- Using deep learning to decipher the impact of telomerase promoter mutations on the dynamic metastatic morpholome
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Research Article | published 30 Jul 2024 PLOS Computational Biology
- A probabilistic knowledge graph for target identification
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Research Article | published 05 Apr 2024 PLOS Computational Biology
- Unravelling cancer subtype-specific driver genes in single-cell transcriptomics data with CSDGI
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Research Article | published 14 Dec 2023 PLOS Computational Biology
- Explainable multi-task learning improves the parallel estimation of polygenic risk scores for many diseases through shared genetic basis
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Research Article | published 07 Jul 2023 PLOS Computational Biology
- scAmpi—A versatile pipeline for single-cell RNA-seq analysis from basics to clinics
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Research Article | published 03 Jun 2022 PLOS Computational Biology
- Characterization and clustering of kinase isoform expression in metastatic melanoma
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Research Article | published 13 May 2022 PLOS Computational Biology
- A copula based topology preserving graph convolution network for clustering of single-cell RNA-seq data
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Research Article | published 10 Mar 2022 PLOS Computational Biology
- Combination treatment optimization using a pan-cancer pathway model
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Research Article | published 28 Dec 2021 PLOS Computational Biology
- Transcriptomic profiling in canines and humans reveals cancer specific gene modules and biological mechanisms common to both species
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Research Article | published 27 Sep 2021 PLOS Computational Biology
- ISOTOPE: ISOform-guided prediction of epiTOPEs in cancer
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Research Article | published 16 Sep 2021 PLOS Computational Biology
- Reproduction of patterns in melanocytic proliferations by agent-based simulation and geometric modeling
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Research Article | published 04 Feb 2021 PLOS Computational Biology
- Personalized logical models to investigate cancer response to BRAF treatments in melanomas and colorectal cancers
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Research Article | published 28 Jan 2021 PLOS Computational Biology
- Multiobjective optimization identifies cancer-selective combination therapies
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Research Article | published 28 Dec 2020 PLOS Computational Biology
- Determinants of combination GM-CSF immunotherapy and oncolytic virotherapy success identified through in silico treatment personalization
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Research Article | published 27 Nov 2019 PLOS Computational Biology
- SCMarker: Ab initio marker selection for single cell transcriptome profiling
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Research Article | published 28 Oct 2019 PLOS Computational Biology
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