Citation: Holder AA (2009) Malaria Vaccines: Where Next? PLoS Pathog 5(10): e1000638. https://doi.org/10.1371/journal.ppat.1000638
Editor: Glenn F. Rall, The Fox Chase Cancer Center, United States of America
Published: October 30, 2009
Copyright: © 2009 Anthony A. Holder. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Funding: Work in the author's laboratory is funded by the UK MRC, the Wellcome Trust, The European Union and the National Institutes of Health. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Competing interests: The author has declared that no competing interests exist.
A malaria vaccine for mass immunization, which could be delivered cheaply and widely and provide long lasting protection, would have a massive effect on global public health. However, such a vaccine does not currently exist. The reduction in global malaria incidence, in part due to the ongoing introduction of mosquito control measures such as insecticide-treated nets and disease treatment with artemesinin combination drug therapy, raises the performance requirements for a future vaccine, since the cost may be high relative to that of other interventions and the scale of the disease burden. Nevertheless, history teaches that complacency and an over-reliance on a small number of tools to combat this disease are dangerous. There is therefore still a pressing need for a vaccine to complement other control and potential elimination tools. The big question is whether or not a malaria vaccine that fulfills the above criteria can be developed.
RTS,S, the first malaria vaccine that targets the so-called pre-erythrocytic stages in humans, has just started in Phase 3 trials ; this is a major achievement based on numerous trials (most recent trials in ,) and 40 years of research (reviewed in ). Although questions persist about whether this vaccine will be effective enough  and about the nature of the protective mechanisms, does this achievement signal the end for research on new vaccines and the basic parasite biology and host immunology that underpins vaccine research? Other malaria vaccine candidates that target the asexual blood stages are not so advanced, and without improvement may not live up to hopes and expectations ,; is it therefore time to reassess the strategy on which they were developed ? For example, instead of subunit or vectored vaccines, the potential use of live or live and attenuated parasite vaccines has been proposed , and is being pursued (http://www.sanaria.com/). Now that the international community is striving to eliminate malaria, maybe the requirements for a malaria vaccine are changing. Perhaps now is the time for a greater effort to research and develop the next generation of malaria vaccines. If this is the time for reinvigoration, what more do we need to know to develop malaria vaccines?
Current vaccines are based on a handful of proteins, several of which were first described several decades ago and before analysis of the Plasmodium falciparum genome indicated that there are about 5,400 protein-coding genes, some of which are expressed in an exquisitely stage-specific manner and others that are not. Are any of these other proteins antigens that are worth considering for vaccine development? It is unlikely that the level of resources devoted to the circumsporozoite surface protein (CSP) development that led to RTS,S could be mustered to support the further development of any new antigen. If all new malaria vaccines need to be compared against RTS,S, this could only be done in an expensive clinical trial format since alternative assays of efficacy do not exist. The cost and practicalities of this may inhibit vaccine-related research and the development of next generation vaccines, because a company or public–private partnership may not be prepared to put in the resources to produce a new vaccine. We must, therefore, ask where limited resources are best placed; vaccine discovery and development are both expensive. We have to take rational approaches; it's the best we can do, and resources are not available for purely empirical approaches. We need to enhance efforts on basic science in combination with clinical studies to provide a strong rationale for further vaccine development. This will need to be an integrated rather than a compartmentalized approach; vaccine development from antigen discovery to clinical trial is not a linear process. For example, clinical samples collected as part of a vaccine evaluation trial are essential for the development of better and more appropriate methods and assays to understand relevant human immune responses.
Naturally Acquired Immunity—Do We Need to Do Better with a Vaccine?
