A c-type lysozyme (named as MgCLYZ) gene was cloned from the mussel Mytilus galloprovincialis. Blast analysis indicated that MgCLYZ was a salivary c-type lysozyme which was mainly found in insects. The nucleotide sequence of MgCLYZ was predicted to encode a polypeptide of 154 amino acid residues with the signal peptide comprising the first 24 residues. The deduced mature peptide of MgCLYZ was of a calculated molecular weight of 14.4 kD and a theoretical isoelectric point (pI) of 8.08. Evolution analysis suggested that bivalve branch of the invertebrate c-type lysozymes phylogeny tree underwent positive selection during evolution. By quantitative real-time RT-PCR (qRT-PCR) analysis, MgCLYZ transcript was widely detected in all examined tissues and responded sensitively to bacterial challenge in hemocytes and hepatopancreas. The optimal temperature and pH of recombinant MgCLYZ (rMgCLYZ) were 20°C and 4, respectively. The rMgCLYZ displayed lytic activities against Gram-positive bacteria including Micrococcus luteus and Staphyloccocus aureus, and Gram-negative bacteria including Vibrio anguillarum, Enterobacter cloacae, Pseudomonas putida, Proteus mirabilis and Bacillus aquimaris. These results suggest that MgCLYZ perhaps play an important role in innate immunity of M. galloprovincialis, and invertebrate c-type lysozymes might be under positive selection in a species-specific manner during evolution for undergoing adaptation to different environment and diverse pathogens.
Citation: Wang Q, Wang C, Mu C, Wu H, Zhang L, et al. (2013) A Novel C-Type Lysozyme from Mytilus galloprovincialis: Insight into Innate Immunity and Molecular Evolution of Invertebrate C-Type Lysozymes. PLoS ONE 8(6): e67469. doi:10.1371/journal.pone.0067469
Editor: Helene F. Rosenberg, NIAID, United States of America
Received: December 5, 2012; Accepted: May 18, 2013; Published: June 20, 2013
Copyright: © 2013 Wang et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Funding: This work was supported by grant from NSFC (31172388), the 100 Talents Program of the Chinese Academy of Sciences and the Department of Science and Technology of Yantai City (2011067). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Competing interests: The authors have declared that no competing interests exist.
Invertebrates, which lack acquired immunity, are exclusively dependent on innate immunity . Like other invertebrates, the innate immunity of bivalves consists of both cellular and humoral defenses . The former includes phagocytosis or encapsulation of pathogens, with subsequent pathogen destruction via enzyme activity and oxygen metabolite release, while the latter includes various reactions mediated by series of molecules such as antimicrobial peptides and proteins , . Among the large number of inducible antimicrobial molecules, lysozyme is one of the most ubiquitous antibacterial factors and is widely distributed in invertebrate animals , .
Lysozymes (EC 22.214.171.124) are enzymes that cleave β-1,4 glycosidic bond of peptidoglycan in bacterial cell wall, and have been identified in different organisms including animals, plants and bacteriophages . Lysozymes identified in animals are generally classified into three types: chicken-type (c-type), goose-type (g-type) and invertebrate-type (i-type) . It has been demonstrated that c-type lysozymes are widely found in vertebrates (mammals, birds, reptiles, fish) and in some invertebrates (insects, crustaceans) .
Invertebrate c-type lysozymes are predominately identified in Arthropoda, and numerous studies on c-type lysozymes have been reported in insects and crustaceans . It has been demonstrated that invertebrate c-type lysozymes function mainly in innate immunity against the invasion of bacterial pathogens –. For example, c-type lysozymes from crustaceans – and insects – displayed bactericidal activity towards both Gram-positive and Gram-negative bacteria. Moreover, invertebrate c-type lysozyme may also have anti-virus activity, for injection of recombinant c-type lysozyme could protect blue shrimp from white spot syndrome virus (WSSV) infection .
Until recently, only two c-type lysozymes have been characterized from the clam Cyclina sinensis  and the abalone Haliotis discus hannai . The antibacterial activity of abalone c-type lysozyme and its expression profile after bacterial stimulation have been studied. However, the function of c-type lysozyme from bivalve has not been reported so far. Additionally, the evolutionary mechanism of invertebrate c-type lysozymes was not well studied. In this study, a novel c-type lysozyme was characterized from M. galloprovincialis. The antibacterial activity, tissue-specific expression and temporal expression patterns post bacterial challenge were investigated. Besides, the evolution of invertebrate c-type lysozyme was also discussed.
Materials and Methods
Animals and Bacterial Challenge
The mussels (shell-length: 3.0–5.0 cm) were collected from a local mussel culturing farm and acclimatized in aerated seawater (32 psu, pH 8.0) at 20°C for 7 days before commencement of the experiment. No specific permits were required for the described field studies. The mussels were fed with a mixture of Isochrysis galbana and Phaeodactylum tricornutum, and the seawater was totally renewed daily.
After acclimatization, the mussels were randomly divided into three experimental groups with three replicates each containing 30 individuals. For the challenge group, 50 µL of live V. anguillarum (1×107 CFU/mL) re-suspended in sterilized seawater was injected into the adductor muscle of each mussel. For the control group, the mussels were injected with an equal volume of sterilized seawater respectively. The untreated mussels were employed as the blank group. The hemocytes and hepatopancreas of six mussels (two mussels for each replicate) from each group were randomly collected for RNA extraction at 6, 12, 24, 48, 72 and 96 hours post the challenge. The hemocytes, hepatopancreas, gill, mantle, gonad and adductor muscle of six untreated mussels were also sampled for total RNA extraction.
