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BioAssemblyModeler (BAM): User-Friendly Homology Modeling of Protein Homo- and Heterooligomers

Figure 2

Minimum sequence identity within Pfam domain families identified in PDB structures with PDBfam.

Kernel density estimates of the minimum sequence identifies are shown for a total of 3730 Pfams. The sequence identities were determined by alignment of pairs of PDB sequences to the same HMM (curve labeled HMM) or by structure alignment with the program FATCAT.

Figure 2