The malaria parasite has co-evolved with its host over tens of thousands of years, so it is no surprise that it has a variety of mechanisms to evade the host immune response. P. falciparum also has a complex life cycle, and even now we are discovering new aspects of its biology. For a malaria vaccine, the big strategic questions remain: which stage or stages of the life cycle do we want to target, what are the targets, and how do we deliver them? Can a malaria vaccine mature the immune system from that of a naïve individual to that of an individual protected from death and disease? Can we do better than what is achieved in naturally acquired immunity? An increased focus on elimination of malaria has led to the suggestion that a transmission-blocking vaccine, either targeting sexual stages alone or sexual- and pre-erythrocytic stages, is all we will need in the future; this is optimistic because of the apparent lack of naturally acquired immunity to these stages and the potential lack of benefit to the individual vaccinee.
With time and exposure, individuals that survive a malaria infection develop immunity to the disease. The acquisition of immunity that protects against death and severe disease precedes that which protects against mild malaria . Sterile immunity may never be achieved, which may not have consequences for the individual, but it is important for preventing transmission and eventually eliminating the parasite. Different strategies targeting different stages of the life cycle and the use of attenuated parasites or mixtures of several or single antigens in a variety of live, attenuated vector- or adjuvant-based delivery systems are all being investigated. This is the basis upon which the development of a malaria vaccine rests. Since in holoendemic areas it is young children rather than adults who are particularly at risk, we need a better understanding of the maturation of the immune system with age. This, together with immunological memory, is one area for immunologists to make significant contributions to the malaria field .
Different Facets of Immunity
Effective protection involves both cellular and humoral immunity, with antibody being important in targeting free parasites and the blood stages, and a cellular response probably most important against pre-erythrocytic stages. However, the targets and the mechanisms still need further elucidation. Studies of immunity induced by experimental infection of humans will provide considerable insight into mechanisms of immunity and their targets . The antigens are many and varied and most remain to be characterised. Some proteins undergo antigenic variation, others are highly polymorphic, and some are conserved in sequence. Antigenic variation has been described largely in the context of proteins on the infected red cell surface , but is also a feature of merozoite proteins involved in invasion and coded by small gene families . Extensive sequence polymorphism is a feature of merozoite proteins such as merozoite surface protein 2 (MSP2)  and apical membrane antigen (AMA)1 , whereas parts of MSP1 seem to be highly conserved and yet also the target of protective antibodies . We still don't know for certain whether immunity requires accumulation of responses to different forms of variant or diverse antigens, additive responses to a number of antigens , or the right response against a single antigen (for example, in terms of fine specificity, avidity, concentration, and class of antibody) . If antigenic diversity is the primary driver of immune evasion, it may never be possible to develop a sufficiently complex vaccine. Whatever the delivery system used, the repertoire of antigens will be limited, so perhaps we need to focus on first establishing the feasibility of vaccination against a heterogeneous population of parasites. Using massively parallel sequencing technologies to survey the genome and transcriptome of wild parasites, and methods to measure the specificity and level of immune responses to many individual antigens  in single individuals of well-defined clinical status, together with informatics tools to analyse the data , will provide insights into this issue.
A Focus on Merozoites
It has been proposed that acquisition of immunity to strain-transcending epitopes is a feature of natural infection . If antigenic variation is therefore not of major significance in acquisition of immunity, then proteins on the surface of the infected red cell such as EMP1, rifins, and stevors may have little importance as vaccine candidates for the asexual blood stages. The focus is placed on the merozoite, in particular on proteins that are exposed to antibodies such as those on the surface, in the micronemes/rhoptries, and in the parasitophorous vacuole, including shed and soluble proteins. The duration of a protein's accessibility to antibody is an important criterion and may explain why the parasite sheds all or most of its surface proteins at invasion. Removal of immune complexes from the parasite surface will reduce susceptibility to Fc-mediated effector functions.
