Citation: Rivers C, Pollett S, Viboud C (2020) The opportunities and challenges of an Ebola modeling research coordination group. PLoS Negl Trop Dis 14(7): e0008158. https://doi.org/10.1371/journal.pntd.0008158
Editor: Adam Akullian, Institute for Disease Modeling, UNITED STATES
Published: July 16, 2020
This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.
Funding: The author(s) received no specific funding for this work.
Competing interests: The authors have declared that no competing interests exist.
In response to the protracted Ebola virus outbreak in the Democratic Republic of Congo, the international public health community called for increased attention, coordination, and resources to support the response. The use of real-time modeling and analytics to support public health decision-making (also known as “outbreak science”) has been an important capability that has grown during previous outbreaks [1–3]. Despite the informative role that infectious disease models played in the recent DRC outbreak [4–7], cross-talk within the infectious disease modeling community and between infectious disease modelers and model stakeholders, such as health agencies, may be limited. Lack of communication can reduce the potential use of modeling capability to inform outbreak prevention and mitigation strategies. For example, mathematical modelers may not be aware of questions that would be particularly useful for guiding the response, such as the location and staffing of Ebola treatment units. On the other end, public health teams may not be aware of outbreak features that may signal improvement or worsening of incidence or increased potential for spatial spread.
To improve communication and create awareness of the efforts of modeling groups already studying the DRC Ebola outbreak, we—an existing outbreak science working group—convened an informal modeling research coordination group to align efforts around infectious disease modeling of the outbreak (Fig 1). Each month, two modeling teams were invited to present their preliminary research to the group via video conferencing. Participants were invited to ask questions, make suggestions and critiques, and share ideas. Broader discussion of current challenges and open questions in directing the response were encouraged. Over 170 participants from governments, academia, and nongovernmental organizations from around the world signed up to receive invitations to the meeting. Approximately 40 stakeholders were on any given call, including those with Ebola response activities. Teleconference calls were supplemented by communication through a Slack-enabled virtual workspace, public and private GitHub repositories, and a mailing list. The emphasis on this modeling coordination framework was to facilitate scientific research exchange.
The presentations throughout the seven months of this modeling coordination group meetings highlighted some of the ways this DRC outbreak differed to the prior 2014 West African outbreak. The impact of violence itself on epidemic growth and effective response was also a major focus of modeling efforts . Shifts and development of data sources since 2014 West African modeling efforts were also conspicuous, particularly in the domain of social sciences. For example, social media mining was used to measure community sentiment and estimate how this may impact Ebola response and countermeasure implementation . Socio-economic, demographic, and environmental data were used in ecological models which predicted the location and risk of future Ebola epidemics in Africa . The group heard perspectives of an anthropologist who provided lessons learned on the social context of Uganda Ebola outbreak responses, of major relevance to DRC Ebola models. While genomic modeling played a key role in the 2014 West African epidemic, presentations at this modeling group indicated how these tools had matured with inclusions of interpretative narratives accompanying real-time phylogenies to improve their interpretation and use by field epidemiologists . Unlike the prior West African epidemic, licensed Ebola vaccines were available and were implemented as a licensed product countermeasure, and models have played a key role in guiding vaccination strategies and vaccine demand .
This working group was not formally endorsed by any agency or formally tasked with supporting any specific public health activity in the DRC. It was not intended to replace formal modeling groups who had already been tasked to support the Ebola response and is distinctly different from epidemic surveillance sharing platforms such as the Global Public Health Intelligence Network or the Epidemic Intelligence Information System [13,14]. However, we propose that this community forum was complementary to those efforts and served several valuable purposes. It allowed early modeling results to be shared with other modelers and model stakeholders, with the goal of enabling more efficient and effective infectious disease modeling relevant to this particular outbreak. Although preprint servers and other rapid publication venues are useful for sharing relatively early modeling results, there are still consequential delays between the generation and reporting of results, making them of limited use in the field [15,16]. The DRC modeling coordination group aimed to minimize this gap by providing a unique opportunity for discussion of prepublication results and provides a platform for data sharing where feasible. It also facilitated awareness about the most important and timely public health questions that modelers and other researchers could help to address to reduce duplication and ensure that modelers were answering the right questions at the right time. Finally, it allowed resources such as open access data and parameter estimates to be shared, thereby improving model quality, comparability, and efficiency of the modeling process.
The Ebola modeling coordination group also highlighted the pervasive complexities of conducting research during epidemics. For example, there is a need to balance broad participation of scientists to study and help resolve the crisis while also deferring to the more urgent priorities of health authorities who are engaged in the critical public health response as well as respecting existing local and international research efforts already formally tasked with supporting the outbreak. It is also a priority to conduct equitable research by collaborating with locally-based scientists so that they are properly involved in and credited with the international scientific response, including data collection efforts. We propose that coordination groups, like the one described here, could help with that. Moreover, we have demonstrated how this model coordination framework could readily be adopted by other groups for future epidemics and indeed has been so in the current COVID-19 outbreak .
