About the Authors
- Thomas Obadia
-
* E-mail: thomas.obadia@iplesp.upmc.fr (TO); pierre-yves.boelle@upmc.fr (PYB)
Affiliations Sorbonne Universités, UPMC Univ Paris 06, UMR_S 1136, Institut Pierre Louis d’Epidémiologie et de Santé Publique, F-75013, Paris, France, INSERM, UMR_S 1136, Institut Pierre Louis d’Epidémiologie et de Santé Publique, F-75013, Paris, France
- Romain Silhol
-
Affiliation Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
- Lulla Opatowski
-
Affiliations Inserm UMR 1181 “Biostatistics, Biomathematics, Pharmacoepidemiology and Infectious Diseases” (B2PHI), F-75015, Paris, France, Institut Pasteur, UMR 1181, B2PHI, F-75015, Paris, France, Univ. Versailles St Quentin, UMR 1181, B2PHI, F-78180 Montigny-le-Bretonneux
- Laura Temime
-
Affiliation Laboratoire MESuRS, Conservatoire National des Arts et Métiers, 75003, Paris, France
- Judith Legrand
-
Affiliation Univ Paris-Sud, UMR 0320/UMR8120 Génétique Quantitative et Evolution—Le Moulon, F-91190, Gif-sur-Yvette, France
- Anne C. M. Thiébaut
-
Affiliations Inserm UMR 1181 “Biostatistics, Biomathematics, Pharmacoepidemiology and Infectious Diseases” (B2PHI), F-75015, Paris, France, Institut Pasteur, UMR 1181, B2PHI, F-75015, Paris, France, Univ. Versailles St Quentin, UMR 1181, B2PHI, F-78180 Montigny-le-Bretonneux
- Jean-Louis Herrmann
-
Affiliations INSERM U1173, UFR Simone Veil, Versailles-Saint-Quentin University, 78180, Saint-Quentin en Yvelines, France, AP-HP, Hôpital Raymond Poincaré, Service de Microbiologie, F-92380, Garches, France
- Éric Fleury
-
Contributed equally to this work with: Éric Fleury, Didier Guillemot, Pierre-Yves Boëlle
Affiliations ENS de Lyon, Université de Lyon, Laboratoire de l’Informatique du Parallélisme (UMR CNRS 5668—ENS de Lyon—UCB Lyon 1), IXXI Rhône Alpes Complex Systems Institute, Lyon, France, Inria—Institut National de Recherche en Informatique et en Automatique, Montbonnet, France
- Didier Guillemot
-
Contributed equally to this work with: Éric Fleury, Didier Guillemot, Pierre-Yves Boëlle
Affiliations Inserm UMR 1181 “Biostatistics, Biomathematics, Pharmacoepidemiology and Infectious Diseases” (B2PHI), F-75015, Paris, France, Institut Pasteur, UMR 1181, B2PHI, F-75015, Paris, France, Univ. Versailles St Quentin, UMR 1181, B2PHI, F-78180 Montigny-le-Bretonneux, AP-HP, Raymond Poincare Hospital, F-92380 Garches, France
- Pierre-Yves Boëlle
-
Contributed equally to this work with: Éric Fleury, Didier Guillemot, Pierre-Yves Boëlle
* E-mail: thomas.obadia@iplesp.upmc.fr (TO); pierre-yves.boelle@upmc.fr (PYB)
Affiliations Sorbonne Universités, UPMC Univ Paris 06, UMR_S 1136, Institut Pierre Louis d’Epidémiologie et de Santé Publique, F-75013, Paris, France, INSERM, UMR_S 1136, Institut Pierre Louis d’Epidémiologie et de Santé Publique, F-75013, Paris, France, AP-HP, Hôpital Saint-Antoine, Département de Santé Publique, F-75571, Paris, France
- on behalf of the I-Bird Study Group
-
¶Membership of the I-Bird Study Group is listed in the Acknowledgments.
Competing Interests
The authors have declared that no competing interests exist.
Author Contributions
Conceived and designed the experiments: DG EF PYB JLH. Analyzed the data: TO PYB RS. Wrote the paper: TO PYB RS JL LO LT ACMT JLH EF DG.