Most vaccines currently in or approaching clinical testing are based on antigens that were first described almost 30 years ago. It was first shown in 1981 that immunisation with a single protein (MSP1) protected against challenge infection in a rodent malaria model . The genome/transcriptome/proteome projects of the last 10 years have identified the spectrum of proteins at different stages of the life cycle in which there are likely to be many potential new candidates that need to be evaluated . Criteria or guidelines to assist in the prioritisation of antigens have been developed (see, for example, http://www.emvi.org/Portfolio/EC+Funded+Projects/EURHAVAC). Such guidelines can be obvious (but not always followed), for example, if it is proposed that a particular antigen is the target of antibodies it must be accessible at the appropriate time in the life cycle. We must accelerate the movement of ideas from basic science to the first step of potential development: funding for this has often been limited because it falls into the gap between basic and applied science.
Clearly, any strategy for vaccine development will need to focus equally on the delivery system to induce the right sort and level of response and the antigens to ensure that the response is effective. There is growing interest in immunisation by using live and attenuated parasites –. Provided that the practical issues of delivery and regulatory and ethical issues of safety can be overcome, then genetic modification of the parasite could provide immense benefit; for example, developing an in vitro system for sporozoite replication, developing a parasite expressing critical antigens normally expressed at other stages such as expressing the sexual stage antigen Pfs25 on the sporozoite surface, or using genetic inactivation techniques . Parasites that have lost the ability to regulate var gene expression  or blood stage parasites attenuated by metabolic mutants  are potential vaccine candidates. Even if using parasites is a feasible approach, it still needs to be established that a single vaccine strain has the potential to deliver the diversity of sequence necessary if antigen diversity/variation is important.
The Need for Good Assays
There are too few resources to follow an entirely empirical approach to vaccine discovery and development. Therefore, there needs to be a focus on the development of assays that may be predictive of protection in humans. In the absence of a vaccine that works through a known mechanism, there is no gold standard to establish and calibrate in vitro (or in vivo) assays that are predictive of a protective immune response. A conundrum is, how is it possible to do comparative studies of different vaccines with assays that are not validated? Recent developments in transgenic host and transgenic parasite technology , represent an important achievement that may help out here, but may also yield some surprises. For example, studies using Plasmodium berghei expressing P. falciparum CSP suggest that CSP is not important in immunity provided by immunisation with attenuated sporozoites . This is a surprising finding since the leading malaria vaccine candidate, RTS,S, is comprised of part of CSP in a virus-like particle and a strong adjuvant. In other studies, a role for antibody Fc-dependent mechanisms has been highlighted using passive immunization with human antibody of mice that are transgenic for human Fc receptors and challenged with a P. berghei that is transgenic for part of P. falciparum MSP1 . However, as with other assays, the relevance to humans still needs to be established.
The priorities are to ascertain the basis of protection against malaria and develop delivery systems to elicit the right immunological response and memory. These delivery systems may be attenuated parasites, vectored vaccines, or adjuvant and subunit protein-based. No doubt new and better antigens will be identified and prioritised, and combinations will need to be tested, with different targets and effector mechanisms at different stages of the life cycle. All of this will need to be underpinned by basic biological studies.
- 1. PATH Malaria Vaccine Initiative (27 May 2009) Phase 3 malaria vaccine trial begins—final testing of RTS,S [press release].PATH Malaria Vaccine Initiative27 May 2009Phase 3 malaria vaccine trial begins—final testing of RTS,S [press release].Available: http://www.malariavaccine.org/RTSSPhase3_05-27-2009.php. Accessed 7 October 2009. Available: http://www.malariavaccine.org/RTSSPhase3_05-27-2009.php. Accessed 7 October 2009.
