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Open Access
Peer-reviewed
Research Article
Metagenomic shotgun sequencing of blood to identify bacteria and viruses in leukemic febrile neutropenia
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Prakhar Vijayvargiya,
Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Validation, Visualization, Writing – original draft
Affiliations Division of Infectious Diseases, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America, Division of Infectious Diseases, University of Mississippi Medical Center, Jackson, Mississippi, United States of America
⨯ - Adeline Feri,
- Mathilde Mairey,
- Cécile Rouillon,
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Patricio R. Jeraldo,
Roles Data curation
Affiliations Department of Surgery, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America, Center for Individualized Medicine, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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Zerelda Esquer Garrigos,
Roles Conceptualization, Writing – review & editing
Affiliations Division of Infectious Diseases, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America, Division of Infectious Diseases, University of Mississippi Medical Center, Jackson, Mississippi, United States of America
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Matthew J. Thoendel,
Roles Conceptualization, Writing – review & editing
Affiliation Division of Infectious Diseases, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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Kerryl E. Greenwood-Quaintance,
Roles Conceptualization, Data curation, Supervision, Writing – review & editing
Affiliation Division of Clinical Microbiology, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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M. Rizwan Sohail,
Roles Conceptualization, Supervision, Writing – review & editing
Affiliation Division of Infectious Diseases, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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Priya Sampathkumar,
Roles Conceptualization, Supervision, Writing – review & editing
Affiliation Division of Infectious Diseases, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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Megan T. Spychalla,
Roles Investigation, Writing – review & editing
Affiliation Division of Hematology, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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A. K. Stewart,
Roles Conceptualization, Supervision, Writing – review & editing
Affiliation Division of Hematology/Oncology, Mayo Clinic College of Medicine and Science, Scottsdale, Arizona, United States of America
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Mrinal M. Patnaik,
Roles Conceptualization, Supervision, Writing – review & editing
Affiliation Division of Hematology, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
⨯ -
Aaron J. Tande,
Roles Conceptualization, Investigation, Supervision, Writing – review & editing
Affiliation Division of Infectious Diseases, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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Stéphane Cruveiller,
Roles Data curation, Resources, Writing – review & editing
Affiliation PathoQuest SAS, Paris, France
⨯ -
Irene Hannet,
Roles Data curation, Investigation, Writing – review & editing
Affiliation PathoQuest SAS, Paris, France
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Pascale Beurdeley,
Roles Conceptualization, Data curation, Writing – review & editing
Affiliation PathoQuest SAS, Paris, France
⨯ - [ ... ],
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Robin Patel
Roles Conceptualization, Formal analysis, Investigation, Methodology, Project administration, Resources, Supervision, Writing – review & editing
* E-mail: patel.robin@mayo.edu
Affiliations Division of Infectious Diseases, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America, Division of Clinical Microbiology, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, United States of America
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Metagenomic shotgun sequencing of blood to identify bacteria and viruses in leukemic febrile neutropenia
- Prakhar Vijayvargiya,
- Adeline Feri,
- Mathilde Mairey,
- Cécile Rouillon,
- Patricio R. Jeraldo,
- Zerelda Esquer Garrigos,
- Matthew J. Thoendel,
- Kerryl E. Greenwood-Quaintance,
- M. Rizwan Sohail,
- Priya Sampathkumar
- Published: June 16, 2022
- https://doi.org/10.1371/journal.pone.0269405