Laboratory and molecular surveillance of paediatric typhoidal Salmonella in Nepal: Antimicrobial resistance and implications for vaccine policy

• Carl D. Britto ,

  Contributed equally to this work with: Carl D. Britto, Zoe A. Dyson

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Validation, Writing – original draft, Writing – review & editing

  * E-mail: carl.britto@paediatrics.ox.ac.uk

  Affiliation Oxford Vaccine Group, Department of Paediatrics, University of Oxford and the NIHR Oxford Biomedical Research Centre, Oxford, United Kingdom

  http://orcid.org/0000-0002-1674-8801

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• Zoe A. Dyson ,

  Contributed equally to this work with: Carl D. Britto, Zoe A. Dyson

  Roles Data curation, Formal analysis, Methodology, Validation, Visualization, Writing – review & editing

  Affiliation Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria, Australia

  http://orcid.org/0000-0002-8887-3492

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• Sebastian Duchene,

  Roles Formal analysis, Methodology, Writing – review & editing

  Affiliation Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria, Australia

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• Michael J. Carter,

  Roles Data curation, Writing – review & editing

  Affiliation Oxford Vaccine Group, Department of Paediatrics, University of Oxford and the NIHR Oxford Biomedical Research Centre, Oxford, United Kingdom

  http://orcid.org/0000-0003-3403-4746

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• Meeru Gurung,

  Roles Data curation, Project administration

  Affiliation Oxford University Clinical Research Unit-Patan Academy of Health Sciences, Patan, Nepal

  http://orcid.org/0000-0003-4366-6403

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• Dominic F. Kelly,

  Roles Conceptualization, Methodology

  Affiliation Oxford Vaccine Group, Department of Paediatrics, University of Oxford and the NIHR Oxford Biomedical Research Centre, Oxford, United Kingdom

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• David R. Murdoch,

  Roles Data curation, Project administration, Writing – review & editing

  Affiliation University of Otago, Christchurch, New Zealand

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• Imran Ansari,

  Roles Data curation, Project administration, Supervision

  Affiliation Oxford University Clinical Research Unit-Patan Academy of Health Sciences, Patan, Nepal

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• Stephen Thorson,

  Roles Data curation, Project administration, Writing – review & editing

  Affiliation Oxford University Clinical Research Unit-Patan Academy of Health Sciences, Patan, Nepal

  http://orcid.org/0000-0002-9546-6406

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• Shrijana Shrestha,

  Roles Data curation, Project administration

  Affiliation Oxford University Clinical Research Unit-Patan Academy of Health Sciences, Patan, Nepal

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• Neelam Adhikari,

  Roles Data curation, Project administration

  Affiliation Oxford University Clinical Research Unit-Patan Academy of Health Sciences, Patan, Nepal

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• Gordon Dougan,

  Roles Funding acquisition, Writing – review & editing

  Affiliation Wellcome Trust Sanger Institute and the Department of Medicine, Cambridge University, Cambridge, United Kingdom

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• Kathryn E. Holt ,

  Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  ¶‡ KEH and AJP are joint senior authors

  Affiliation Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria, Australia

  http://orcid.org/0000-0003-3949-2471

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• Andrew J. Pollard

  Roles Conceptualization, Data curation, Funding acquisition, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing

  ¶‡ KEH and AJP are joint senior authors

  Affiliation Oxford Vaccine Group, Department of Paediatrics, University of Oxford and the NIHR Oxford Biomedical Research Centre, Oxford, United Kingdom

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