Skip to main content
Advertisement
89 results for
Sort By:
Search Alert
Sign in to save this search alert

Filters:

Protein complexes  
PLOS Computational Biology  
Quantitative and Kinetic Proteomics Reveal ApoE Isoform-dependent Proteostasis Adaptations in Mouse Brain

Nathan R. Zuniga, Noah E. Earls, Ariel E. A. Denos, Jared M. Elison, Benjamin S. Jones, Ethan G. Smith, Noah G. Moran, Katie L. Broce, Gerome M. Romero, Chad D. Hyer, Kimberly B. Wagstaff, Haifa M. Almughamsi, Mark K. Transtrum, John C. Price

Research Article | published 12 Dec 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012407

Views: 493Citations: 0Saves: 0 • Shares: 0

Oscillatory dynamics of Rac1 activity in Dictyostelium discoideum amoebae

Marko Šoštar, Maja Marinović, Vedrana Filić, Nenad Pavin, Igor Weber

Research Article | published 09 Dec 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012025

Views: 377Citations: 0Saves: 0 • Shares: 0

Building, benchmarking, and exploring perturbative maps of transcriptional and morphological data

Safiye Celik, Jan-Christian Hütter, Sandra Melo Carlos, Nathan H. Lazar, Rahul Mohan, Conor Tillinghast, Tommaso Biancalani, Marta M. Fay, Berton A. Earnshaw, Imran S. Haque

Research Article | published 01 Oct 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012463

Views: 4291Citations: 2Saves: 0 • Shares: 23

Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile

Patrick Bryant, Frank Noé

Research Article | published 25 Jul 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012253

Views: 3207Citations: 3Saves: 45 • Shares: 23

ToxoNet: A high confidence map of protein-protein interactions in Toxoplasma gondii

Lakshmipuram S. Swapna, Grant C. Stevens, Aline Sardinha-Silva, Lucas Zhongming Hu, Verena Brand, Daniel D. Fusca, Cuihong Wan, Xuejian Xiong, Jon P. Boyle, Michael E. Grigg, Andrew Emili, John Parkinson

Research Article | published 20 Jun 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012208

Views: 1160Citations: 0Saves: 9 • Shares: 1

Computational prediction of protein interactions in single cells by proximity sequencing

Junjie Xia, Hoang Van Phan, Luke Vistain, Mengjie Chen, Aly A. Khan, Savaş Tay

Research Article | published 14 Mar 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1011915

Views: 1307Citations: 1Saves: 2 • Shares: 2

Comparative Clustering (CompaCt) of eukaryote complexomes identifies novel interactions and sheds light on protein complex evolution

Joeri van Strien, Felix Evers, Madhurya Lutikurti, Stijn L. Berendsen, Alejandro Garanto, Geert-Jan van Gemert, Alfredo Cabrera-Orefice, Richard J. Rodenburg, Ulrich Brandt, Taco W. A. Kooij, Martijn A. Huynen

Research Article | published 07 Aug 2023 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1011090

Views: 900Citations: 1Saves: 0 • Shares: 0

ProInfer: An interpretable protein inference tool leveraging on biological networks

Hui Peng, Limsoon Wong, Wilson Wen Bin Goh

Research Article | published 17 Mar 2023 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010961

Views: 1754Citations: 2Saves: 7 • Shares: 8

Soft disorder modulates the assembly path of protein complexes

Beatriz Seoane, Alessandra Carbone

Research Article | published 17 Nov 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010713

Views: 1851Citations: 8Saves: 10 • Shares: 8

Induced fit with replica exchange improves protein complex structure prediction

Ameya Harmalkar, Sai Pooja Mahajan, Jeffrey J. Gray

Research Article | published 03 Jun 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010124

Views: 3643Citations: 8Saves: 27 • Shares: 8

RosettaSurf—A surface-centric computational design approach

Andreas Scheck, Stéphane Rosset, Michaël Defferrard, Andreas Loukas, Jaume Bonet, Pierre Vandergheynst, Bruno E. Correia

Research Article | published 16 Mar 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1009178

Views: 4846Citations: 5Saves: 31 • Shares: 15

Diversity of synaptic protein complexes as a function of the abundance of their constituent proteins: A modeling approach

Marcell Miski, Bence Márk Keömley-Horváth, Dorina Rákóczi Megyeriné, Attila Csikász-Nagy, Zoltán Gáspári

Research Article | published 18 Jan 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1009758

Views: 2238Citations: 6Saves: 26 • Shares: 3

A conserved expression signature predicts growth rate and reveals cell & lineage-specific differences

Zhisheng Jiang, Serena F. Generoso, Marta Badia, Bernhard Payer, Lucas B. Carey

Research Article | published 11 Nov 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1009582

Views: 3781Citations: 6Saves: 0 • Shares: 0

Molecular dynamics shows complex interplay and long-range effects of post-translational modifications in yeast protein interactions

Nikolina Šoštarić, Vera van Noort

Research Article | published 12 May 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008988

Views: 3215Citations: 15Saves: 30 • Shares: 11

Crosstalk and ultrasensitivity in protein degradation pathways

Abhishek Mallela, Maulik K. Nariya, Eric J. Deeds

Research Article | published 28 Dec 2020 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008492

Views: 2153Citations: 5Saves: 18 • Shares: 5

Results per page

Save this search

Log in to save a search alert