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Automatic Compilation from High-Level Biologically-Oriented Programming Language to Genetic Regulatory Networks

Figure 8

A Proto dataflow computation is compiled to an abstract genetic regulatory network in two stages.

First, each operator is mapped to a motif and each dataflow edge is mapped to a regulatory protein (blue dotted lines). These elements are then linked together using the structure of the dataflow graph to form an abstract genetic regulatory network (red dotted lines).

Figure 8