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ChIP-GSM: Inferring active transcription factor modules to predict functional regulatory elements

Fig 3

ChIP-GSM-inferred TF modules for enhancer and promoter regions respectively.

The number of modules functioning at enhancer or promoter regions in (A) MCF-7 cells or (B) K562 cells. Module abundance reveals that region-specific modules can be as strong as common modules functioning in both enhancer and promoter regions, in (C) MCF-7 cells or in (D) K562 cells.

Fig 3

doi: https://doi.org/10.1371/journal.pcbi.1009203.g003