Material has been reviewed by the Walter Reed Army Institute of Research. There is no objection to its presentation and/or publication. The opinions or assertions contained herein are the private views of the author and are not to be construed as official or as reflecting true views of the Department of the Army or the Department of Defense. The contents, views or opinions expressed in this publication or presentation are those of the author(s) and do not necessarily reflect official policy or position of Uniformed Services University of the Health Sciences.
- 1. Morgan O. How decision makers can use quantitative approaches to guide outbreak responses. Philos Trans R Soc B Biol Sci. 2019 Jul 8;374(1776):20180365.
- 2. Polonsky JA, Baidjoe A, Kamvar ZN, Cori A, Durski K, Edmunds WJ, et al. Outbreak analytics: a developing data science for informing the response to emerging pathogens. Philos Trans R Soc B Biol Sci. 2019 Jul 8;374(1776):20180276.
- 3. Rivers C, Chretien J-P, Riley S, Pavlin JA, Woodward A, Brett-Major D, et al. Using “outbreak science” to strengthen the use of models during epidemics. Nat Commun. 2019 Jul 15;10(1):1–3.
- 4. Camacho A, Kucharski AJ, Funk S, Breman J, Piot P, Edmunds WJ. Potential for large outbreaks of Ebola virus disease. EPIDEMICS. 2014 Dec;9:70–8. pmid:25480136
- 5. Halloran ME, Vespignani A, Bharti N, Feldstein LR, Alexander KA, Ferrari M, et al. Ebola: Mobility data. Science. 2014 Oct 24;346(6208):433–433.
- 6. Kelly JD, Worden L, Wannier R, Hoff NA, Mukadi P, Sinai C, et al. Real-time projections of Ebola outbreak size and duration with and without vaccine use in Équateur, Democratic Republic of Congo, as of May 27, 2018. bioRxiv. 2018 Jan 1;331447.
- 7. Worden L, Wannier R, Hoff NA, Musene K, Selo B, Mossoko M, et al. Real-time projections of epidemic transmission and estimation of vaccination impact during an Ebola virus disease outbreak in Northeastern Democratic Republic of Congo. bioRxiv. 2019 Jan 1;461285.
- 8. Wannier SR, Worden L, Hoff NA, Amezcua E, Selo B, Sinai C, et al. Estimating the impact of violent events on transmission in Ebola virus disease outbreak, Democratic Republic of the Congo, 2018–2019. Epidemics. 2019 Sep;28:100353. pmid:31378584
- 9. Aiken EL, McGough SF, Majumder MS, Wachtel G, Nguyen AT, Viboud C, et al. Real-time Estimation of Disease Activity in Emerging Outbreaks using Internet Search Information [Internet]. Health Informatics; 2019 Nov [cited 2020 Feb 10]. Available from: http://medrxiv.org/lookup/doi/10.1101/19010470
- 10. Redding DW, Atkinson PM, Cunningham AA, Lo Iacono G, Moses LM, Wood JLN, et al. Impacts of environmental and socio-economic factors on emergence and epidemic potential of Ebola in Africa. Nat Commun [Internet]. 2019 Dec [cited 2020 Feb 10]. 10(1). Available from: http://www.nature.com/articles/s41467-019-12499-6
- 11. Arias A, Watson SJ, Asogun D, Tobin EA, Lu J, Phan MVT, et al. Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases. Virus Evol. 2016 Jan;2(1):vew016. pmid:28694998
- 12. Northeastern University researchers are working with the World Health Organization to stop the spread of Ebola [Internet]. [cited 2020 Feb 10]. Available from: https://news.northeastern.edu/2019/08/14/northeastern-university-researchers-are-working-with-the-world-health-organization-to-stop-the-spread-of-ebola/
- 13. Epidemic intelligence tools and information resources [internet]. European Centre for Disease Prevention and Control. [cited 2020 Feb 10]. Available from: https://www.ecdc.europa.eu/en/threats-and-outbreaks/epidemic-intelligence
- 14. WHO | Epidemic intelligence—systematic event detection [internet]. [cited 2020 Feb 10]. Available from: https://www.who.int/csr/alertresponse/epidemicintelligence/en/
- 15. Chowell G, Nishiura H. Toward unbiased assessment of treatment and prevention: modeling household transmission of pandemic influenza. BMC Med. 2012 Oct 9;10:118. pmid:23046539
- 16. Kobres P-Y, Chretien J-P, Johansson MA, Morgan JJ, Whung P-Y, Mukundan H, et al. A systematic review and evaluation of Zika virus forecasting and prediction research during a public health emergency of international concern. Pimenta PFP, editor. PLoS Negl Trop Dis. 2019 Oct 4;13(10):e0007451. pmid:31584946
- 17. Li Q, Guan X, Wu P, Wang X, Zhou L, Tong Y, et al. Early Transmission Dynamics in Wuhan, China, of Novel Coronavirus–Infected Pneumonia. N Engl J Med [Internet]. 2020 Jan 29 [cited 2020 Feb 10]. Available from: http://www.nejm.org/doi/10.1056/NEJMoa2001316