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PeTMbase: A Database of Plant Endogenous Target Mimics (eTMs)

Fig 1

Workflow diagram followed to construct PeTMbase.

Raw data sets from diverse public databases were incorporated to extract the biologically relevant information. Sequence libraries were downloaded from SRA database, and known lncRNA sequences retrieved from non-coding RNA databases. MiRNA binding sites within lncRNA sequences were identified with a custom R script, and flexible and user-friendly interfaces were developed diverse scripting languages and web technologies.

Fig 1

doi: https://doi.org/10.1371/journal.pone.0167698.g001