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canEvolve: A Web Portal for Integrative Oncogenomics

Figure 3

Network visualization by interfacing Cytoscape from canEvolve.

(A) ARACNE reconstructed gene regulatory network for the transcription factor SP1 using the multiple myeloma dataset GSE6477. (B) Experimentally validated and predicted Human protein-protein interaction network of SP1 derived from the STRING database at the threshold of 0.993. The three lines connecting SP1 to different proteins show distinct evidence types as used by STRING.

Figure 3

doi: https://doi.org/10.1371/journal.pone.0056228.g003