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December 2015

A study by David Gallego-Ortega, Christopher Ormandy and colleagues shows that up-regulation of the transcription factor ELF5 in tumors helps to create a micro-environment that recruits the innate immune system and increases vascular permeability, leading to increased metastasis in luminal breast cancer. Together with its role in anti-estrogen resistance, this suggests that ELF5 is a major driver of a lethal phenotype. The image shows metastasis nodules in the dissected lungs of a mouse model of mammary cancer that is overexpressing ELF5. The green fluorescence (EGFP) identifies the ELF5-expressing mammary cancer cells.

Image Credit: David Gallego-Ortega and Anita Ledger

Essays

The Hologenome Concept: Helpful or Hollow?

Nancy A. Moran, Daniel B. Sloan

Exceptional Antibodies Produced by Successive Immunizations

Patricia J. Gearhart, Diana P. Castiblanco, Lisa M. Russell Knode

Unsolved Mystery

Lateral Inhibition in the Vertebrate Retina: The Case of the Missing Neurotransmitter

Richard H. Kramer, Christopher M. Davenport

Perspective

Controlled Access under Review: Improving the Governance of Genomic Data Access

Mahsa Shabani, Stephanie O. M. Dyke, Yann Joly, Pascal Borry

Community Page

SBOL Visual: A Graphical Language for Genetic Designs

Jacqueline Y. Quinn, Robert Sidney Cox III, Aaron Adler, Jacob Beal, Swapnil Bhatia, Yizhi Cai, Joanna Chen, Kevin Clancy, Michal Galdzicki, Nathan J. Hillson, Nicolas Le Novère, Akshay J. Maheshwari, James Alastair McLaughlin, Chris J. Myers, Umesh P, Matthew Pocock, Cesar Rodriguez, Larisa Soldatova, Guy-Bart V. Stan, Neil Swainston, Anil Wipat, Herbert M. Sauro

Research Articles

Five Years of Experimental Warming Increases the Biodiversity and Productivity of Phytoplankton

Gabriel Yvon-Durocher, Andrew P. Allen, Maria Cellamare, Matteo Dossena, Kevin J. Gaston, Maria Leitao, José M. Montoya, Daniel C. Reuman, Guy Woodward, Mark Trimmer

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Drosophila Avoids Parasitoids by Sensing Their Semiochemicals via a Dedicated Olfactory Circuit

Shimaa A. M. Ebrahim, Hany K. M. Dweck, Johannes Stökl, John E. Hofferberth, Federica Trona, Kerstin Weniger, Jürgen Rybak, Yoichi Seki, Marcus C. Stensmyr, Silke Sachse, Bill S. Hansson, Markus Knaden

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ShcA Protects against Epithelial–Mesenchymal Transition through Compartmentalized Inhibition of TGF-β-Induced Smad Activation

Baby Periyanayaki Muthusamy, Erine H. Budi, Yoko Katsuno, Matthew K. Lee, Susan M. Smith, Amer M. Mirza, Rosemary J. Akhurst, Rik Derynck

The Contribution of Network Organization and Integration to the Development of Cognitive Control

Scott Marek, Kai Hwang, William Foran, Michael N. Hallquist, Beatriz Luna

Bidirectional Regulation of Innate and Learned Behaviors That Rely on Frequency Discrimination by Cortical Inhibitory Neurons

Mark Aizenberg, Laetitia Mwilambwe-Tshilobo, John J. Briguglio, Ryan G. Natan, Maria N. Geffen

ELF5 Drives Lung Metastasis in Luminal Breast Cancer through Recruitment of Gr1+ CD11b+ Myeloid-Derived Suppressor Cells

David Gallego-Ortega, Anita Ledger, Daniel L. Roden, Andrew M. K. Law, Astrid Magenau, Zoya Kikhtyak, Christina Cho, Stephanie L. Allerdice, Heather J. Lee, Fatima Valdes-Mora, David Herrmann, Robert Salomon, Adelaide I. J. Young, Brian Y. Lee, C. Marcelo Sergio, Warren Kaplan, Catherine Piggin, James R. W. Conway, Brian Rabinovich, Ewan K. A. Millar, Samantha R. Oakes, Tatyana Chtanova, Alexander Swarbrick, Matthew J. Naylor, Sandra O’Toole, Andrew R. Green, Paul Timpson, Julia M. W. Gee, Ian O. Ellis, Susan J. Clark, Christopher J. Ormandy

Bromodomain Proteins Contribute to Maintenance of Bloodstream Form Stage Identity in the African Trypanosome

Danae Schulz, Monica R. Mugnier, Eda-Margaret Paulsen, Hee-Sook Kim, Chun-wa W. Chung, David F. Tough, Inmaculada Rioja, Rab K. Prinjha, F. Nina Papavasiliou, Erik W. Debler

The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome

Laurence D. Hurst, Avazeh T. Ghanbarian, Alistair R. R. Forrest, FANTOM consortium, Lukasz Huminiecki

Metformin Antagonizes Cancer Cell Proliferation by Suppressing Mitochondrial-Dependent Biosynthesis

Takla Griss, Emma E. Vincent, Robert Egnatchik, Jocelyn Chen, Eric H. Ma, Brandon Faubert, Benoit Viollet, Ralph J. DeBerardinis, Russell G. Jones

Phosphorylation of the Synaptonemal Complex Protein Zip1 Regulates the Crossover/Noncrossover Decision during Yeast Meiosis

Xiangyu Chen, Ray T. Suhandynata, Rima Sandhu, Beth Rockmill, Neeman Mohibullah, Hengyao Niu, Jason Liang, Hsiao-Chi Lo, Danny E. Miller, Huilin Zhou, G. Valentin Börner, Nancy M. Hollingsworth

Plants Encode a General siRNA Suppressor That Is Induced and Suppressed by Viruses

Nahid Shamandi, Matthias Zytnicki, Cyril Charbonnel, Emilie Elvira-Matelot, Aurore Bochnakian, Pascale Comella, Allison C. Mallory, Gersende Lepère, Julio Sáez-Vásquez, Hervé Vaucheret

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