Total RNA Extraction, cDNA Synthesis and Cloning the Full-length cDNA
Total RNA was extracted according to the manufacture’s protocol (Invitrogen, USA) and cDNA synthesis was conducted as described previously . One expressed sequence tag (EST) sequence homologous to previously identified c-type lysozyme was identified from a hemocyte cDNA library (unpublished). The 5′ and 3′ ends of MgCLYZ were obtained by rapid amplification of cDNA ends using the SMART RACE cDNA Amplification Kit (Clontech, USA) according to the manufacture’s protocols.
The cDNA sequence and deduced amino acid sequence of MgCLYZ were analyzed using the BLAST algorithm (http://www.ncbi.nlm.nih.gov/blast) and the Expert Protein Analysis System (http://www.expasy.org/), respectively. The ClustalW program was used to conduct multiple alignments (http://www.ebi.ac.uk/clustalw/). Protein domain prediction was conducted using simple modular architecture research tool (SMART) software (http://smart.embl-heidelberg.de/). The signal peptide was predicted by SignalP 4.0 server (http://www.cbs.dtu.dk/services/SignalP/). The DiANNA server (http://clavius.bc.edu/~clotelab/DiANNA/) was utilized to calculate the disulfide connectivity. The secondary structure was predicted using the PSIPRED Server (http://bioinf.cs.ucl.ac.uk/psipred/) and the three-dimensional structure was predicted by SWISS-MODEL (http://swissmodel.expasy.org/workspace). A maximum likelihood (ML) phylogenetic tree based on the amino acid sequences was constructed using PhyML 3.0 . ProtTest version 2.4  was used to identify the best-fit model of amino acid substitution, and the WAG+I+G model was selected as the best using AIC. For ML analysis, 100 bootstraps were used to estimate the node reliability. The sequences used for multiple alignments and phylogenetic and evolution analysis were listed in Table 1.
Testing for Positive Selection
The open reading frame (ORF) nucleotide sequences encoding amino acids of c-type lysozymes from invertebrates were used to construct the neighbor-joining (NJ) phylogeny tree with Kimura 2-parameter model. The reliability of interior branches of each phylogeny was assessed with 1000 bootstraps. The phylogeny was used to estimate non-synonymous to synonymous rate ratio (ω = dN/dS) by CODEML program of the PAML 4.4 software package . Values of ω >1 indicate positive selection, while ω = 1 and ω <1 indicate neutral evolution and purifying selection. Likelihood ratio tests (LRTs) were used to determine whether any codon positions were subjected to positive selection.
The free-ratio model, which assumes a different ω parameter for each branch in the phylogenetic tree, is applied to test for detecting positive selection acting on particular lineages. The site-specific models M1a (nearly neutral)/M2a (positive selection), M7 (beta)/M8 (beta & ω) were used to test for selective pressure at amino acid sites. The Naive Empirical Bayes (NEB) method and Bayes empirical Bayes (BEB) method were used to calculate the posterior probabilities that each codon is from the site class of positive selection under models M2a and M8 respectively .
Tissue Distribution and Expression Profiles Post V. anguillarum Challenge
Quantitative real time RT-PCR (qRT-PCR) was carried out by using an ABI 7500 Real-time Detection System with the SYBR ExScript qRT-PCR Kit (Takara, China) as described previously . The comparative CT method (2−ΔΔCT method) was used to analysis the expression level of MgCLYZ . The β-actin gene of M. galloprovincialis was used as a reference gene , . The primers used to quantify the relative expression level of MgCLYZ were listed in Table 2.
The data were analyzed by one-way analysis of variance (one-way ANOVA, Duncan's post-hoc test) using SPSS 16.0 software (SPSS Inc., USA). The P values less than 0.05 were considered statistically significant.
Recombinant Expression and Mass Spectrometric Identification
PCR fragment encoding the mature peptide of MgCLYZ was amplified with two gene-specific primers (Table 2) with Nco I and Xho I sites, respectively. The PCR product was cloned into pMD18-T simple vector (Takara, China), digested completely by restriction enzymes Nco I and Xho I (NEB), and then subcloned into the Nco I/Xho I sites of expression vector pET-21a(+) (Novagen, Germany). The recombinant plasmid (pET-21a-MgCLYZ) was transformed into Escherichia coli BL21 pLysS (DE3) (Novagen, Germany). The recombinant proteins were expressed as inclusion bodies and purified by HisTrap Chelating Columns (GE Healthcare, USA) under denatured condition (8 mol/L urea). The purified rMgCLYZ was analyzed by SDS-PAGE with separation in a 15% gel followed by Coomassie brilliant blue R250 (CBB-R250) staining.
