About the Authors

Benjamin Glasset

Roles Conceptualization, Formal analysis, Methodology, Validation, Writing – original draft

Affiliations Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France, Université Paris-Est, Anses, Laboratory for Food Safety, Maisons-Alfort, France

Sabine Herbin

Roles Conceptualization, Formal analysis, Methodology, Resources, Software, Supervision, Writing – review & editing

Affiliation Université Paris-Est, Anses, Laboratory for Food Safety, Maisons-Alfort, France

Sophie A. Granier

Roles Conceptualization, Methodology, Supervision

Affiliation Université Paris-Est, Anses, Laboratory for Food Safety, Maisons-Alfort, France

Laurent Cavalié

Roles Methodology, Resources

Affiliation CHU Toulouse, Service de Bactériologie-Hygiène, IRSD, Université de Toulouse, INSERM, INRA, ENVT, UPS, Toulouse, France

Emilie Lafeuille

Roles Methodology, Resources

Affiliations Sorbonne Universités, UPMC Univ Paris 06, Inserm, U1135, Centre d’Immunologie et des Maladies Infectieuses (CIMI-Paris), Paris, France, Laboratoire de Bactériologie-Hygiène, Hôpitaux Universitaires Pitié-Salpêtrière-Charles Foix, APHP, Paris, France

Cyprien Guérin

Roles Formal analysis, Methodology, Software

Affiliation MaiAGE, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France

Raymond Ruimy

Roles Methodology, Resources, Validation

Affiliation CHU Nice, Laboratoire de bactériologie, Nice, France

Florence Casagrande-Magne

Roles Methodology, Resources

Affiliation CHU Nice, Laboratoire de bactériologie, Nice, France

Marion Levast

Roles Methodology, Resources

Affiliation Hôpital de Chambéry, Laboratoire de Biologie Médicale, Chambéry, France

Nathalie Chautemps

Roles Methodology, Resources

Affiliation Hôpital de Chambéry, Laboratoire de Biologie Médicale, Chambéry, France

Jean-Winoc Decousser

Roles Methodology, Resources

Affiliation Hôpitaux Universitaires Paris-Sud Antoine Béclère, Laboratoire Hygiène, Clamart, France

Laure Belotti

Roles Methodology, Resources

Affiliation CHU Strasbourg, Laboratoire d’hygiène hospitalière, Strasbourg, France

Isabelle Pelloux

Roles Methodology, Resources

Affiliation CHU Grenoble, Laboratoire de Bactériologie, Grenoble, France

Jerôme Robert

Roles Methodology, Resources, Writing – review & editing

Affiliations Sorbonne Universités, UPMC Univ Paris 06, Inserm, U1135, Centre d’Immunologie et des Maladies Infectieuses (CIMI-Paris), Paris, France, Laboratoire de Bactériologie-Hygiène, Hôpitaux Universitaires Pitié-Salpêtrière-Charles Foix, APHP, Paris, France

Anne Brisabois

Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Resources, Supervision, Writing – review & editing

Affiliation Université Paris-Est, Anses, Laboratory for Food Safety, Maisons-Alfort, France

Nalini Ramarao

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

nalini.ramarao@inra.fr

Affiliation Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France

Competing Interests

The authors have declared that no competing interests exist.