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PLOS Computational Biology  
Linear discriminant analysis reveals hidden patterns in NMR chemical shifts of intrinsically disordered proteins

Javier A. Romero, Paulina Putko, Mateusz Urbańczyk, Krzysztof Kazimierczuk, Anna Zawadzka-Kazimierczuk

Research Article | published 06 Oct 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010258

Views: 1651Citations: 5Saves: 19 • Shares: 7

Positional SHAP (PoSHAP) for Interpretation of machine learning models trained from biological sequences

Quinn Dickinson, Jesse G. Meyer

Research Article | published 28 Jan 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1009736

Views: 5725Citations: 32Saves: 63 • Shares: 6

A thermodynamically consistent model of the post-translational Kai circadian clock

Joris Paijmans, David K. Lubensky, Pieter Rein ten Wolde

Research Article | published 15 Mar 2017 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1005415

Views: 4673Citations: 45Saves: 30 • Shares: 6

Phosphorylation Variation during the Cell Cycle Scales with Structural Propensities of Proteins

Stefka Tyanova, Jürgen Cox, Jesper Olsen, Matthias Mann, Dmitrij Frishman

Research Article | published 10 Jan 2013 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1002842

Views: 13109Citations: 58Saves: 126 • Shares: 1

Constraint-Based Model of Shewanella oneidensis MR-1 Metabolism: A Tool for Data Analysis and Hypothesis Generation

Grigoriy E. Pinchuk, Eric A. Hill, Oleg V. Geydebrekht, Jessica De Ingeniis, Xiaolin Zhang, Andrei Osterman, James H. Scott, Samantha B. Reed, Margaret F. Romine, Allan E. Konopka, Alexander S. Beliaev, Jim K. Fredrickson, Jennifer L. Reed

Research Article | published 24 Jun 2010 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1000822

Views: 13246Citations: 117Saves: 202 • Shares: 0

Disordered Flanks Prevent Peptide Aggregation

Sanne Abeln, Daan Frenkel

Research Article | published 19 Dec 2008 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1000241

Views: 5908Citations: 61Saves: 0 • Shares: 0

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