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BioAssemblyModeler (BAM): User-Friendly Homology Modeling of Protein Homo- and Heterooligomers

Figure 3

Minimum sequence identities in ProtCID clusters of common interfaces between identical Pfams (A) or different Pfams (B).

The minimum sequence identity for each pair of domains in the same interface cluster using both FATCAT and transitive alignment via the Pfam HMM(s). For Pfam pairs, the minimum of the two Pfams was used in the density estimate. Same-Pfam clusters may contain homodimers and/or heterodimers that belong to the same Pfam domain family.

Figure 3