Self-Folding of Naked Segment 8 Genomic RNA of Influenza A Virus
Fig 3
RNAstructure5.3 predicted probability of nucleotides being paired (colored lines) or single stranded (colored circles) in vRNA8 self-folding.
Probability lower than 50% is not colored. The partition function calculation incorporated restraints from strong reactivity of DMS, consensus basepairs from sequence and structure analysis and SHAPE reactivities converted to pseudo-energy.