Transcriptional outcomes and kinetic patterning of gene expression in response to NF-κB activation

Mingming Zhao; Jaimy Joy; Weiqiang Zhou; Supriyo De; William H. Wood III; Kevin G. Becker; Hongkai Ji; Ranjan Sen

doi:10.1371/journal.pbio.2006347

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Open Access

Peer-reviewed

Research Article

Transcriptional outcomes and kinetic patterning of gene expression in response to NF-κB activation

Mingming Zhao,

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Validation, Visualization, Writing – review & editing

Affiliation Gene Regulation Section, Laboratory of Molecular Biology and Immunology, National Institute on Aging, Baltimore, Maryland, United States of America

http://orcid.org/0000-0002-9821-6373

⨯
Jaimy Joy,

Roles Formal analysis, Writing – review & editing

Affiliation Gene Regulation Section, Laboratory of Molecular Biology and Immunology, National Institute on Aging, Baltimore, Maryland, United States of America
⨯
Weiqiang Zhou,

Roles Data curation, Methodology, Software, Validation, Visualization, Writing – review & editing

Affiliation Department of Biostatistics, Johns Hopkins University Bloomberg School of Public Health, Baltimore, Maryland, United States of America
⨯
Supriyo De,

Roles Data curation, Methodology, Software

Affiliation Gene Expression and Genomics Unit, Laboratory of Genetics and Genomics, National Institute on Aging, Baltimore, Maryland, United States of America
⨯
William H. Wood III,

Roles Methodology, Validation

Affiliation Gene Expression and Genomics Unit, Laboratory of Genetics and Genomics, National Institute on Aging, Baltimore, Maryland, United States of America
⨯
Kevin G. Becker,

Roles Funding acquisition, Investigation, Validation, Writing – review & editing

Affiliation Gene Expression and Genomics Unit, Laboratory of Genetics and Genomics, National Institute on Aging, Baltimore, Maryland, United States of America
⨯
Hongkai Ji,

Roles Investigation, Methodology, Software, Supervision, Validation, Writing – review & editing

Affiliation Department of Biostatistics, Johns Hopkins University Bloomberg School of Public Health, Baltimore, Maryland, United States of America
⨯
Ranjan Sen

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Resources, Supervision, Validation, Writing – original draft, Writing – review & editing

* E-mail: senranja@grc.nia.nih.gov

Affiliation Gene Regulation Section, Laboratory of Molecular Biology and Immunology, National Institute on Aging, Baltimore, Maryland, United States of America
⨯

Transcriptional outcomes and kinetic patterning of gene expression in response to NF-κB activation

Mingming Zhao,
Jaimy Joy,
Weiqiang Zhou,
Supriyo De,
William H. Wood III,
Kevin G. Becker,
Hongkai Ji,
Ranjan Sen

Published: September 10, 2018
https://doi.org/10.1371/journal.pbio.2006347

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Transcription factors
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DNA transcription
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Gene expression
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RNA sequencing
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Gene cloning
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ChIA PET
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Gene regulation
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k means clustering
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