density at 450 gm and used at a multiplicity of infection (MOI) of 10. Supernatants were collected at 4, 8, and 24 hours after addition of lysate for determination of TNFa, IL-10 and MIP-2 levels by quantitative enzyme linked immunosorbent assay (ELISA) using the relevant Duoset kits according to the manufacturer's instructions (R&D Systems).

T Cell Co-culture Experiments
Coculture experiments were performed by plating 1610 5 BMDCs per well in 90 well U-bottom plates and stimulating with 10 mg/mL OVA peptide. CD4 + T cells were isolated from spleens from 6-14 week old C57BL/6 OT-II Foxp3-GFP mice using the CD4 + MagCellect Isolation Kit (R&D Systems) according to the manufacturer's instructions. T cells were added 5610 5 cells per well to the BMDC in 96 well plates in the presence of either T reg promoting conditions (20 ng/mL TGF-b (R&D Systems) & 25 U of mIL-2 (E-bioscience, San Diego, CA), or T H 17 promoting conditions (2 ng/mL TGF-b (R&D Systems) & 20 ng/mL mIL-6 (Gemini Bio-products, Sacramento, CA). Alternatively, 1610 5 BMDCs were plated in 90 well U-bottom plates and stimulated with media alone or 10 mg/mL H. pylori SS1 antigen lysate. CD4 + T cells were isolated from spleens from 6-14 week old C57BL/6 mice infected with H. pylori SS1 and 5610 5 T cells were added to the wells in the absence of any additional stimulation. Flow Cytometry Analysis T-cells were stained with anti-CD4-APC and anti-IL17A-PE (eBioscience). BMDCs were stained with anti-MHCII-Pacific Blue, anti-PD-L1 PE, anti-CD40 PE-Cy5, anti-CD86 PE-Cy5 (eBioscience). All cells were analysed using a LSRII flow cytometer (BD Biosciences, San Hose, CA). Data were analyzed by FlowJo7 software (Tree Star, Ashland, OR).

Adoptive Transfer Experiments
CD4+ T cells were isolated from the spleens of FoxP3-GFP mice using the MagCellect Mouse CD4+ T cell isolation kit (R&D Systems) and sorted for GFP negative cells using a BD FACSAria flow cytometer. A total of 2610 6 CD4 + , GFP 2 cells were transferred into WT and IRAK-M 2/2 recipients by tail vein injection. Animals were infected with SS1 on day 3 and animals were harvested at 8 weeks for analysis. RNA was isolated from gastric tissue using the RNeasy kit (Qiagen, Germantown, MD) and converted to cDNA for qPCR analysis of GFP expression.

RNA Isolation, Microarray Processing and Microarray Statistical Analysis
BMDCs were recovered following stimulation at the indicated timepoints and RNA was isolated using the RNeasy kit (Qiagen). cRNA was prepared from RNA using the Illumina TotalPrep RNA amplification kit. cRNA samples were hybridized onto Illumina MouseRef8_v2.0 bead array chips (San Diego, CA) containing 25,967 probes (n = 3 for antigen lysate treated BMDCs, n = 2 for media treated BMDCs). Analysis was performed using the limma R package to compare gene expression profiles among different stimulated groups compared to media-treated BMDCs. Only probes with a false discovery rate (FDR) of ,0.1 were included. Raw and normalized data sets were deposited into the NCBI Gene Expression Omnibus database under accession number GSE 44954.

Statistical Analysis
Statistical analysis was performed using GraphPad Prism for Macintosh 5.0 c (GraphPad Software, San Diego, CA). The Mann-Whitney test was used for analysis of statistical significance and a P value ,0.05 was considered significant.

H. pylori Stimulation of BMDCs Results in Gene Expression Changes in a Limited Set of Genes after 24 hours
To identify the molecular pathways activated by H. pylori stimulation in DCs, we performed microarray analysis on BMDCs stimulated for 24 hours with either E. coli or H. pylori bacterial lysate. As expected, E. coli-stimulated BMDCs (EC-BMDCs) exhibited gene expression changes in many genes ( Figure 1A). More than half of 2162 impacted genes were downregulated. Surprisingly, H. pylori-stimulated BMDCs (HP-BMDCs) showed limited gene expression changes with only 10 genes significantly affected in their expression ( Table 1). Six of the 10 genes are implicated in anti-inflammatory pathways. Since H. pylori has been demonstrated to activate DCs primarily through TLR2 and TLR4 [30,31], we were particularly interested in the increased expression of IRAK-M, a negative regulator of TLR signaling [33]. Using a qPCR approach, we confirmed that IRAK-M was indeed upregulated in BMDCs following activation with H. pylori lysate, and that in contrast to EC-BMDCs, IRAK-M expression in HP-BMDCs remained significantly high at 24 hour (P,0.01; Figure 1B). IRAK-M was demonstrated to be significantly upregulated in H. pylori-stimulated BMDC generated with either Flt3L or GM-CSF (P,0.01; Figure 1C) and this response was consistent with using lysates from either the Hp SS1 or the common laboratory strain 26695. Live Hp SS1 was also demonstrated to induce significant levels of IRAK-M expression although less effective than lysate antigen (P,0.01).