- 2. Abdulla S, Oberholzer R, Juma O, Kubhoja S, Machera F, et al. (2008) Safety and immunogenicity of RTS,S/AS02D malaria vaccine in infants. N Engl J Med 359: 2533–2544.S. AbdullaR. OberholzerO. JumaS. KubhojaF. Machera2008Safety and immunogenicity of RTS,S/AS02D malaria vaccine in infants.N Engl J Med35925332544
- 3. Bejon P, Lusingu J, Olotu A, Leach A, Lievens M, et al. (2008) Efficacy of RTS,S/AS01E vaccine against malaria in children 5 to 17 months of age. N Engl J Med 359: 2521–2532.P. BejonJ. LusinguA. OlotuA. LeachM. Lievens2008Efficacy of RTS,S/AS01E vaccine against malaria in children 5 to 17 months of age.N Engl J Med35925212532
- 4. Vanderberg JP (2009) Reflections on early malaria vaccine studies, the first successful human malaria vaccination, and beyond. Vaccine 27: 2–9.JP Vanderberg2009Reflections on early malaria vaccine studies, the first successful human malaria vaccination, and beyond.Vaccine2729
- 5. Good MF (2009) The hope but challenge for developing a vaccine that might control malaria. Eur J Immunol 39: 939–943.MF Good2009The hope but challenge for developing a vaccine that might control malaria.Eur J Immunol39939943
- 6. Sagara I, Dicko A, Ellis RD, Fay MP, Diawara SI, et al. (2009) A randomized controlled phase 2 trial of the blood stage AMA1-C1/Alhydrogel malaria vaccine in children in Mali. Vaccine 27: 3090–3098.I. SagaraA. DickoRD EllisMP FaySI Diawara2009A randomized controlled phase 2 trial of the blood stage AMA1-C1/Alhydrogel malaria vaccine in children in Mali.Vaccine2730903098
- 7. Ogutu BR, Apollo OJ, McKinney D, Okoth W, Siangla J, et al. (2009) Blood stage malaria vaccine eliciting high antigen-specific antibody concentrations confers no protection to young children in Western Kenya. PLoS ONE 4: e4708.BR OgutuOJ ApolloD. McKinneyW. OkothJ. Siangla2009Blood stage malaria vaccine eliciting high antigen-specific antibody concentrations confers no protection to young children in Western Kenya.PLoS ONE4e4708
- 8. Wykes M, Good MF (2007) A case for whole-parasite malaria vaccines. Int J Parasitol 37: 705–712.M. WykesMF Good2007A case for whole-parasite malaria vaccines.Int J Parasitol37705712
- 9. Luke TC, Hoffman SL (2003) Rationale and plans for developing a non-replicating, metabolically active, radiation-attenuated Plasmodium falciparum sporozoite vaccine. J Exp Biol 206: 3803–3808.TC LukeSL Hoffman2003Rationale and plans for developing a non-replicating, metabolically active, radiation-attenuated Plasmodium falciparum sporozoite vaccine.J Exp Biol20638033808
- 10. Pinzon-Charry A, Good MF (2008) Malaria vaccines: the case for a whole-organism approach. Expert Opin Biol Ther 8: 441–448.A. Pinzon-CharryMF Good2008Malaria vaccines: the case for a whole-organism approach.Expert Opin Biol Ther8441448
- 11. Doolan DL, Dobano C, Baird JK (2009) Acquired immunity to malaria. Clin Microbiol Rev 22: 13–36.DL DoolanC. DobanoJK Baird2009Acquired immunity to malaria.Clin Microbiol Rev221336
- 12. Pierce SK, Miller LH (2009) World Malaria Day 2009: what malaria knows about the immune system that immunologists still do not. J Immunol 182: 5171–5177.SK PierceLH Miller2009World Malaria Day 2009: what malaria knows about the immune system that immunologists still do not.J Immunol18251715177
- 13. Roestenberg M, McCall M, Hopman J, Wiersma J, Luty AJ, et al. (2009) Protection against a malaria challenge by sporozoite inoculation. N Engl J Med 361: 468–477.M. RoestenbergM. McCallJ. HopmanJ. WiersmaAJ Luty2009Protection against a malaria challenge by sporozoite inoculation.N Engl J Med361468477
