Quantitative proteomic analysis of longissimus dorsi muscle in Chinese and Western pigs using DIA mass spectrometry with PRM validation
Fig 2
Differentially expressed proteins (DEPs) between the HS and YY pig’s groups.
(A) bar char plot of proteins in the HS and YY pig’s groups. (B) Volcano plot of proteins in the HS and YY pig’s groups. (C)Protein Expression Pattern Analysis. The expression values of DEPs, represented as log₂FC, were utilized as input for cluster analysis. Red indicates proteins up-regulated in both HS and YY pigs, while blue signifies proteins down-regulated in both breeds. (D)Venn diagram of differential proteins (E) Subcellular localization chart of DEPs.