ReadDepth: A Parallel R Package for Detecting Copy Number Alterations from Short Sequencing Reads

Open Access

Peer-reviewed

Research Article

Christopher A. Miller,

Affiliations Graduate Program in Structural and Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, Texas, United States of America, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America
⨯
Oliver Hampton,

Affiliations Graduate Program in Structural and Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, Texas, United States of America, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America
⨯
Cristian Coarfa,

Affiliation Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America
⨯
Aleksandar Milosavljevic

* E-mail: amilosav@bcm.edu

Affiliations Graduate Program in Structural and Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, Texas, United States of America, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America
⨯

Reader Comments (1)

Genomics
Is the Subject Area "Genomics" applicable to this article?

Thanks for your feedback.
Cancer genomics
Is the Subject Area "Cancer genomics" applicable to this article?

Thanks for your feedback.
Algorithms
Is the Subject Area "Algorithms" applicable to this article?

Thanks for your feedback.
Methylation
Is the Subject Area "Methylation" applicable to this article?

Thanks for your feedback.
Simulation and modeling
Is the Subject Area "Simulation and modeling" applicable to this article?

Thanks for your feedback.
Epigenomics
Is the Subject Area "Epigenomics" applicable to this article?

Thanks for your feedback.
Genome sequencing
Is the Subject Area "Genome sequencing" applicable to this article?

Thanks for your feedback.
Statistical models
Is the Subject Area "Statistical models" applicable to this article?

Thanks for your feedback.