- 14. Scherf A, Lopez-Rubio JJ, Riviere L (2008) Antigenic variation in Plasmodium falciparum. Annu Rev Microbiol 62: 445–470.A. ScherfJJ Lopez-RubioL. Riviere2008Antigenic variation in Plasmodium falciparum.Annu Rev Microbiol62445470
- 15. Cortes A, Carret C, Kaneko O, Lim BY, Ivens A, et al. (2007) Epigenetic Silencing of Plasmodium falciparum Genes Linked to Erythrocyte Invasion. PLoS Pathog 3: e107.A. CortesC. CarretO. KanekoBY LimA. Ivens2007Epigenetic Silencing of Plasmodium falciparum Genes Linked to Erythrocyte Invasion.PLoS Pathog3e107
- 16. Cortes A, Mellombo M, Benet A, Lorry K, Rare L, et al. (2004) Plasmodium falciparum: distribution of msp2 genotypes among symptomatic and asymptomatic individuals from the Wosera region of Papua New Guinea. Exp Parasitol 106: 22–29.A. CortesM. MellomboA. BenetK. LorryL. Rare2004Plasmodium falciparum: distribution of msp2 genotypes among symptomatic and asymptomatic individuals from the Wosera region of Papua New Guinea.Exp Parasitol1062229
- 17. Remarque EJ, Faber BW, Kocken CH, Thomas AW (2008) A diversity-covering approach to immunization with Plasmodium falciparum apical membrane antigen 1 induces broader allelic recognition and growth inhibition responses in rabbits. Infect Immun 76: 2660–2670.EJ RemarqueBW FaberCH KockenAW Thomas2008A diversity-covering approach to immunization with Plasmodium falciparum apical membrane antigen 1 induces broader allelic recognition and growth inhibition responses in rabbits.Infect Immun7626602670
- 18. Holder AA (2009) The carboxy-terminus of merozoite surface protein 1: structure, specific antibodies and immunity to malaria. Parasitology 136: 1445–1456.AA Holder2009The carboxy-terminus of merozoite surface protein 1: structure, specific antibodies and immunity to malaria.Parasitology13614451456
- 19. Osier FH, Fegan G, Polley SD, Murungi L, Verra F, et al. (2008) Breadth and magnitude of antibody responses to multiple Plasmodium falciparum merozoite antigens are associated with protection from clinical malaria. Infect Immun 76: 2240–2248.FH OsierG. FeganSD PolleyL. MurungiF. Verra2008Breadth and magnitude of antibody responses to multiple Plasmodium falciparum merozoite antigens are associated with protection from clinical malaria.Infect Immun7622402248
- 20. Doolan DL, Mu Y, Unal B, Sundaresh S, Hirst S, et al. (2008) Profiling humoral immune responses to P. falciparum infection with protein microarrays. Proteomics 8: 4680–4694.DL DoolanY. MuB. UnalS. SundareshS. Hirst2008Profiling humoral immune responses to P. falciparum infection with protein microarrays.Proteomics846804694
- 21. Rojas-Galeano S, Hsieh E, Agranoff D, Krishna S, Fernandez-Reyes D (2008) Estimation of relevant variables on high-dimensional biological patterns using iterated weighted kernel functions. PLoS ONE 3: e1806.S. Rojas-GaleanoE. HsiehD. AgranoffS. KrishnaD. Fernandez-Reyes2008Estimation of relevant variables on high-dimensional biological patterns using iterated weighted kernel functions.PLoS ONE3e1806
- 22. Holder AA, Freeman RR (1981) Immunization against blood-stage rodent malaria using purified parasite antigens. Nature 294: 361–364.AA HolderRR Freeman1981Immunization against blood-stage rodent malaria using purified parasite antigens.Nature294361364
- 23. Coppel RL (2009) Vaccinating with the genome: a Sisyphean task? Trends Parasitol 25: 205–212.RL Coppel2009Vaccinating with the genome: a Sisyphean task?Trends Parasitol25205212
