Galaxy and Apollo as a biologist-friendly interface for high-quality cooperative phage genome annotation

• Jolene Ramsey ,

  Contributed equally to this work with: Jolene Ramsey, Helena Rasche

  Roles Data curation, Investigation, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

  https://orcid.org/0000-0002-3774-5896

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• Helena Rasche ,

  Contributed equally to this work with: Jolene Ramsey, Helena Rasche

  Roles Conceptualization, Data curation, Formal analysis, Methodology, Software, Supervision, Validation, Visualization, Writing – review & editing

  Current address: Erasmus Medical Center, Clinical Bioinformatics group, Department of Pathology, Rotterdam, the Netherlands.

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

  https://orcid.org/0000-0001-9760-8992

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• Cory Maughmer,

  Roles Methodology, Resources, Software, Supervision, Validation, Writing – review & editing

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

  https://orcid.org/0000-0003-0425-0544

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• Anthony Criscione,

  Roles Methodology, Software, Writing – review & editing

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

  https://orcid.org/0000-0002-3835-7625

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• Eleni Mijalis,

  Roles Methodology, Software, Validation, Writing – review & editing

  Current address: Louisiana State University, School of Medicine, Shreveport, Louisiana, United States of America.

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

  https://orcid.org/0000-0002-6500-1616

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• Mei Liu,

  Roles Data curation, Project administration, Supervision, Validation, Writing – review & editing

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

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• James C. Hu †,

  † Deceased.

  Roles Funding acquisition, Supervision

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

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• Ry Young,

  Roles Data curation, Funding acquisition, Project administration, Resources, Supervision, Validation, Writing – review & editing

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America

  https://orcid.org/0000-0001-8001-2914

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• Jason J. Gill

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Project administration, Resources, Supervision, Validation, Writing – review & editing

  * E-mail: jason.gill@tamu.edu

  Affiliations Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America, Department of Animal Science, Texas A&M University, College Station, Texas, United States of America

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