Lack of IRAK-M in BMDCs Results in a More Proinflammatory Phenotype in HP-BMDCs
IRAK-M has been shown to play a role in DC activation in a tumor vaccine and in a LPS endotoxin tolerance model of H. pylori activation. [41,42] Therefore, we wanted to determine if IRAK-M expression affects cytokine production in HP-BMDCs by comparing WT and IRAK-M 2/2 BMDCs. IRAK-M 2/2 cells have previously been shown to have a more proinflammatory phenotype [33,41]. BMDCs deficient in IRAK-M responded to H. pylori antigens by producing TNFa and MIP-2 as early as four hours post activation and peaking at eight hours when levels of both cytokines were significantly higher than for WT BMDCs (P,0.05; Figure 2A and 2B; Supplemental Figure 1).TNFa levels remained higher in IRAK-M 2/2 cells at 24 hours post stimulation (P,0.01). IL-12p70 was also measured but were undetectable (data not shown).This is consistent with our previous observations using H. felis activation of BMDC [43].Conversely, HP-BMDCs secreted significantly less IL-10 compared to WT HP-BMDCs at all time points although levels increased steadily over the 24-hour period ( Figure 2C).
Cell surface analysis of activated cells showed that IRAK-M 2/2 HP-BMDCs expressed higher levels of MHC II (P,0.01; Figure 3A), suggesting that IRAK-M normally limits DC activation as measured by MHC II expression in response to H. pylori stimulation. Conversely, expression of the down regulatory co-receptor PD-L1 was significantly reduced in activated IRAK-M2/2 BMDC compared to WT cells (P,0.05; Figure 3B), indicating that IRAK-M normally limits the potential of DC to activate Th cells upon activation with H. pylori. Co-receptors CD86 and CD40 however remained comparable between activated IRAK-M2/2 and WT BMDC ( Figures 3C and 3D). Together, these data suggest that in response to H. pylori stimulation, IRAK-M expression contributes to a lack of DC maturation and promotes a regulatory phenotype exemplified by IL-10 production.

IRAK-M upregulation in HP-BMDCs is dependent on both TLR2 and TLR4
TLR2 and TLR4 have been shown to play an important role in H. pylori sensing by DCs [31]. We therefore sought to determine if either TLR2 or TLR4 might be important in IRAK-M upregulation by comparing HP-BMDCs from WT, TLR2 2/2 and TLR4 2/2 mice. Whereas WT HP-BMDC displayed a 15-fold increase in IRAK-M expression by eight hours that remained high at 24 hours, Figure 4A illustrates that IRAK-M upregulation in HP-BMDCs is dependent on both TLR2 and TLR4 expression, and that abrogation of either TLR results in a reduction in IRAK-M expression(P,0.05).Additional evidence for the importance of both TLR2 and TLR4 in H. pylori lysate induced activation of DC is demonstrated in Figure 4B and 4C where expression of IL-10 and MIP-2 respectively are shown to be significantly reduced compared to BMDC from WT mice (P,0.01). Although expression of both cytokines increased by 24 hours for TLR4 KO cells, these cytokines were largely absent in the cells from TLR2 deficient mice.

IRAK-M expression in DCs does not affect T H 17 differentiation in T cells
Since T H 17 cells have been shown to contribute to the gastritis seen in H. pylori infection as well as to protection against H. pylori in experimental murine vaccine models [21,[44][45][46], we sought to determine whether the proinflammatory phenotype of IRAK-M 2/ 2 BMDCs might increase T H 17 activation using a DC-T cell coculture system. Studies using H. pylori stimulated BMDC cells to stimulate splenic CD4 + cells from mice infected with H. pylori showed no increase in either IFNc or IL-17 producing cells from either WT or IRAK-M2/2 mice (Supplemental Figure 2). This is consistent with the suppression that occurs in the H. pylori-specific T cell response in infected hosts. T cells from transgenic mice with a TCR specific for the OVA antigen were used to increase the frequency of responsive cells. IRAK-M 2/2 BMDCs were similar to WT BMDCs in their ability to generate IL-17A + CD4 + T cells ( Figure 5A and 5B). There was no difference in the number of IL-17A + T cells following OVA exposure when H. pylori activated DC from WT and IRAK-M 2/2 were used as APC cells.