After SDS-PAGE, the target protein band was excised from the gel and cut into small pieces. The gels were processed and digested according to the method described by Katayama et al . The gels were washed three times with ultrapure water and decolorized with 25 mmol/L NH4HCO3 (in 50% v/v acetonitrile) at room temperature for 30 min. After being dried in 50% acetonitrile for 30 min and 100% acetonitrile for another 30 min, the samples were rehydrated in 10 µL cover solution (0.02 g L−1 w/v trypsin, 25 mM NH4HCO3 and 10% acetonitrile) for 30 min, and then covered with the same solution but without trypsin for digestion overnight at 37°C. The supernatants were extracted with 5% trifluoroacetic acid (TFA) in 67% acetonitrile at 37°C for 30 min, and then centrifuged at 5 000 g for 5 min. The samples which were completely dried were re-suspended with 5 µL 0.1% TFA followed by mixing in 1:1 ratio with a saturated solution of α-cyano-4-hydroxy-trans-cinnamic acid in 50% acetonitrile. One microliter of the mixture was analyzed by an ABI 4800 MALDI-TOF/TOF Plus mass spectrometer (Applied Biosystems, USA). Both the MS and MS/MS data were integrated and processed using the GPS Explorer V3.6 software (Applied Biosystems, USA) with default parameters.
Lysozyme Activity Assay
The purified rMgCLYZ was refolded in gradient urea-TBS glycerol buffer according to the method described by Yang et al . The concentration of purified recombinant protein was measured by BCA method . The optimal pH, temperature of MgCLYZ activity was determined using Micrococcus lysodeikticus as the substrate with the method described by Xue et al . The pHs ranging from 2 to 10, and the temperatures ranging from 10°C to 60°C were used. The measurements of lysozyme activity were done in triplicate and the results were shown as percent activity with the highest activity being defined as 100%.
Antibacterial Activity of rMgCLYZ
Two Gram-positive bacteria (Micrococcus luteus, Staphyloccocus aureus) and five Gram-negative bacteria (Vibrio anguillarum, Enterobacter cloacae, Pseudomonas putida, Proteus mirabilis, Bacillus aquimaris) were used in antibacterial test. The minimum inhibitory concentration (MIC) was determined according to the method of Hancock (http://cmdr.ubc.ca/bobh/methods/) as described previously . The plates with V. anguillarum and P. putida were incubated at 28°C for 24 h, and the plates with other tested bacteria were incubated at 37°C for 24 hours.
Sequence Analysis of MgCLYZ cDNA
The full-length cDNA sequence of MgCLYZ was deposited in GenBank under the accession no. JQ863366. The MgCLYZ sequence had an ORF of 462 bp encoding a polypeptide of 154 amino acids with the signal peptide comprising the first 24 residues (Figure 1a). The deduced mature protein had a predicted molecular mass of 14.4 kDa and a theoretical pI of 8.08. SMART program analysis revealed that MgCLYZ contained a lysozyme C/Alpha-lactalbumin domain (residues 25–150). The mature peptide of MgCLYZ possesses 10 Cys residues, of which, Cys 51 and Cys 141, Cys 84 and Cys 107, Cys 103 and Cys 121, and Cys 128 and Cys 154 were predicted to form disulfide bonds. As predicted by PSIPRED program, MgCLYZ had a secondary structure with three α-helixes and two β-sheets. The predicted three-dimensional structure of MgCLYZ was divided into two domains by a deep cleft containing the active site. One domain mainly consisted of the β-sheet structure, while the other domain was more helical in nature (Figure 1b).
The asterisk (*) indicates the stop codon. The start and stop codons are included in a box. The signal peptide and polyadenylation signal are underlined with solid line and dot line, respectively. The active catalytic residues are in bold and shaded in dark.
Multiple Sequences Alignment and Phylogenetic Analysis
Blast analysis revealed that MgCLYZ shared a high homology with lysozymes from the bivalve Cyclina sinensis (AEG19518.1, 64% identity), the mosquito Anopheles stephensi (AAO74844.1, 45% identity) and the insect Simulium nigrimanum (ACZ28238.1, 45% identity). The deduced amino acid sequence of MgCLYZ was aligned with other known c-type lysozymes and several conserved features were found in MgCLYZ (Figure 2). The two catalytic residues (Glu 56 and Asp 72) and seven Cys residues were conserved in MgCLYZ, and the motif -DYGI(L)FQINS(N/D)R(K)Y(W)WC- was also conserved among species . In addition, a short insertion sequences were observed in the bivalve lysozyme amino acid sequences. The sequence similarity and the common structure features suggested that MgCLYZ was a new counterpart of invertebrate c-type lysozymes.
The black shadow region indicates positions where all sequences share the same amino acid residue. Gaps are indicated by dashes to improve the alignment. The GenBank accession numbers and the species are shown in Table 1.
The phylogenetic tree of invertebrate c-type lysozyme (Figure 3) included two major clades: c-type lysozymes from insects and mollusks, and c-type lysozymes from arthropods (c-type lysozymes from vertebrates as an out-group). MgCLYZ was firstly clustered with c-type lysozyme from the bivalve C. sinensis, and then grouped with c-type lysozymes mainly from lepidoptera and diptera insects, further grouped with c-type lysozyme of Haliotis discus hannai.
Numbers at the forks indicate the bootstrap values (in %) out of 100 replicates. The sequences of c-type lysozymes from vertebrate animals (Scophthalmus rhombus, Bos Taurus, Homo sapiens) were used as an out-group. Bootstrap value <50 are not shown. The sequences used to construct phylogeny trees of c-type lysozymes are shown in Table 1.
