- Quantitative and Kinetic Proteomics Reveal ApoE Isoform-dependent Proteostasis Adaptations in Mouse Brain
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Research Article | published 12 Dec 2024 PLOS Computational Biology
- Oscillatory dynamics of Rac1 activity in Dictyostelium discoideum amoebae
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Research Article | published 09 Dec 2024 PLOS Computational Biology
- Building, benchmarking, and exploring perturbative maps of transcriptional and morphological data
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Research Article | published 01 Oct 2024 PLOS Computational Biology
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
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Research Article | published 25 Jul 2024 PLOS Computational Biology
- ToxoNet: A high confidence map of protein-protein interactions in Toxoplasma gondii
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Research Article | published 20 Jun 2024 PLOS Computational Biology
- Computational prediction of protein interactions in single cells by proximity sequencing
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Research Article | published 14 Mar 2024 PLOS Computational Biology
- Comparative Clustering (CompaCt) of eukaryote complexomes identifies novel interactions and sheds light on protein complex evolution
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Research Article | published 07 Aug 2023 PLOS Computational Biology
- ProInfer: An interpretable protein inference tool leveraging on biological networks
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Research Article | published 17 Mar 2023 PLOS Computational Biology
- Soft disorder modulates the assembly path of protein complexes
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Research Article | published 17 Nov 2022 PLOS Computational Biology
- Induced fit with replica exchange improves protein complex structure prediction
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Research Article | published 03 Jun 2022 PLOS Computational Biology
- RosettaSurf—A surface-centric computational design approach
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Research Article | published 16 Mar 2022 PLOS Computational Biology
- Diversity of synaptic protein complexes as a function of the abundance of their constituent proteins: A modeling approach
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Research Article | published 18 Jan 2022 PLOS Computational Biology
- A conserved expression signature predicts growth rate and reveals cell & lineage-specific differences
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Research Article | published 11 Nov 2021 PLOS Computational Biology
- Molecular dynamics shows complex interplay and long-range effects of post-translational modifications in yeast protein interactions
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Research Article | published 12 May 2021 PLOS Computational Biology
- Crosstalk and ultrasensitivity in protein degradation pathways
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Research Article | published 28 Dec 2020 PLOS Computational Biology
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