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PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems

Fig 4

HDS computational cost scaling.

Left: Wall-time vs. cell count for the stochastic (red) and deterministic (blue) necrosis necrosis models on a single HPC compute node. Both models show approximately linear cost scaling with the number of cell agents. Right: Wall time vs. cell count for stochastic necrosis model on the desktop workstation (orange) and the single HPC node (green).

Fig 4

doi: https://doi.org/10.1371/journal.pcbi.1005991.g004