Viral and immune dynamics of genital human papillomavirus infections in young women with high temporal resolution

• Nicolas Tessandier ,

  Contributed equally to this work with: Nicolas Tessandier, Baptiste Elie

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: nicolas.tessandier@ird.fr (NT); baptiste.elie@ens-paris-scaly.fr (BE); samuel.alizon@cnrs.fr (SA)

  Affiliations CIRB, CNRS, INSERM, Collège de France, Université PSL, Paris, France, MIVEGEC, CNRS, IRD, Université de Montpellier, France

  https://orcid.org/0000-0002-7486-3445

  ⨯
• Baptiste Elie ,

  Contributed equally to this work with: Nicolas Tessandier, Baptiste Elie

  Roles Data curation, Formal analysis, Methodology, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: nicolas.tessandier@ird.fr (NT); baptiste.elie@ens-paris-scaly.fr (BE); samuel.alizon@cnrs.fr (SA)

  Affiliations CIRB, CNRS, INSERM, Collège de France, Université PSL, Paris, France, MIVEGEC, CNRS, IRD, Université de Montpellier, France

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• Vanina Boué,

  Roles Investigation, Methodology

  Affiliation MIVEGEC, CNRS, IRD, Université de Montpellier, France

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• Christian Selinger,

  Roles Data curation, Methodology

  Affiliations MIVEGEC, CNRS, IRD, Université de Montpellier, France, Swiss Tropical and Public Health Institute, Basel, Switzerland

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• Massilva Rahmoun,

  Roles Investigation, Methodology

  Affiliation MIVEGEC, CNRS, IRD, Université de Montpellier, France

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• Claire Bernat,

  Roles Investigation, Methodology

  Affiliations MIVEGEC, CNRS, IRD, Université de Montpellier, France, CNRS UMR 5203, Institut de Génomique Fonctionnelle, Montpellier, France

  ⨯
• Sophie Grasset,

  Roles Investigation

  Affiliation MIVEGEC, CNRS, IRD, Université de Montpellier, France

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• Soraya Groc,

  Roles Investigation, Methodology

  Affiliations MIVEGEC, CNRS, IRD, Université de Montpellier, France, PCCEI, Univ. Montpellier, Inserm, EFS, Montpellier, France

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• Anne-Sophie Bedin,

  Roles Methodology

  Affiliation PCCEI, Univ. Montpellier, Inserm, EFS, Montpellier, France

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• Thomas Beneteau,

  Roles Data curation, Methodology

  Affiliation MIVEGEC, CNRS, IRD, Université de Montpellier, France

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• Marine Bonneau,

  Roles Investigation, Methodology

  Affiliation Department of Obstetrics and Gynaecology, Centre Hospitalier Universitaire de Montpellier, Montpellier, France

  ⨯
• Christelle Graf,

  Roles Investigation, Methodology

  Affiliation Department of Obstetrics and Gynaecology, Centre Hospitalier Universitaire de Montpellier, Montpellier, France

  ⨯
• Nathalie Jacobs,

  Roles Methodology, Validation

  Affiliation Laboratory of Cellular and Molecular Immunology, GIGA Institute, University of Liège, Liège, Belgium

  ⨯
• Tsukushi Kamiya,

  Roles Data curation, Methodology

  Affiliation CIRB, CNRS, INSERM, Collège de France, Université PSL, Paris, France

  ⨯
• Marion Kerioui,

  Roles Methodology

  Affiliation IAME, INSERM, Université de Paris, Paris, France

  ⨯
• Julie Lajoie,

  Roles Methodology

  Affiliation Department of Medical Microbiology, University of Manitoba, Winnipeg, Canada

  ⨯
• Imène Melki,

  Roles Methodology, Validation

  Affiliation CIRB, CNRS, INSERM, Collège de France, Université PSL, Paris, France

  ⨯
• Jean-Luc Prétet,

  Roles Methodology, Resources

  Affiliations Université de Franche-Comté, CNRS, Chrono-environnement, Besançon, France, Centre National de Référence Papillomavirus, CHRU de Besançon, France

