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Genome Analyses of an Aggressive and Invasive Lineage of the Irish Potato Famine Pathogen

Figure 6

Distribution of single nucleotide polymorphisms (SNPs) along the coding sequence (CDS) of RXLR effector genes in P. infestans 13_A2 isolate 06_3928A.

(A) Summary of nonsynonymous and synonymous SNPs in CDSs (all genes, core orthologs and RXLRs) of 06_3928A compared to T30-4 reference genome strain. Core orthologs as genes showing orthologous sequences 1∶1∶1 in P. infestans: P. ramorum: P. sojae genomes respectively [23]. (B) Distribution of the number of synonymous and non-synonymous SNPs in the N-terminal and C-terminal domain of RXLR effector genes in 06_3928A isolate. Box and whisker plots show median, first and third quartile, and first values beyond 1.5 times the interquartile range.

Figure 6