IRAK-M 2/2 BMDCs are Comparable to WT BMDCs in Generating T regs
Since the balance of T H 17/T regs cells contributes to the extent of the inflammatory response in H. pylori infection [12], we also sought to determine if T reg generation is affected by the lack of IRAK-M in BMDCs using the DC-T cell co-culture system described above. The OVA TCR transgenic mice are also transgenic of FoxP3-GFP expression, providing a convenient marker for FoxP3. HP-BMDC were co-cultured with these T cells and stimulated with OVA and the activated T cells were assessed by flow cytometery for GFP ( Figure 6A and6B). WT and IRAK-M 2/2 BMDCs did not differ in their ability to generate T regs . To determine whether IRAK-M expression influences T reg induction in response to H. pylori in vivo, we sorted CD4+ GFP 2 T cells from Foxp3-GFP C57BL/6 animals to eliminate natural Treg cells and any preexisting iTreg cells. These GFP negative cells were used for adoptive transfer into WT and IRAK-M 2/2 recipients. Recipient mice were subsequently infected with H. pylori and the amount of new FoxP3-GFP expression was determined four weeks later by isolating gastric tissue and using qPCR analysis. H. pylori infection in WT animals resulted in the induction of Foxp3 expression in the gastric mucosa (Figure 7, P,0.05). Gastric tissue from IRAK-M 2/ 2 animals also had increased Foxp3 expression after H. pylori infection but levels were comparable to those observed in the gastric tissue of WT animals. Together, this data suggests that the proinflammatory phenotype of IRAK-M 2/2 BMDCs does not affect T reg generation.