  ⨯
• Bastien Reyné,

  Roles Data curation, Methodology, Writing – review & editing

  Affiliation MIVEGEC, CNRS, IRD, Université de Montpellier, France

  ⨯
• Géraldine Schlecht-Louf,

  Roles Methodology, Validation, Writing – review & editing

  Affiliation UMR996, Inflammation, Chemokines and Immunopathology, INSERM, Université Paris-Saclay, Orsay, France

  ⨯
• Mircea T. Sofonea,

  Roles Methodology, Writing – review & editing

  Affiliations PCCEI, Univ. Montpellier, Inserm, EFS, Montpellier, France, CHU de Nîmes, Nîmes, France

  ⨯
• Olivier Supplisson,

  Roles Methodology, Writing – review & editing

  Affiliations CIRB, CNRS, INSERM, Collège de France, Université PSL, Paris, France, Sorbonne Université, France

  ⨯
• Chris Wymant,

  Roles Methodology, Writing – review & editing

  Affiliation Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom

  ⨯
• Vincent Foulongne,

  Roles Methodology, Resources

  Affiliation PCCEI, Univ. Montpellier, Inserm, EFS, Montpellier, France

  ⨯
• Jérémie Guedj,

  Roles Methodology, Validation

  Affiliation IAME, INSERM, Université de Paris, Paris, France

  ⨯
• Christophe Hirtz,

  Roles Investigation, Methodology, Resources

  Affiliation RMB-PPC, INM, Univ Montpellier, CHU Montpellier, INSERM CNRS, Montpellier, France

  ⨯
• Marie-Christine Picot,

  Roles Data curation, Methodology, Resources

  Affiliation Department of Medical Information (DIM), Centre Hospitalier Universitaire de Montpellier, Montpellier, France

  ⨯
• Jacques Reynes,

  Roles Investigation, Methodology

  Affiliation Department of Infectious and Tropical Diseases, Centre Hospitalier Universitaire de Montpellier, Montpellier, France

  ⨯
• Vincent Tribout,

  Roles Investigation, Methodology, Resources

  Affiliation Center for Free Information, Screening and Diagnosis (CeGIDD), Centre Hospitalier Universitaire de Montpellier, Montpellier, France

  ⨯
• Édouard Tuaillon,

  Roles Methodology, Resources

  Affiliation PCCEI, Univ. Montpellier, Inserm, EFS, Montpellier, France

  ⨯
• Tim Waterboer,

  Roles Investigation, Methodology, Resources

  Affiliation German Cancer Research Center (DKFZ), Infections and Cancer Epidemiology, Heidelberg, Germany

  ⨯
• Michel Segondy,

  Roles Conceptualization, Investigation, Methodology, Resources

  Affiliation PCCEI, Univ. Montpellier, Inserm, EFS, Montpellier, France

  ⨯
• Ignacio G. Bravo,

  Roles Conceptualization, Methodology, Writing – review & editing

  Affiliation MIVEGEC, CNRS, IRD, Université de Montpellier, France

  ⨯
• Nathalie Boulle,

  Roles Conceptualization, Investigation, Methodology, Resources

  Affiliation PCCEI, Univ. Montpellier, Inserm, EFS, Montpellier, France

  ⨯
• Carmen Lía Murall,

  Roles Conceptualization, Data curation, Funding acquisition, Methodology, Writing – review & editing

  Affiliations MIVEGEC, CNRS, IRD, Université de Montpellier, France, National Microbiology Laboratory (NML), Public Health Agency of Canada (PHAC), Canada

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•  [ ... ],
• Samuel Alizon

  Roles Conceptualization, Data curation, Funding acquisition, Methodology, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: nicolas.tessandier@ird.fr (NT); baptiste.elie@ens-paris-scaly.fr (BE); samuel.alizon@cnrs.fr (SA)

  Affiliations CIRB, CNRS, INSERM, Collège de France, Université PSL, Paris, France, MIVEGEC, CNRS, IRD, Université de Montpellier, France

  https://orcid.org/0000-0002-0779-9543

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