Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling

doi:10.1371/journal.pcbi.1007219

Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling

Fig 2

Modeling with uniform σ values.

Average GDT-HA (A) and lDDT (B) scores of the AS models as a function of the uniform σ value (ranging from 0.01 to 7.0 Å) applied to their HDDRs. The horizontal dashed lines represent the average scores obtained with the original σ_MOD values.

doi: https://doi.org/10.1371/journal.pcbi.1007219.g002