Evolution Analysis of Invertebrate c-type Lysozymes
The log-likelihood values and parameter estimates of c-type lysozyme from invertebrates under branch models and various site models were shown in Table 3. The free-ratio model was used, which assumed a different dN/dS ratio (parameter ω) for each branch in the tree. The log likelihood value under this model was l1 = −8505.0. The one-ratio model, which assumed the same ω parameter for the entire tree, led to l0 = −8552.0. The M1 model was compared with model M0 to determine the existence of ω heterogeneity among the branches in the phylogeny. The M1–M0 comparison revealed that M1 was better fit to the data (2Δl = 94, χ2 = 86.66, df = 50, P<0.001), indicating the ω ratios were indeed different among lineages. The lineage-specific selection test showed that the ω values along the most (36 out of 51) examined lineages were less than 1. However, the ω values of many branches including some internal branches were more than 1, evidencing their evolution under positive selection (Figure 4). Maximum-likelihood estimates of parameters indicated that 71.5 nonsynonymous and 0 synonymous substitutions occurred along Bivalvia (B) branch (Figure 4), suggesting that the bivalve lineage undergoes positive selection. However, the ω ratio value for M. galloprovincialis clade was very low, implying no positive selection on this lineage. The Crustacea (C) branch and Lepidoptera (L) branch also had very high ω ratios (Figure 4), revealing that these c-type lysozymes are under positive selection pressure during evolution. In addition, there were also some branches which consisted of c-type lysozymes from different taxon with high ω ratios.
The number shown along each branch is the non-synonymous to synonymous rate ratio for the entire gene along that branch. The branches in red show strong evidence of undergoing positive selection. C – Crustacea branch, B – Bivalvia branch, L – Lepidoptera branch.
The site-specific models were used to test for heterogeneous selective pressure at amino acid sites. The M1a–M2a comparison revealed that M1a was better fit to the data (2Δl = 0, χ2 = 5.99, df = 2, P>0.05). LRTs also gave significantly better results for M7 (2Δl = 5.2, χ2 = 5.99, df = 2, P>0.05). These results suggested that all the amino acids were under nearly neutral selection detected by these models.
Tissue Distribution and Temporal Expression Profiles Post Bacterial Challenge
By qRT-PCR analysis, the MgCLYZ transcripts were detected in all the tissues examined, including hepatopancreas, hemocytes, muscle, mantle and gills (Figure 5a). No significant difference in the expression of MgCLYZ mRNA was observed in the examined tissues, indicating a wide tissue expression of MgCLYZ transcript.
The mRNA expression level is calculated relative to actin expression and shown as mean ± SE (n = 6). Significant difference from control is indicated with an asterisk at P<0.05.
The expression level of MgCLYZ transcript in hemocytes decreased at the first 12 h post challenge but then increased at the following times. The expression level reached a maximum value of 2.57-fold at 48 h post challenge, which was significantly higher than that of the control (P<0.05) (Figure 5b). In hepatopancreas (Figure 5c), the expression level of MgCLYZ mRNA did not change until 48 h following the challenge, but then was up-regulated significantly at 72 h and 96 h post challenge compared with the control (P<0.05).
Protein Recombinant and Mass Spectrometry Identification
The rMgCLYZ was detected by SDS-PAGE and visualized as a protein of about 14 kDa (Figure 6a, Lane 5). One peptide fragment (–NQGVPDSDLR–) identified by MALDI-TOF/TOF was identical to 14–23 of the mature peptides of MgCLYZ (Figure 6b), and the other peptide fragment (–HESNFHYDAIGTNSGSK–) matched 31–47 of the mature peptides of MgCLYZ (Figure 6b).
(a) SDS-PAGE analysis of rMgCLYZ. About 5 microgram recombinant protein was loaded and the 15% gel was visualized by Coomassie brilliant blue R250 staining after electrophoresis. Lane 1: negative control for rMgCLYZ (without induction); Lane 2: induced expression for 4 h of rMgCLYZ; Lane 3: induced expression for 5 h of rMgCLYZ; Lane 4: protein molecular standard; Lane 5: purified rMgCLYZ. (b) MALDI-TOF/TOF identification of the peptide (peptide A: –HESNFHYDAIGTNSGSK–; peptide B: –NQGVPDSDLR–) of rMgCLYZ.
Lysozyme Activity of rMgCLYZ
The lytic activities of rMgCLYZ were detected at pHs ranging from 2 to 10 (Figure 7a). The rMgCLYZ had the highest activity at pH 4 and a relatively high activity at pH 5. The lowest activity was detected at pH 2, which was only about 14 percent of the highest activity. The high lytic activity of rMgCLYZ was found at temperatures ranging from 20 to 40°C and the optimal temperature for rMgCLYZ lysozyme activity was 20°C (Figure 7b). At the temperature above 20°C, the activity of rMgCLYZ decreased with the increasing temperatures and reached to the minimum value at 60°C.
Lysozyme activity is shown as % of the highest activity. The values were shown as mean ± SE (n = 3).
Antibacterial Activity of rMgCLYZ
The spectrum of antibacterial activity of rMgCLYZ was investigated against several Gram-positive and Gram-negative bacteria (Table 4). The rMgCLYZ possessed a relatively strong lytic activity against M. luteus, V. anguillarum and P. putida, while it had a weak antibacterial activity against S. aureus, E. cloacae, P. mirabilis and B. aquimaris. The highest activity of MgCLYZ was found against M. luteus with a MIC of 1.76–3.51 µM. Thus, rMgCLYZ might be a broad-spectrum antibacterial protein.
