CASER: A semi-supervised model with multi-omics data integration prioritizes cancer-associated epigenetic regulator genes
Fig 5
Evaluation of CASER-predicted cERs by gene set enrichment analysis.
(A) Network visualization of the enriched pathways based on the gene set enrichment analysis results of GOBP pathways. Node represents a specific GOBP pathway, and edges represents numbers of shared genes. The size of nodes corresponds to the number of genes in that pathway, while the color gradient represents the -log10 adjusted p-value, with darker red colors indicating higher pathway enrichment. (B) KEGG pathway and (C) DisGeNET gene set enrichment results for the predicted cERs (including known and predicted novel cERs), unpredicted cERs and NGs. Terms with adjusted P-values < 0.01 are shown.