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PLOS Computational Biology  
Dissecting Bayes: Using influence measures to test normative use of probability density information derived from a sample

Keiji Ota, Laurence T. Maloney

Research Article | published 01 May 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1011999

Views: 943Citations: 1Saves: 4 • Shares: 4

Compressive stress gradients direct mechanoregulation of anisotropic growth in the zebrafish jaw joint

Josepha Godivier, Elizabeth A. Lawrence, Mengdi Wang, Chrissy L. Hammond, Niamh C. Nowlan

Research Article | published 08 Feb 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010940

Views: 844Citations: 1Saves: 0 • Shares: 0

Normalization by orientation-tuned surround in human V1-V3

Zeming Fang, Ilona M. Bloem, Catherine Olsson, Wei Ji Ma, Jonathan Winawer

Research Article | published 27 Dec 2023 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1011704

Views: 1019Citations: 2Saves: 0 • Shares: 0

Spatial Configurations of 3D Extracellular Matrix Collagen Density and Anisotropy Simultaneously Guide Angiogenesis

Steven A. LaBelle, A. Marsh Poulson IV, Steve A. Maas, Adam Rauff, Gerard A. Ateshian, Jeffrey A. Weiss

Research Article | published 23 Oct 2023 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1011553

Views: 1319Citations: 2Saves: 9 • Shares: 9

Particle-based model shows complex rearrangement of tissue mechanical properties are needed for roots to grow in hard soil

Matthias Mimault, Mariya Ptashnyk, Lionel X. Dupuy

Research Article | published 07 Mar 2023 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010916

Views: 1468Citations: 3Saves: 5 • Shares: 5

Bayesian inference of multi-point macromolecular architecture mixtures at nanometre resolution

Peter A. Embacher, Tsvetelina E. Germanova, Emanuele Roscioli, Andrew D. McAinsh, Nigel J. Burroughs

Research Article | published 27 Dec 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010765

Views: 1179Citations: 0Saves: 2 • Shares: 1

Image-based parameter inference for epithelial mechanics

Goshi Ogita, Takefumi Kondo, Keisuke Ikawa, Tadashi Uemura, Shuji Ishihara, Kaoru Sugimura

Research Article | published 23 Jun 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010209

Views: 7003Citations: 11Saves: 21 • Shares: 1

Combined computational modeling and experimental analysis integrating chemical and mechanical signals suggests possible mechanism of shoot meristem maintenance

Mikahl Banwarth-Kuhn, Kevin Rodriguez, Christian Michael, Calvin-Khang Ta, Alexander Plong, Eric Bourgain-Chang, Ali Nematbakhsh, Weitao Chen, Amit Roy-Chowdhury, G. Venugopala Reddy, Mark Alber

Research Article | published 21 Jun 2022 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1010199

Views: 2168Citations: 8Saves: 17 • Shares: 1

Effect of cellular rearrangement time delays on the rheology of vertex models for confluent tissues

Gonca Erdemci-Tandogan, M. Lisa Manning

Research Article | published 07 Jun 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1009049

Views: 3160Citations: 25Saves: 38 • Shares: 5

DeepMIB: User-friendly and open-source software for training of deep learning network for biological image segmentation

Ilya Belevich, Eija Jokitalo

Research Article | published 02 Mar 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008374

Views: 6391Citations: 69Saves: 73 • Shares: 23

Defect patterns on the curved surface of fish retinae suggest a mechanism of cone mosaic formation

Hayden Nunley, Mikiko Nagashima, Kamirah Martin, Alcides Lorenzo Gonzalez, Sachihiro C. Suzuki, Declan A. Norton, Rachel O. L. Wong, Pamela A. Raymond, David K. Lubensky

Research Article | published 15 Dec 2020 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008437

Views: 2842Citations: 8Saves: 16 • Shares: 9

Quantification of nematic cell polarity in three-dimensional tissues

André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabián Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial, Frank Jülicher, Benjamin M. Friedrich

Research Article | published 10 Dec 2020 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008412

Views: 3568Citations: 10Saves: 33 • Shares: 22

Biological network growth in complex environments: A computational framework

Torsten Johann Paul, Philip Kollmannsberger

Research Article | published 30 Nov 2020 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008003

Views: 3187Citations: 7Saves: 23 • Shares: 21

Resilience of three-dimensional sinusoidal networks in liver tissue

Jens Karschau, André Scholich, Jonathan Wise, Hernán Morales-Navarrete, Yannis Kalaidzidis, Marino Zerial, Benjamin M. Friedrich

Research Article | published 29 Jun 2020 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1007965

Views: 2480Citations: 16Saves: 30 • Shares: 10

Striated myocyte structural integrity: Automated analysis of sarcomeric z-discs

Tessa Altair Morris, Jasmine Naik, Kirby Sinclair Fibben, Xiangduo Kong, Tohru Kiyono, Kyoko Yokomori, Anna Grosberg

Research Article | published 04 Mar 2020 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1007676

Views: 12947Citations: 41Saves: 75 • Shares: 4

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