- A computational analysis of the oncogenic and anti-tumor immunity role of P4HA3 in human cancers
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Research Article | published 06 Nov 2024 PLOS Computational Biology
- Quantitative evaluation of DNA damage repair dynamics to elucidate predictors of autism vs. cancer in individuals with germline PTEN variants
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Research Article | published 02 Oct 2024 PLOS Computational Biology
- COPS: A novel platform for multi-omic disease subtype discovery via robust multi-objective evaluation of clustering algorithms
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Research Article | published 05 Aug 2024 PLOS Computational Biology
- A variational autoencoder trained with priors from canonical pathways increases the interpretability of transcriptome data
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Research Article | published 03 Jul 2024 PLOS Computational Biology
- Machine learning and multi-omics data reveal driver gene-based molecular subtypes in hepatocellular carcinoma for precision treatment
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Research Article | published 10 May 2024 PLOS Computational Biology
- DBDNMF: A Dual Branch Deep Neural Matrix Factorization method for drug response prediction
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Research Article | published 04 Apr 2024 PLOS Computational Biology
- Tissue-adjusted pathway analysis of cancer (TPAC): A novel approach for quantifying tumor-specific gene set dysregulation relative to normal tissue
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Research Article | published 11 Jan 2024 PLOS Computational Biology
- Recurrence risk stratification of hepatocellular carcinomas based on immune gene expression and features extracted from pathological images
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Research Article | published 29 Dec 2023 PLOS Computational Biology
- Predicting lncRNA-disease associations based on heterogeneous graph convolutional generative adversarial network
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Research Article | published 29 Nov 2023 PLOS Computational Biology
- Addressing erroneous scale assumptions in microbe and gene set enrichment analysis
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Research Article | published 20 Nov 2023 PLOS Computational Biology
- XA4C: eXplainable representation learning via Autoencoders revealing Critical genes
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Research Article | published 02 Oct 2023 PLOS Computational Biology
- Identifying a developmental transition in honey bees using gene expression data
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Research Article | published 21 Sep 2023 PLOS Computational Biology
- Exploring tumor-normal cross-talk with TranNet: Role of the environment in tumor progression
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Research Article | published 18 Sep 2023 PLOS Computational Biology
- iPiDA-SWGCN: Identification of piRNA-disease associations based on Supplementarily Weighted Graph Convolutional Network
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Research Article | published 20 Jun 2023 PLOS Computational Biology
- Structure learning for gene regulatory networks
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Research Article | published 18 May 2023 PLOS Computational Biology
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