- 24. Mueller AK, Labaied M, Kappe SH, Matuschewski K (2005) Genetically modified Plasmodium parasites as a protective experimental malaria vaccine. Nature 433: 164–167.AK MuellerM. LabaiedSH KappeK. Matuschewski2005Genetically modified Plasmodium parasites as a protective experimental malaria vaccine.Nature433164167
- 25. van Schaijk BC, Janse CJ, van Gemert GJ, van Dijk MR, Gego A, et al. (2008) Gene disruption of Plasmodium falciparum p52 results in attenuation of malaria liver stage development in cultured primary human hepatocytes. PLoS ONE 3: e3549.BC van SchaijkCJ JanseGJ van GemertMR van DijkA. Gego2008Gene disruption of Plasmodium falciparum p52 results in attenuation of malaria liver stage development in cultured primary human hepatocytes.PLoS ONE3e3549
- 26. Ting LM, Gissot M, Coppi A, Sinnis P, Kim K (2008) Attenuated Plasmodium yoelii lacking purine nucleoside phosphorylase confer protective immunity. Nat Med 14: 954–958.LM TingM. GissotA. CoppiP. SinnisK. Kim2008Attenuated Plasmodium yoelii lacking purine nucleoside phosphorylase confer protective immunity.Nat Med14954958
- 27. Combe A, Giovannini D, Carvalho TG, Spath S, Boisson B, et al. (2009) Clonal conditional mutagenesis in malaria parasites. Cell Host Microbe 5: 386–396.A. CombeD. GiovanniniTG CarvalhoS. SpathB. Boisson2009Clonal conditional mutagenesis in malaria parasites.Cell Host Microbe5386396
- 28. Tonkin CJ, Carret CK, Duraisingh MT, Voss TS, Ralph SA, et al. (2009) Sir2 paralogues cooperate to regulate virulence genes and antigenic variation in Plasmodium falciparum. PLoS Biol 7: e84.CJ TonkinCK CarretMT DuraisinghTS VossSA Ralph2009Sir2 paralogues cooperate to regulate virulence genes and antigenic variation in Plasmodium falciparum.PLoS Biol7e84
- 29. de Koning-Ward TF, O'Donnell RA, Drew DR, Thomson R, Speed TP, et al. (2003) A new rodent model to assess blood stage immunity to the Plasmodium falciparum antigen merozoite surface protein 119 reveals a protective role for invasion inhibitory antibodies. J Exp Med 198: 869–875.TF de Koning-WardRA O'DonnellDR DrewR. ThomsonTP Speed2003A new rodent model to assess blood stage immunity to the Plasmodium falciparum antigen merozoite surface protein 119 reveals a protective role for invasion inhibitory antibodies.J Exp Med198869875
- 30. Tewari R, Spaccapelo R, Bistoni F, Holder AA, Crisanti A (2002) Function of region I and II adhesive motifs of Plasmodium falciparum circumsporozoite protein in sporozoite motility and infectivity. J Biol Chem 277: 47613–47618.R. TewariR. SpaccapeloF. BistoniAA HolderA. Crisanti2002Function of region I and II adhesive motifs of Plasmodium falciparum circumsporozoite protein in sporozoite motility and infectivity.J Biol Chem2774761347618
- 31. Gruner AC, Mauduit M, Tewari R, Romero JF, Depinay N, et al. (2007) Sterile protection against malaria is independent of immune responses to the circumsporozoite protein. PLoS ONE 2: e1371.AC GrunerM. MauduitR. TewariJF RomeroN. Depinay2007Sterile protection against malaria is independent of immune responses to the circumsporozoite protein.PLoS ONE2e1371
- 32. McIntosh RS, Shi J, Jennings RM, Chappel JC, de Koning-Ward TF, et al. (2007) The importance of human FcgammaRI in mediating protection to malaria. PLoS Pathog 3: e72.RS McIntoshJ. ShiRM JenningsJC ChappelTF de Koning-Ward2007The importance of human FcgammaRI in mediating protection to malaria.PLoS Pathog3e72