Mouse-Specific Single cell cytokine activity prediction and Estimation (MouSSE)
Fig 9
Differentially expressed cytokine markers on mouse lymph node ST data consisting of 1092 spots by infection status (i.e., MS-1, MS-2 and PBS).
(Fig 9A) Heatmap of differentially expressed cytokines for the IREA-based gene sets scored using just positive weighted genes (irea.pos). (Fig 9B) Heatmap of differentially expressed cytokines for the IREA-based positive and negative weighted gene sets scored using MouSSE’s weighting strategy (irea.mousse).