Discussion
Recent studies have demonstrated that DCs play an important immunoregulatory role in H. pylori infection and may even impact susceptibility or severity of other diseases such as asthma development [11,12,27,32,47]. An understanding of the molecular pathways that are activated in DCs by H. pylori, therefore, could provide significant insight into how immunoregulatory and inflammatory pathways are controlled during the course of infection and how these mechanisms may act more broadly. In the present study, we used a microarray approach to identify molecules in DCs whose expression is changed most significantly by H. pylori. We identified IRAK-M as a potential important regulatory protein for further characterization.
By comparing HP-BMDCs to EC-BMDCs in our microarray study, H. pylori appeared to be weakly immunogenic as only 10 gene expression changes were apparent after 24 hours. Although this contrasted significantly with the 2162 gene expression changes seen in the EC-BMDCs, our data are consistent with previous microarray analyses on H. pylori-activated cells. One study conducted a BMDC microarray following H. pylori exposure observed 126 gene expression changes after six hours [30]. A more recent study using H. pylori LPS stimulation of HEK293 cells reported only three significant gene expression changes after 24 hours [48]. The low number of gene expression changes may be a reflection of H. pylori pathogen associated molecular patterns (PAMPs)having reduced TLR stimulating activity and that after 24 hours, the induced expression of early genes may no longer be evident. The LPS is well documented to lack endotoxin activity, and structural studies confirm that the length and number of its lipid chains do not favor binding to TLR4 [49][50][51]. The flagellin protein has also been shown to lack the consensus sequence typically associated with binding to TLR5 [52].
Among the TLRs, TLR2 has been demonstrated to play a dominant role on the activation of APC by H. pylori [31]. We therefore investigated IRAK-M, a negative regulator of TLR signaling, in greater detail [33]. IRAK-M lacks kinase activity and its expression pattern was initially thought to be restricted to the monocyte/macrophage lineage [53]. It is now known that IRAK-M may also be expressed in dendritic cells and epithelial cells and is a key factor in endotoxin tolerance [33,41,54,55]. IRAK-M 2/2 BMDCs secrete increased levels of T H 1 cytokines such as IFNc, and skew the T cell response in vivotowards a more proinflammatory phenotype to prolong survival in a tumor vaccine model [41]. In a separate study, IRAK-M 2/2 BMDCs that were tolerized to LPS exhibited higher levels of MHCII and lower levels of IL-10 [42].
In our study, IRAK-M 2/2 BMDCs stimulated with H. pylori also displayed a more pro-inflammatory phenotype compared to WT BMDCs. IRAK-M 2/2 BMDCs displayed increased MHC II expression and higher MIP-2, TNFa production, and also produced less immunoregulatory IL-10 and PD-L1. IRAK-M expression was shown to be dependent on TLR2 and TLR4 activation. Both TLR2 and TLR4 have been shown to be important in H. pylori infection [31]. Despite the impact of the IRAK-M deficiency on MHC II and cytokine balance in HP-BMDCs, IRAK-M 2/2 DCs failed to change the balance of T cell subsets induced in vitro. DCs have been shown to affect the balance of T H 17 and T reg cells and to influence the outcome of H. pylori infection [12]. IRAK-M 2/2 DCs however were comparable to WT DCs in generating T H 17 and T reg in vitro. Additionally, the IRAK-M deficiency in mice did not affect iT reg generation in vivo.
IRAK-M appears to play different roles in other infections and can be either beneficial or deleterious to the host [35,36,40,54,56]. For example, IRAK-M deficiency led to improved bacterial clearance and host survival in response to both Streptococcus pneumoniae and Klebsiella pneumoniae infections [35,36]. In contrast, IRAK-M deficiency is deleterious to the host after influenza infection because the pro-inflammatory phenotype leads to more extensive lung injury in the host [40]. These studies all indicate that IRAK-M helps limit inflammation against pathogenic microbes, an event that can be beneficial to the host, as in the case of influenza infection. Interestingly, gut commensals have also been shown to activate IRAK-M expression and in the absence of both IRAK-M and IL-10, mice were more prone to developing colitis [34].
Of possible relation to H. pylori infection, in human genetic studies, IRAK-M has also been associated with asthma in an Italian cohort [57]. The association was not observed in either Japanese or German groups [58,59]. Given the link between H. Figure 6. IRAK-M 2/2 BMDCs do not affect T reg induction in vitro. (A) BMDCs isolated from WT and IRAK-M 2/2 mice were plated and pulsed with OVA for 2 hours before CD4+ T cells isolated from OT-II Foxp3-GFP animals were added to the wells in the presence of IL-2 and TGFb for 72 hours. Cells were restimulated with PMA and ionomycin in the presence of monesin, and Foxp3-GFP expression in CD4 + T cells was measured by flow cytometry.Data are representative of three independent experiments. (B) Bar graph represents mean 6 SD from data collected from three individual experiments performed in duplicate. doi:10.1371/journal.pone.0066914.g006 Figure 7. IRAK-M deficiency does not affect iT reg generation in vivo. GFP 2 CD4 + T cells were isolated from Foxp3-GFP mice and sorted forlack of GFPexpression. 2610 5 GFP 2 cells were transferred to the indicated recipient mice i.v. Mice were left untreated or infected with H. pylori SS1 for 8 weeks. RNA was isolated from gastric tissue to determine relative GFP expression in the stomach. Each group contained 3-6 mice. Bar graph represents mean 6 SD. N.D = not detectable. *, P,0.05. doi:10.1371/journal.pone.0066914.g007 pylori infection and the reduced incidence of asthma in a variety of studies [24,27,32], it will be interesting to further dissect how IRAK-M affects the host response in H. pylori infection, and whether it has consequences at other mucosal sites such as the lung. We are currently working on further elucidating the role of IRAK-M in H. pylori infection and looking at parameters of the immune response outside of DCs activation.
In summary, we present data to demonstrate that H. pylori upregulates IRAK-M expression in DCs. We also show that IRAK-M normally functions to downregulate events associated with immune activation such as MHCII expression and MIP-2 production, and promotes regulatory activity such as the production of IL-10 and expression of PD-L1. IRAK-M expression as well as the activities associated with IRAK-M were dependent upon TLR2, and to a lesser extent TLR4 activation. However, we were unable to demonstrate that IRAK-M plays a role in skewing the balance between T H 17 and T reg cells. Thus, the manifestation of IRAK-M expression may be in limitations in acute or innate host responses. It will be noteworthy to explore how IRAK-M may affect the variety of disease outcomes in H. pylori infection and whether there may be any therapeutic potential in modulating IRAK-M expression. Figure S1 GM-CSF BMDCs and Flt3L BMDCs share similar cytokine profiles when IRAK-M is deficient.

Supporting Information
Supernatant from WT and IRAK-M 2/2 BMDCs generated by the two different methods stimulated with either live H. pylori SS1 (MOI 10) or SS1 and 26695 antigen lysate were collected at 24 h and used to determine TNFa and IL-10 levels by ELISA. Data reflects two independent experiments. Error bars indicate standard deviations. *, P,0.05. (TIF) Figure S2 WT and IRAK-M deficient BMDCs have similar T cell differentiation capabilities in the presence of H. pylori stimulation. BMDCs isolated from WT and IRAK-M 2/2 mice were plated and pulsed with either media or H. pylori SS1 lysate for 2 hours before CD4+ T cells isolated from SS1 infected C56BL/6 animals were added to the wells for 72 hours. Cells were restimulated with PMA and ionomycin in the presence of monesin, and production of (A) IFNc, (B) IL-17A or (C) Foxp3 in CD4 + T cells was measured by flow cytometry. (TIF)