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Decoding Structural Properties of a Partially Unfolded Protein Substrate: En Route to Chaperone Binding

Fig 3

Experimental Validation of intermediate structures with HDX-MS data.

A) Red and blue colored regions represents experimental characterization [51], displaying high- and less-protected amide groups, respectively. B) For all the peptide segments, number of hydrogen bonds with solvent molecules is shown. Dotted line indicates mean value of high-protected amide groups. The error bars denote the values computed from three 400 K trajectories populating I2 conformers.

Fig 3

doi: https://doi.org/10.1371/journal.pcbi.1004496.g003