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Allele Workbench: Transcriptome Pipeline and Interactive Graphics for Allele-Specific Expression

Figure 3

viewAW drawing of a gene with three transcripts and 11 variants.

The black exons are non-coding. The coding exons that are stacked but are different colors have different coordinates, e.g. the stack with two pink exons (the same) and a blue (different). The long vertical lines represent SNPs (black) and indels (red); if the number below the variant line is followed by an “*”, then it is AI (p-value <0.05) for at least one library, e.g. variant #2 is AI for libraries NYfBr and NYfLiv.

Figure 3