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August 2021

In plants, nucleotide-binding domain and leucine-rich repeat (NLR)-containing proteins can form receptor networks to confer hypersensitive cell death and innate immunity. One class of NLRs, known as NLR required for cell death (NRCs), are central nodes in a complex network that protects against multiple pathogens and comprises up to half of the NLRome of solanaceous plants. Given the prevalence of this NLR network, Derevnina et al. hypothesized that pathogens convergently evolved to secrete effectors that target NRC activities. To test this, they screened a library of 165 bacterial, oomycete, nematode, and aphid effectors for their capacity to suppress the cell death response triggered by the NRC-dependent disease resistance proteins Prf and Rpi-blb2. Among the identified suppressors, the authors found that proteins from a cyst nematode and an oomycete specifically counteract a subset of NRC proteins independently of their sensor NLR partners. The researchers conclude that plant pathogens have evolved to counteract central nodes of the NRC immune receptor network through different mechanisms. The image shows Nicotiana benthamiana leaves infiltrated with Agrobacterium tumefaciens in order to transiently express genes of interest. These brightfield (top left, bottom right) and UV (top right, bottom left) images show N. benthamiana leaves expressing NLR immune receptor mutants that constitutively trigger a form of programmed cell death termed the hypersensitive response. The dead tissue accumulates high amounts of phenolic compounds that fluoresce under UV light, causing the bright green patches observed.

Image Credit: Mauricio P. Contreras

Essay

Natural experiments and long-term monitoring are critical to understand and predict marine host–microbe ecology and evolution

Matthieu Leray, Laetitia G. E. Wilkins, Amy Apprill, Holly M. Bik, Friederike Clever, Sean R. Connolly, Marina E. De León, J. Emmett Duffy, Leïla Ezzat, Sarah Gignoux-Wolfsohn, Edward Allen Herre, Jonathan Z. Kaye, David I. Kline, Jordan G. Kueneman, Melissa K. McCormick, W. Owen McMillan, Aaron O’Dea, Tiago J. Pereira, Jillian M. Petersen, Daniel F. Petticord, Mark E. Torchin, Rebecca Vega Thurber, Elin Videvall, William T. Wcislo, Benedict Yuen, Jonathan A. Eisen

Perspectives

Challenges in interpreting cytokine data in COVID-19 affect patient care and management

Stephen Y. Wang, Takehiro Takahashi, Alexander B. Pine, William E. Damsky, Michael Simonov, Yanhua Zhang, Elizabeth Kieras, Christina C. Price, Brett A. King, Mark D. Siegel, Gary V. Desir, Alfred I. Lee, Akiko Iwasaki, Hyung J. Chun

Empowering grassroots innovation to accelerate biomedical research

Bastian Greshake Tzovaras, Michael Rera, Edwin H. Wintermute, Katharina Kloppenborg, Juliette Ferry-Danini, Guy Aidelberg, Rachel Aronoff, Ariel Lindner, Dusan Misevic

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Research Articles

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Ruth Y. Oliver, Carsten Meyer, Ajay Ranipeta, Kevin Winner, Walter Jetz

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Jonathan P. Drury, Julien Clavel, Joseph A. Tobias, Jonathan Rolland, Catherine Sheard, Hélène Morlon

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Glycerol suppresses glucose consumption in trypanosomes through metabolic contest

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Plant pathogens convergently evolved to counteract redundant nodes of an NLR immune receptor network

Lida Derevnina, Mauricio P. Contreras, Hiroaki Adachi, Jessica Upson, Angel Vergara Cruces, Rongrong Xie, Jan Skłenar, Frank L. H. Menke, Sam T. Mugford, Dan MacLean, Wenbo Ma, Saskia A. Hogenhout, Aska Goverse, Abbas Maqbool, Chih-Hang Wu, Sophien Kamoun

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A unique death pathway keeps RIPK1 D325A mutant mice in check at embryonic day 10.5

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Short Reports

The Δ40p53 isoform inhibits p53-dependent eRNA transcription and enables regulation by signal-specific transcription factors during p53 activation

Cecilia B. Levandowski, Taylor Jones, Margaret Gruca, Sivapriya Ramamoorthy, Robin D. Dowell, Dylan J. Taatjes

Methods and Resources

PhyloFisher: A phylogenomic package for resolving eukaryotic relationships

Alexander K. Tice, David Žihala, Tomáš Pánek, Robert E. Jones, Eric D. Salomaki, Serafim Nenarokov, Fabien Burki, Marek Eliáš, Laura Eme, Andrew J. Roger, Antonis Rokas, Xing-Xing Shen, Jürgen F. H. Strassert, Martin Kolísko, Matthew W. Brown