VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning
The external dataset includes 31 Escherichia coli, 24 Klebsiella pneumoniae and 21 Pseudomonas aeruginosa isolates. All isolates were tested against 3 antibiotics (cefepime, ceftazidime and meropenem). We reported the accuracy as the fraction of correct predictions, and the AUROC (area under the receiver operator curve) represents the area under the operator-receiver characteristic. The AUROC value is n/a for E. cloacae as all 13 isolates are susceptible to meropenem.