In the present study, the cDNA sequence of a novel c-type lysozyme was characterized from mussel M. galloprovincialis. MgCLYZ possesses a typical c-type lysozyme domain containing the conserved residues (Glu 56 and Asp 72) essential to catalytic activity . Unlike eight conserved Cys residues in most c-type lysozymes, only seven Cys residues were conserved in MgCLYZ. However, four disulfide bonds were predicted to form in MgCLYZ, which were critical to the maintenance of structural stability . In addition, MgCLYZ contains an Asn 83 residue in a position where there should be a conserved Trp residue in the signature motif of “-DYGI(L)FQINS(N/D)R(K)Y(W)WC-”. It has been proposed that the conserved Trp residue in chicken and human c-type lysozyme is involved in substrate binding. The change of this residue may influence the binding specificity and efficiency of MgCLYZ toward the substrates –. The c-type lysozymes are classified into two different subfamilies, including the calcium-binding and conventional non-calcium-binding families . Due to the absence of calcium binding Asp residues at positions 112, 117 and 118 , MgCLYZ was suggested as a new member of the non-calcium binding family.
Compared to vertebrate and arthropoda c-type lysozymes, mollusk counterparts have not been well characterized. Presently, only one c-type lysozyme from gastropod and two c-type lysozymes (including MgCLYZ) from bivalve have been reported –. In addition, we have characterized two c-type lysozymes in manila clam Ruditapes philippinarum recently (data not shown). Therefore, the bivalves may have the same diversity of c-type lysozyme as other lineages. However, analysis of complete genome sequences available in NCBI showed that c-type lysozyme was absent from Crassostrea gigas, suggesting that lineage-specific gene loss might occur during the evolution. In addition, c-type lysozyme are also absent from the phylum of Echinodermata and Urochordata . In the Mollusca phylum, i-type and g-type lysozymes have been reported previously. Consequently, all three types of animal lysozymes had been found to coexist in mollusks . Our study suggested that M. galloprovincilias was the first species in which i-, g- and c-type lysozymes coexist.
The phylogenetic analysis indicated that the bivalve c-type lysozymes were closer evolutionarily to c-type lysozymes from insects than gastropod and crustaceans. This might be explained that the c-type lysozymes from different invertebrate phylum have evolved under different selection pressures to adapt different environments and diverse pathogens. Therefore, the phylogenetic relationship of mussel and abalone based on c-type lysozymes was not quite consistent with traditional taxonomic classification.
Studies have shown that host genes involved in immunity are frequently subjected to positive selection during evolution . The typical examples include major histocompatibility complex (MHC) class I  and α-defensin . In the present study, although the ω values along the most (36 out of 51) examined lineages were less than 1, suggesting a common effect of functional constraint, the bivalve, lepidopter and crustacean lineages had very high ω values indicating that these lineages undergo positive selection during evolution. This result suggested that the c-type lysozymes might have been subjected to the positive selection since mollusk and this selection was remarkably variable among lineages. The heterogeneity in the evolutionary rate of invertebrate c-type lysozymes indicated that c-type lysozyme might undergo ecological adaptation in a complex species-specific manner . It has been reported that the digestive c-type lysozymes from ruminants had evolved under positive selection pressure and six residues were found to undergo adaptive changes for digestive function . However, our study showed that the bivalve c-type lysozymes perhaps underwent positive selection although no positive selected sites were detected.
In invertebrate animals, the tissue-distribution profiles of c-type lysozymes are species-dependent. It had been reported that shrimp c-type lysozyme transcripts were mainly expressed in immune organs or organs exposed to external environment, such as hemocytes and gills –, –, , . In insects, many c-type lysozymes which were also called salivary lysozymes were mainly expressed in salivary glands of fruit fly, mosquitoes, termite and moth larvae –. Some c-type lysozymes were also highly expressed in midgut and fat body of mosquito and housefly , . In abalone, the transcript of c-type lysozyme was found to be mainly expressed in mantle . In contrast, MgCLYZ mRNA was widely expressed in all the examined tissues. This result suggested MgCLYZ might serve as a universal hydrolase against the bacteria in these tested tissues.
Expression profiles of c-type lysozymes post bacterial challenge had been investigated in many invertebrate animals. In this study, the expression level of MgCLYZ was significantly increased in hemocytes and hepatopancreas post bacterial challenge, indicating a role for MgCLYZ in the innate immune system of the mussel. Similar results have also been found in abalone, shrimp and mosquito , , , . For example, the transcripts of c-type lysozymes were up-regulated post M. luteus and V. alginolyticus challenge in shrimps , . In the mosquito Anopheles gambiae, lysozyme c-1 and c-2 transcripts increased significantly at 6–12 h post challenge with bacteria . These results suggest that c-type lysozymes are immune responsive and involved in the immune responses of the invertebrates.
Previous studies showed that most avian and insect c-type lysozymes had antibacterial activities only against Gram-positive bacteria , . However, some insect lysozymes also possessed lytic activities against Gram-negative bacterium Escherichia coli –. Recently, several shrimp c-type lysozymes demonstrated strong lytic activities against both Gram-positive and Gram-negative bacteria, especially several Vibrio species such as V. alginolyticus and V. parahemolyticus , –, . In abalone, the recombinant c-type lysozyme also showed bacteriolytic activity against both Gram-positive and Gram-negative bacteria . In this study, MgCLYZ was found to display lytic activities against several Gram-positive and Gram-negative bacteria, providing the evidence of the involvement of c-type lysozyme in mussel immunity. Our results support the idea that marine invertebrate lysozymes have a wider range of activities than those of terrestrial invertebrates in order to cope with a great range of bacterial strains and species in the marine environment .
