Automatic Structural Parcellation of Mouse Brain MRI Using Multi-Atlas Label Fusion

Da Ma; Manuel J. Cardoso; Marc Modat; Nick Powell; Jack Wells; Holly Holmes; Frances Wiseman; Victor Tybulewicz; Elizabeth Fisher; Mark F. Lythgoe; Sébastien Ourselin

doi:10.1371/journal.pone.0086576

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Open Access

Peer-reviewed

Research Article

Automatic Structural Parcellation of Mouse Brain MRI Using Multi-Atlas Label Fusion

Da Ma ,

* E-mail: d.ma.11@ucl.ac.uk

Affiliations Centre for Medical Imaging Computing, University College London, London, England, United Kingdom, Centre for Advanced Biomedical Imaging, Division of Medicine, University College London, London, England, United Kingdom
⨯
Manuel J. Cardoso,

Affiliation Centre for Medical Imaging Computing, University College London, London, England, United Kingdom
⨯
Marc Modat,

Affiliation Centre for Medical Imaging Computing, University College London, London, England, United Kingdom
⨯
Nick Powell,

Affiliations Centre for Medical Imaging Computing, University College London, London, England, United Kingdom, Centre for Advanced Biomedical Imaging, Division of Medicine, University College London, London, England, United Kingdom
⨯
Jack Wells,

Affiliation Centre for Advanced Biomedical Imaging, Division of Medicine, University College London, London, England, United Kingdom
⨯
Holly Holmes,

Affiliation Centre for Advanced Biomedical Imaging, Division of Medicine, University College London, London, England, United Kingdom
⨯
Frances Wiseman,

Affiliation Department of Neurodegenerative Disease, Institute of Neurology, University College London, London, England, United Kingdom
⨯
Victor Tybulewicz,

Affiliation Division of Immune Cell Biology, MRC National Institute for Medical Research, London, England, United Kingdom
⨯
Elizabeth Fisher,

Affiliation Department of Neurodegenerative Disease, Institute of Neurology, University College London, London, England, United Kingdom
⨯
Mark F. Lythgoe,

Affiliation Centre for Advanced Biomedical Imaging, Division of Medicine, University College London, London, England, United Kingdom
⨯
Sébastien Ourselin

Affiliation Centre for Medical Imaging Computing, University College London, London, England, United Kingdom
⨯

Automatic Structural Parcellation of Mouse Brain MRI Using Multi-Atlas Label Fusion

Da Ma,
Manuel J. Cardoso,
Marc Modat,
Nick Powell,
Jack Wells,
Holly Holmes,
Frances Wiseman,
Victor Tybulewicz,
Elizabeth Fisher,
Mark F. Lythgoe

Published: January 27, 2014
https://doi.org/10.1371/journal.pone.0086576

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Atlas available for download

Posted by dancebean on 03 Apr 2019 at 03:42 GMT

The mouse brain atlas is also available for download now at: https://github.com/danceb.... The folder structure organized are organized to run the code.

No competing interests declared.

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Automatic Structural Parcellation of Mouse Brain MRI Using Multi-Atlas Label Fusion

Automatic Structural Parcellation of Mouse Brain MRI Using Multi-Atlas Label Fusion

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Atlas available for download

Posted by dancebean on 03 Apr 2019 at 03:42 GMT