About the Authors

Sanja Vanhatalo

Roles Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Visualization, Writing – original draft, Writing – review & editing

Affiliations Research Center for Infections and Immunity, Institute of Biomedicine, University of Turku, Turku, Finland, Laboratory Division, Department of Clinical Microbiology, Turku University Hospital, Turku, Finland

Eveliina Munukka

Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Validation, Writing – review & editing

Affiliations Faculty of Medicine, Microbiome Biobank, University of Turku and Turku University Hospital, Turku, Finland, Biocodex Nordics, Espoo, Finland

Teemu Kallonen

Roles Formal analysis, Investigation, Methodology, Software, Validation, Writing – review & editing

Affiliations Research Center for Infections and Immunity, Institute of Biomedicine, University of Turku, Turku, Finland, Laboratory Division, Department of Clinical Microbiology, Turku University Hospital, Turku, Finland, Faculty of Medicine, Microbiome Biobank, University of Turku and Turku University Hospital, Turku, Finland

Suvi Sippola

Roles Conceptualization, Data curation, Methodology, Writing – review & editing

Affiliations Division of Digestive Surgery and Urology, Turku University Hospital, Turku, Finland, Department of Surgery, University of Turku, Turku, Finland

Juha Grönroos

Roles Conceptualization, Funding acquisition, Methodology, Resources, Writing – review & editing

Affiliations Division of Digestive Surgery and Urology, Turku University Hospital, Turku, Finland, Department of Surgery, University of Turku, Turku, Finland

Jussi Haijanen

Roles Data curation, Investigation, Writing – review & editing

Affiliations Division of Digestive Surgery and Urology, Turku University Hospital, Turku, Finland, Department of Surgery, University of Turku, Turku, Finland

Antti J. Hakanen

Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – review & editing

Affiliations Research Center for Infections and Immunity, Institute of Biomedicine, University of Turku, Turku, Finland, Laboratory Division, Department of Clinical Microbiology, Turku University Hospital, Turku, Finland, Faculty of Medicine, Microbiome Biobank, University of Turku and Turku University Hospital, Turku, Finland

Paulina Salminen

Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Writing – review & editing

paulina.salminen@tyks.fi

Affiliations Division of Digestive Surgery and Urology, Turku University Hospital, Turku, Finland, Department of Surgery, University of Turku, Turku, Finland

Competing Interests

EM is currently working as full-time Medical Advisor for Biocodex Nordics. PS reports receiving personal fees for lectures form Merck and Orion Pharma. AJH reports receiving personal fees for lectures from BioCodex, Merck and Pfizer. This does not alter our adherence to PLOS ONE policies on sharing data and materials. All other authors declare no competing interests.