The optimal pH for the activity of mammal and chicken c-type lysozymes was generally ranging from 7 to 10 . In crustacean, the recombinant tiger shrimp and kuruma shrimp lysozyme had optimum activity at pH 6.0 and 7.5, respectively , . In the present study, it was found that rMgCLYZ had high activities within a narrow acidic pH ranging from 4 to 5. Similar results were also found in some ruminant and fish c-type lysozymes , –. Furthermore, rMgCLYZ exhibited high activities in the range of 10–30°C, which demonstrated that mussel c-type lysozyme was a low-temperature active enzyme. Similarly, some c-type lysozymes from marine shrimp and fish also had optimal temperatures in the range of 20–40°C , . In marine environment where the temperature usually ranged from 0 to 30°C, so MgCLYZ could adapt to function in this temperature range . Our findings are in agreement with previous deduction that cold-blooded aquatic animals possess cold-active lysozymes for protection from bacterial invasion in a wide range of environmental circumstances .
In conclusion, a novel c-type lysozyme was characterized from M. galloprovincialis. The expression profiles post bacterial challenge, enzymatic property and antibacterial spectrum analysis suggested that MgCLYZ was involved in the host defense reaction. Further analysis indicated that the evolution of bivalve c-type lysozyme was obviously under positive selection. Our findings showed for the first time that c-type lysozyme played important roles in the innate immunity of M. galloprovincialis, and invertebrate c-type lysozymes probably had evolved under positive selection in a species-specific manner.
Conceived and designed the experiments: JZ HW. Performed the experiments: QW CW LZ. Analyzed the data: QW CW. Contributed reagents/materials/analysis tools: HW JZ CM. Wrote the paper: QW.
- 1. Söderhäll K (1999) Invertebrate immunity. Dev Comp Immunol 23: 263–266.
- 2. Loker ES, Adema CM, Zhang SM, Kepler TB (2004) Invertebrate immune systems-not homogeneous, not simple, not well understood. Immunol Rev 198: 10–24. doi: 10.1111/j.0105-2896.2004.0117.x
- 3. Mitta G, Hubert F, Dyrynda EA, Boudry P, Roch P (2000) Mytilin B and MGD2, two antimicrobial peptides of marine mussels: gene structure and expression analysis. Dev Comp Immunol 24: 381–393. doi: 10.1016/s0145-305x(99)00084-1
- 4. Song L, Wang L, Qui L, Zhang H (2010) Bivalve Immunity. In: Soderhall K, editor. Advances in Experimental Medicine and Biology – Invertebrate Immunity. New York, USA: Springer. 708: 44–65. doi: 10.1007/978-1-4419-8059-5_3
- 5. Zhao J, Song L, Li C, Zou H, Ni D, et al. (2007) Molecular cloning of an invertebrate goose-type lysozyme gene from Chlamys farreri, and lytic activity of the recombinant protein. Mol Immunol 44: 1198–1208. doi: 10.1016/j.molimm.2006.06.008
- 6. Jollès P, Jollès J (1984) What's new in lysozyme research? Mol Cell Biochem 63: 165–189.
- 7. Callewaert L, Michiels CW (2010) Lysozymes in the animal kingdom. J Biosci 35: 127–160. doi: 10.1007/s12038-010-0015-5
- 8. Herreweghe JM, Michiels CW (2012) Invertebrate lysozymes: diversity and distribution, molecular mechanism and in vivo function. J Biosci 37: 327–348. doi: 10.1007/s12038-012-9201-y
- 9. Daffre S, Kylsten P, Samakovlis C, Hultmark D (1994) The lysozyme locus in Drosophila melanogaster: an expanded gene family adapted for expression in the digestive tract. Mol Gen Genet 242: 152–162. doi: 10.1007/bf00391008
- 10. Kaizu A, Fagutao FF, Kondo H, Aoki T, Hirono I (2011) Functional analysis of C-type lysozyme in penaeid shrimp. J Biol Chem 286: 44344–44349. doi: 10.1074/jbc.m111.292672
- 11. Hikima S, Hikima J, Rojtinnakorn J, Hirono I, Aoki T (2003) Characterization and function of kuruma shrimp lysozyme possessing lytic activity against Vibrio species. Gene 316: 187–195. doi: 10.1016/j.gene.2003.12.020
- 12. de-la-Re-Vega E, Garcia-Galaz A, Diaz-Cinco ME, Sotelo-Mundo RR (2006) White shrimp (Litopenaeus vannamei) recombinant lysozyme has antibacterial activity against Gram negative bacteria: Vibrio alginolyticus, Vibrio parahemolyticus and Vibrio cholerae. Fish Shellfish Immunol 20: 405–408. doi: 10.1016/j.fsi.2005.06.005
- 13. Ye X, Gao FY, Zheng QM, Bai JJ, Wang H, et al. (2009) Cloning and characterization of the tiger shrimp lysozyme. Mol Biol Rep 36: 1239–1246. doi: 10.1007/s11033-008-9303-7
- 14. Supungul P, Rimphanitchayakit V, Aoki T, Hirono I, Tassanakajon A (2010) Molecular characterization and expression analysis of a c-type and two novel muramidase-deficient i-type lysozymes from Penaeus monodon. Fish Shellfish Immunol 28(3): 490–498. doi: 10.1016/j.fsi.2010.01.003
- 15. Ren Q, Zhao X, Wang J (2009) Molecular characterization and expression analysis of a chicken-type lysozyme gene from housefly (Musca domestica). J Genet Genomics 36(1): 7–16. doi: 10.1016/s1673-8527(09)60002-3
- 16. Wang WX, Wang YP, Deng XJ, Dang XL, Tian JH, et al. (2009) Molecular and functional characterization of a c-type lysozyme from the Asian corn borer, Ostrinia furnacalis. J Insect Sci 9: 17. doi: 10.1673/031.009.1701
- 17. Mai WJ, Wang WN (2010) Protection of blue shrimp (Litopenaeus stylirostris) against the White Spot Syndrome Virus (WSSV) when injected with shrimp lysozyme. Fish Shellfish Immunol 28: 727–733. doi: 10.1016/j.fsi.2010.01.002
- 18. Pan BP, Song X, LuoKY, Ge DY, Gao WW (2010) Expression of lysozyme gene in Vibrio anguillarum-chanlleged Cyclina sinensis. Oceanologia Et Limnologia Sinica 41(6): 901–906 (in Chinese with English abstract)..
