Inferring Regulatory Networks from Expression Data Using Tree-Based Methods

Vân Anh Huynh-Thu; Alexandre Irrthum; Louis Wehenkel; Pierre Geurts

doi:10.1371/journal.pone.0012776

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Open Access

Peer-reviewed

Research Article

Inferring Regulatory Networks from Expression Data Using Tree-Based Methods

Vân Anh Huynh-Thu ,

* E-mail: vahuynh@ulg.ac.be

Affiliations Department of Electrical Engineering and Computer Science, Systems and Modeling, University of Liège, Liège, Belgium, GIGA-Research, Bioinformatics and Modeling, University of Liège, Liège, Belgium
⨯
Alexandre Irrthum,

Affiliations Department of Electrical Engineering and Computer Science, Systems and Modeling, University of Liège, Liège, Belgium, GIGA-Research, Bioinformatics and Modeling, University of Liège, Liège, Belgium
⨯
Louis Wehenkel,

Affiliations Department of Electrical Engineering and Computer Science, Systems and Modeling, University of Liège, Liège, Belgium, GIGA-Research, Bioinformatics and Modeling, University of Liège, Liège, Belgium
⨯
Pierre Geurts

Affiliations Department of Electrical Engineering and Computer Science, Systems and Modeling, University of Liège, Liège, Belgium, GIGA-Research, Bioinformatics and Modeling, University of Liège, Liège, Belgium
⨯

Inferring Regulatory Networks from Expression Data Using Tree-Based Methods

Vân Anh Huynh-Thu,
Alexandre Irrthum,
Louis Wehenkel,
Pierre Geurts

Published: September 28, 2010
https://doi.org/10.1371/journal.pone.0012776

About the Authors

Vân Anh Huynh-Thu

* E-mail: vahuynh@ulg.ac.be

Affiliations Department of Electrical Engineering and Computer Science, Systems and Modeling, University of Liège, Liège, Belgium, GIGA-Research, Bioinformatics and Modeling, University of Liège, Liège, Belgium

Alexandre Irrthum

Louis Wehenkel

Pierre Geurts

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: VAHT PG. Performed the experiments: VAHT. Analyzed the data: VAHT AI LW PG. Wrote the paper: VAHT AI LW PG.

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Gene regulation
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Regulator genes
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Trees
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Genetic networks
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Gene expression
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Gene regulatory networks
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Algorithms
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Machine learning
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