- 19. Ding J, Li J, Bao Y, Li L, Wu F, et al. (2011) Molecular characterization of a mollusk chicken-type lysozyme gene from Haliotis discus hannai Ino, and the antimicrobial activity of its recombinant protein. Fish Shellfish Immunol 30: 163–172. doi: 10.1016/j.fsi.2010.10.008
- 20. Wang Q, Wang X, Wang X, Yang H, Liu B (2010) Analysis of metallotionein expression and antioxidant enzyme activities in Meretrix meretrix larvae under sublethal cadmium exposure. Aquat Toxicol 100: 321–328. doi: 10.1016/j.aquatox.2010.08.012
- 21. Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696–704.
- 22. Abascal F, Zardoya R, Posada D (2005) ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21(9): 2104–2105. doi: 10.1093/bioinformatics/bti263
- 23. Yang Z (2007) PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol 24: 1586–1591. doi: 10.1093/molbev/msm088
- 24. Yang Z, Wong WSW, Nielsen R (2005) Bayes empirical Bayes inferences of amino acid sites under positive selection. Mol Biol Evol 22: 1107–1118. doi: 10.1093/molbev/msi097
- 25. Wang Q, Zhang L, Zhao J, You L, Wu H (2012) Two goose-type lysozymes in Mytilus galloprovincialis: possible function diversification and adaptive evolution. PLoS One 7(9): e45148. doi: 10.1371/journal.pone.0045148
- 26. Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25: 402–408. doi: 10.1006/meth.2001.1262
- 27. Canesi L, Negri A, Barmo C, Banni M, Gallo G, et al. (2011) The organophosphate Chlorpyrifos interferes with the responses to 17β-estradiol in the digestive gland of the marine mussel Mytilus galloprovincialis. PLoS One 6(5): e19803. doi: 10.1371/journal.pone.0019803
- 28. Katayama H, Nagasu T, Oda Y (2001) Inprovement of in-gel digestion protocal for peptide mass fingerprinting by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun Mass Spectrom 15: 1416–1421. doi: 10.1002/rcm.379
- 29. Yang J, Wang L, Zhang H, Qiu L, Wang H, et al. (2011) C-type lectin in Chlamys farreri (CfLec-1) mediating immune recognition and opsonization. PLoS One 6(2): e17089. doi: 10.1371/journal.pone.0017089
- 30. Smith PK, Krohn RI, Hermanson GT, Mallia AK, Gartner FH, et al. (1985) Measurement of protein using bicinchoninic acid. Anal Biochem 150: 76–85. doi: 10.1016/0003-2697(85)90442-7
- 31. Xue QG, Schey KL, Volety AK, Chu FLE, La Peyre JF (2004) Purification and characterization of lysozyme from plasma of the eastern oyster (Crassostrea virginica). Comp Biochem Physiol B 139: 11–25. doi: 10.1016/j.cbpc.2004.05.011
- 32. Wohlkönig A, Huet J, Looze Y, Wintjens R (2010) Structural relationships in the lysozyme superfamily: significant evidence for glycoside hydrolase signature motifs. PLoS One 5(11): e15388. doi: 10.1371/journal.pone.0015388
- 33. Vocadlo DJ, Davies GJ, Laine R, Withers SG (2001) Catalysis by hen egg-white lysozyme proceeds via a covalent intermediate. Nature 412: 835–838. doi: 10.1038/35090602
- 34. Hultmark D (1996) Insect lysozymes. In: Jolles P, editor. Lysozymes: Model Enzyme in Biochemistry and Biology. Basel, Switzerland: Birkhauser Verlag. 75: 87–102. doi: 10.1007/978-3-0348-9225-4_6
- 35. Maenaka K, Kawai G, Watanabe K, Sunada F, Kumagai I (1994) Functional and structural role of a tryptophan generally observed in protein-carbohydrate interaction. Trp-62 of hen egg white lysozyme. J Biol Chem 269: 7070–7075.
- 36. Muraki M, Harata K, Jigami Y (1992) Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme. Biochemistry 31: 9212–9219. doi: 10.1021/bi00153a014
- 37. Nitta K, Tsuge H, Sugai S, Shimazaki K (1987) The calcium-binding property of equine lysozyme. FEBS Lett 223(2): 405–408. doi: 10.1016/0014-5793(87)80328-9
- 38. Zhu S (2008) Positive selection targeting the cathelin-like domain of the antimicrobial cathelicidin family. Cell Mol Life Sci 65: 1285–1294. doi: 10.1007/s00018-008-8070-x
- 39. Yang Z, Nielsen R (2002) Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. Mol Biol Evol 19: 908–917. doi: 10.1093/oxfordjournals.molbev.a004148
- 40. Lynn DJ, Lloyd AT, Fares MA, O’Farrelly C (2004) Evidence of positively selected sites in mammalian a-defensins. Mol Biol Evol 21: 819–827. doi: 10.1093/molbev/msh084
- 41. Shen T, Xu S, Wang X, Yu W, Zhou K, et al. (2012) Adaptive evolution and functional constraint at TLR4 during the secondary aquatic adaptation and diversification of cetaceans. BMC Evol Biol 12: 39. doi: 10.1186/1471-2148-12-39
- 42. Prager EM (1996) Adaptive evolution of lysozyme: changes in amino acid sequence, regulation of expression and gene number; in Lysozymes: model enzymes in biochemistry and biology (ed.) P Jollès (Basel: Birkhäuser Verlag) 323–345.
- 43. Mai WJ, Hu CQ (2009) Molecular cloning, characterization, expression and antibacterial analysis of a lysozyme homologue from Fenneropenaeus merguiensis. Mol Biol Rep 36: 1587–1595. doi: 10.1007/s11033-008-9355-8
- 44. Kylsten P, Kimbrell DA, Daffre S, Samakovlis C, Hultmark D (1992) The lysozyme locus in Drosophila melanogaster: different genes are expressed in midgut and salivary glands. Mol Gen Genet 232(3): 335–343. doi: 10.1007/bf00266235
- 45. Moreira-Ferro CK, Daffre S, James AA, Marinotti O (1998) A lysozyme in the salivary glands of the malaria vector Anopheles darlingi. Insect Mol Biol 7(3): 257–264. doi: 10.1111/j.1365-2583.1998.00067.x
- 46. Li B, Calvo E, Marinotti O, James AA, Paskewitz SM (2005) Characterization of the c-type lysozyme gene family in Anopheles gambiae. Gene 360(2): 131–139. doi: 10.1016/j.gene.2005.07.001
- 47. Fujita A, Minamoto T, Shimizu I, Abe T (2002) Molecular cloning of lysozyme-encoding cDNAs expressed in the salivary gland of a wood-feeding termite, Reticulitermes speratus. Insect Biochem Mol Biol 32(12): 1615–1624. doi: 10.1016/s0965-1748(02)00100-5
- 48. Liu F, Cui L, Cox-Foster D, Felton GW (2004) Characterization of a salivary lysozyme in larval Helicoverpa zea. J Chem Ecol 30(12): 2439–2457. doi: 10.1007/s10886-004-7944-0
- 49. Ren Q, Zhao X, Wang J (2009) Molecular characterization and expression analysis of a chicken-type lysozyme gene from housefly (Musca domestica). J Genet Genomics 36(1): 7–16. doi: 10.1016/s1673-8527(09)60002-3
- 50. Mai WJ, Hu CQ (2009) cDNA cloning, expression and antibacterial activity of lysozyme C in the blue shrimp (Litopenaeus stylirostris). Prog Nat Sci 19(7): 837–844. doi: 10.1016/j.pnsc.2008.10.008
- 51. Fujimoto S, Toshimori-Tsuda I, Kishimoto K, Yamano Y, Morishima I (2001) Protein purification, cDNA cloning and gene expression of lysozyme from eri-silkworm, Samia cynthia ricini. Comp Biochem Physiol B 128(4): 709–718. doi: 10.1016/s1096-4959(00)00368-7
- 52. Abraham EG, Nagaraju J, Salunke D, Gupta HM, Datta RK (1995) Purification and partial characterization of an induced antibacterial protein in the silkworm, Bombyx mori. J Invertebr Pathol 65: 17–24. doi: 10.1006/jipa.1995.1003
- 53. Yu KH, Kim KN, Lee JH, Lee HS, Kim SH, et al. (2002) Comparative study on characteristics of lysozymes from the hemolymph of three lepidopteran larvae, Galleria mellonella, Bombyx mori, Agrius convolvuli. Dev Comp Immunol 26: 707–713. doi: 10.1016/s0145-305x(02)00027-7
- 54. Ye X, Zhang L, Tian Y, Tan A, Bai J, et al. (2010) Identification and expression analysis of the g-type and c-type lysozymes in grass carp Ctenopharyngodon idellus. Dev Comp Immunol 34(5): 501–509. doi: 10.1016/j.dci.2009.12.009
- 55. Wei S, Huang Y, Cai J, Huang X, Fu J, et al. (2012) Molecular cloning and characterization of c-type lysozyme gene in orange-spotted grouper, Epinephelus coioides. Fish Shellfish Immunol 33(2): 186–196. doi: 10.1016/j.fsi.2012.03.027
- 56. Yu LP, Sun BG, Li J, Sun L (2013) Characterization of a c-type lysozyme of Scophthalmus maximus: Expression, activity, and antibacterial effect. Fish Shellfish Immunol 34(1): 46–54. doi: 10.1016/j.fsi.2012.10.007